Gene
Gene Model ID | aug_v2a.21174 |
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Locus | scaf13659 : 448 ... 2730 : + |
To GenomeBrowser | scaf13659:448..2730 |
Genes list of scaffold | scaf13659 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 67 |
Description | This gene model contains RVP_2, DUF1758 and Peptidase_A17 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.21174.t1 | gi|339234082|ref|XP_003382158.1| | putative integrase core domain protein [Trichinella spiralis] | 0.0 |
aug_v2a.21174.t1 | gi|339262354|ref|XP_003367447.1| | Pao retrotransposon peptidase superfamily [Trichinella spiralis] | 0.0 |
aug_v2a.21174.t1 | gi|339265395|ref|XP_003366177.1| | Pao retrotransposon peptidase superfamily [Trichinella spiralis] | 0.0 |
aug_v2a.21174.t1 | gi|645018149|ref|XP_008205870.1| | PREDICTED: uncharacterized protein LOC103316054 isoform X3 [Nasonia vitripennis] | 0.0 |
aug_v2a.21174.t1 | gi|339255916|ref|XP_003370701.1| | zinc knuckle protein [Trichinella spiralis] | 0.0 |
Transcript
Transcript ID | aug_v2a.21174.t1 |
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Definition | - |
>aug_v2a.21174.t1 actgggacagccatgctggttgcaggcaatgtccagagagcacctgtgagggttttgtttgactcaggaagccaaaggtc ttatatcaccaagagagttgctgagtcattggcccttgatggaccttctgaagtccttagtgtatccgtgttagggggag aagccagtcaaacgaagcgaatgaagagagtcagtttctcactcacctctgttcaagaaagtatttcaaagccagttagc atggaggccctcaccattgacaagatttgcacaccactggaaccagtggagatcagtttagaaaattaccctcacctgca gagcttgatacttgctgactcgtaccctcgtggaccagttaacgtcgatattttgataggagcagacttttacttctcat ttatgagtggtaaatacaagaaaggggaaaacgctcaagctcccaccgcagtggagtcaacactaggatggattgtagga ggacccattgagggtcttccttgcaataacactcaatccatgctgtctactgtgcggattgacccagtcacggacaccct caagcagttttgggagctggaatctatcggaattgtcgataaaggggatgctcatatgtccttagaagaagaagagtccg ttagacagttcaacgagggactgaagtttgatggtgaacgttatgaagtaccgctgctatggaaaagtgatgctccgccg ctgaagtcaaactacctccaggcagtcaagagacttgagggtgaggaaagacagcttagaaggaacgcagagagagccaa tgcctacaaggatgctatcaaccaatatgtagaaagggggtttgctgtagaagtaaaggaagcagctgatggtaatgaga atgtcaggcatttacctcatcacgcagtcttccgagaggacaagaaaacaacaaaatgccgtgttgtttttgatgcttca gcctctgatgagcatgaggtatctctcaacgactgtatcctgtcagggccagtgcttcaacctaatctagtatcagtact acttcgtttcagaacgtaggattgcacttatggctgatgttgaaaagatgttcctccagatcaaggttgacgaaagagac caagacgctctacgaaatctgtggggggatttaaagagtgacgaaccaccaagagtatacaaggtgcagaggttggcatt tggtgttatttgtagtccattcctggccattgccacagtttaaagccacgcaaagaaatgcagcaaagagttccctgatg catcaagagaagtcctgtcaaacatgtacgtggatgactgccttagtggtgcggacaacgttgaagctgcggtgaaattg cagcagtccttagacaagatgatggaacgaggtggatttaatctgactaagtgggccagtaattcaagggaagtccttag ccacattgcagagcaaaagcaagcagaggccagtacccttgacttcaatgcaagtgagccgctcaaggcactggggatat gttggaatacattaactgactgttttctcttcagcgtatcatcaagtatgcttgctgttagtgacccgaaaacgaagaga agcctgttgagcattgcgtcaagggtttttgacccaatgggactaatcacaccatttacaatcagggcaaaaatgttgtt ccaagaactttggcagagaggtttacagtgggaggaccggttggatgaagatattgctgatcagtggatgtcgtggaaat cagaactttcacagctaagttgcatcaccattccccgctatttcatgggaaacatcaaatcaagttccagcatagaactc cacggctttggtgacgcttcacctgcggcgtacggtgcggcagtcttcatcaagtgcgtgggtgaagccggccatgcatc aatgcatcttgtaatgtctaaatcaagggtggcgcctgcaaagactgtgtcatttccaagactggagttacttgcagctg ttgtcgatgcaagattgctgaagttcgttgcagaatccctaacgctcaaggtagaccgggtagtgtgctggactgacagc atggtaacgctccagtggatcagaggttcaagcagccagtggaagacattcgtagcgaatcgtgttgctgaaattcagtc cacatgggacccacagatttggaaacactaatcaggggaggacaatcctgctgacttactgacgcgtggattgcctnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn |
Protein
Protein ID | aug_v2a.21174.t1 |
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Definition | - |
>aug_v2a.21174.t1 TGTAMLVAGNVQRAPVRVLFDSGSQRSYITKRVAESLALDGPSEVLSVSVLGGEASQTKRMKRVSFSLTSVQESISKPVS MEALTIDKICTPLEPVEISLENYPHLQSLILADSYPRGPVNVDILIGADFYFSFMSGKYKKGENAQAPTAVESTLGWIVG GPIEGLPCNNTQSMLSTVRIDPVTDTLKQFWELESIGIVDKGDAHMSLEEEESVRQFNEGLKFDGERYEVPLLWKSDAPP LKSNYLQAVKRLEGEERQLRRNAERANAYKDAINQYVERGFAVEVKEAADERRIALMADVEKMFLQIKVDERDQDALRNL WGDLKSDEPPRVYKVQSVSSSMLAVSDPKTKRSLLSIASRVFDPMGLITPFTIRAKMLFQELWQRGLQWEDRLDEDIADQ WMSWKSELSQLSCITIPRYFMGNIKSSSSIELHGFGDASPAAYGAAVFIKCVGEAGHASMHLVMSKSRVAPAKTVSFPRL ELLAAVVDARLLKFVAESLTLKVDRVVCWTDSMVTLQWIRGSSSQWKTFVANRVAEIQSTWDPQIWKH* |