Gene
Gene Model ID | aug_v2a.20933 |
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Locus | scaf13340 : 9556 ... 13000 : + |
To GenomeBrowser | scaf13340:9556..13000 |
Genes list of scaffold | scaf13340 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 9-5 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 9-1. This gene model contains zf-CCHC, RVP and rve domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.20933.t1 | gi|390351191|ref|XP_003727599.1| | PREDICTED: uncharacterized protein K02A2.6-like [Strongylocentrotus purpuratus] | 0.0 |
Transcript
Transcript ID | aug_v2a.20933.t1 |
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Definition | - |
>aug_v2a.20933.t1 ccgattgatgagacaagctgatttttgcggttttagcggtacaagagacactcaagtgagagaccaactcatcgaagaat gtttgtcgacaaaactgcgactaaagcttcttgaaaaagtaacaacctgaccttagatgttgctcttaagatgtctagtt gtcatgaatcagtaacccaacaggcaaacgaaatgcagctcgacaatgtccataaaatcgatttcaaacgcagtagccgt gtcaagacggggaacaaactgcgtggccccgctcaccgcaggcaacccaataaaacaggaaatgagaagaactgttggaa atgcggaagagaaggccatttatccaaagatgattgctgtcctgtgagaaaagagaagtgcagaaagtgtggtattattg gacacttcgctaaagtgtgcagaagtaaagatagccatcaaaatagagtcttcagcgttaatcaaagagatgcaaatatg gcgtctcctgccatgaggaacgaaagctcagagaatgaaatatttacaataaaccttacaccagaggaggagcctcaagt tgagattactgtcggtggccaggaagttaatgtgttaatcgactcaggtgcctcatgtaatgttattgatcaacagttat gggaacagctcaaacagaaagaagctgtttgcaaaagtcaggcagtaaacaagaccctcaagtcttatggaacggttagc aaagtcgaagtcatagcgaaattctggtccaaagcggaattaggagtcaaatccctaacaggtgttgaatttcttgtcat aaaaggcaaaggtaggcctattcttggaaggaaaacagcaatgaagcttggggtgttgaagatcaccataccagaagtca acctagtggaggatgagttccaagacctgttcagcgagaagataggaaaactgacaaattatgaggttgaattgcatctt aagccgaatgccaagtttgtggcccaaccatgcagacgaaacccttatagccaaagaagaaaagtggaaaagaagcttac ggaactagaggagatggacatcatcgagagggttgaaggtccaacaccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngag ctacgaagggccatccaaaccgggaagtgggaaggagtgaaattttctgagtatctacctgtagctaatgaactgtgtgt cgtcggtggaatagtcatgagagcaactagaatagtaattccaaagaacctcagagcaacagtattgaccattggacatg aaggacacttaggtgttgtgagtatgaaacagcgactgcgcacaaaggtgtggtggccaaagttagagaaggacgtggag aagtttgttagaacatgtgacggatgtcagttagcaagtagaccagacccccaccgaccccttgaaaagtacagagttac ccgaaggacattggaaagctgtggcagtagactatctgggacctgtacccttaggtgagcacgtactgggtgtggtggat tattacagccgatactatgagactgatgtcgtaagaacagtgacatcacagcaaactattaatagcttagaagcaatatt cgccaggcatggactgccagaagtgctaaccagtgacaacagaccaaactttgtgtcagaagaattcaaagcttacttga aagagagtggaattaaacatcgacgtgtaacagcaaagtgggcccaagcgaacggtgaagtcgaaagacaaaacagctct atactgaaacgactgaggttggcacacgctgaaggaaaggattggaaaagagaacttgtgaagtacatggcagtgtaccg aacaacccctcgccatacaacaggaaagacaccagcatttctcttaatgggccatcatctaaggacaaagctaccccacc tatcacaaccggtgcacggtgatgaagaaacaagagacagggctaaagccatgaaattcaagagcaagcagtagaagagg aatgccaggactagcgatgtgcaaccagatgacatcgttcttttgaaacaagagaagagaaacaagttgtctactacatt tggga |
Protein
Protein ID | aug_v2a.20933.t1 |
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Definition | - |
>aug_v2a.20933.t1 MSSCHESVTQQANEMQLDNVHKIDFKRSSRVKTGNKLRGPAHRRQPNKTGNEKNCWKCGREGHLSKDDCCPVRKEKCRKC GIIGHFAKVCRSKDSHQNRVFSVNQRDANMASPAMRNESSENEIFTINLTPEEEPQVEITVGGQEVNVLIDSGASCNVID QQLWEQLKQKEAVCKSQAVNKTLKSYGTVSKVEVIAKFWSKAELGVKSLTGVEFLVIKGKGRPILGRKTAMKLGVLKITI PEVNLVEDEFQDLFSEKIGKLTNYEVELHLKPNAKFVAQPCRRNPYSQRRKVEKKLTELEEMDIIERVEGEHVLGVVDYY SRYYETDVVRTVTSQQTINSLEAIFARHGLPEVLTSDNRPNFVSEEFKAYLKESGIKHRRVTAKWAQANGEVERQNSSIL KRLRLAHAEGKDWKRELVKYMAVYRTTPRHTTGKTPAFLLMGHHLRTKLPHLSQPVHGDEETRDRAKAMKFKSKQ* |