Gene
Gene Model ID | aug_v2a.21395 |
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Locus | scaf13976 : 2098 ... 10067 : + |
To GenomeBrowser | scaf13976:2098..10067 |
Genes list of scaffold | scaf13976 |
Manual annotation
Study field | Flagellum |
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Gene name | Adi-Trp17 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Mus musculus short transient receptor channel 1 (NP_035773). |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.21395.t1 | gi|634890281|ref|XP_007954133.1| | PREDICTED: short transient receptor potential channel 5 [Orycteropus afer afer] | 8.0e-29 |
aug_v2a.21395.t1 | gi|734643601|ref|XP_010750794.1| | PREDICTED: short transient receptor potential channel 4 [Larimichthys crocea] | 1.0e-28 |
aug_v2a.21395.t1 | gi|657583573|ref|XP_008295900.1| | PREDICTED: short transient receptor potential channel 4 [Stegastes partitus] | 1.0e-28 |
Transcript
Transcript ID | aug_v2a.21395.t1 |
---|---|
Definition | - |
>aug_v2a.21395.t1 agcttttaaagattgcttttgtcgctcctgttgccaccaaggtggaccaaattgctggaaattctttcagcagtggttcg agcatccttactacaagtttgtcaaccacactacttggtacgtggcttttcttgctctcttgtacgcttgctcatttcat ggtcaggacacccttgaaggaacttggacgggattagatggcatcggtaagaaatacccggtatcctttagcctaatgtc aaagatatcgcattattgataaaatccaactagtggtctatcatcaatgctgcgttctgattggttgagctactagtagg ctatatgttatagcccactagaagcgaaaagcgcccgccatatttgtaatgttttggcggtaacaaaggattgatgtcta gctttaacttgcgaaagatgtttagtctcgataattttttgaccaactagttggacatggcctctgagtcaatagcccat tcggccttcggccttatgggctattgactcatagcccatttgggctcgaggaataattgttaaatatccaattaacgttt tatgggagtaaaaaaggagtcatgcatagatgttcatataaatctacggtcgcaacgtgactcattttatgtagtattct ggtgaaaactcgacccttctctcagagtcaccaaatatttgttgttctaaactgccgcatttaacgcactccttccacct gtagtaactcacttccatggcacatttaaagagtcttagccatccaatatgcattgcgcgcatctattattgtttttatc cggggtttcgtttcaacttattccatgtatgggcaagaacgaacaccgcggacgcgacaggaacattttgtcatcaatag tggaggtcatggatgtcagcgaatgcgaggaagatctcgatatttagtggaaatctgtctgagggtggtcaagtggaggt gattgcatacggatctcctctcgcagcgctggatagagcgcatgatatcgttcgaggcggcgaagcactagtcgtcaccg atgaaaacattgttcgcgtggtataaagtacaaagaggattttcgtgctgttttaagagtttctttaatattttgttttc tataatatggctcatcctaaaatcttttaggtttgttgctataagaatacatacagaagaaagaaatctgcaaggttcac gggttgtccatgcttgaatgaaaatcgcaagtattacacgaactgttcttgcggaacgaagaaagccgtctgcaaaaaca aggcagaagaaggacaagagattagaaatcctttcaggcacatgtatacacatcaaatgatataacagtttctgctgtga ctacatgcaaaaaaatatttcctatatattccatttcaatgtgaatattcctgcacagcaattcatacgaggatgataaa tactttgcattagcttagacgtgactgaaaataagacacagaaaaacacatcacatgcatacagtctttcaaatcacgcc gttataaaggcgaactatacattcaactgaaaatataaagcaattgtacgtagcaatgcacaattttttatcattacaat cgaagagcttacctctatggctgtcttcgtgttcaatgttgtcgggtctaggggatggnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntccat gcataatccgggcttccttgcattgatttcaaagatcataggtagactgtctaagtttcaaccgtctcatgccttgtggc cttcaaggacgccacattacgagttgagacgattacaacgcttcttcatctgattcttcaaatcaactcgatagcgcgtt aaaacttataaacgtcctcaaatatccatgcaaaatgcatgtaggatgatcccagatattatttttgtgaaaaatgagcc tgttttgtcctgttattaaccgatgaaaccggattccttgtagatatcgataaattccacactttcgggggccctgaaaa tggcgactgatcgtatctaagcgcgcaatgcacattggatgggtaagactctttaacagtcttttgatgaatttgtctcg gagaaagagaaacttgaacaccgcggccaaacgtctgccctacacgcgagctaatttcctgcgcaaaattgtattggaaa agatcggaagaaactagttgttagtgtcattgaactctgtaaaaggaaaagtacttacgcaaaaggaaaccttaagactt tccgaacactccgcttattaatttacgggtattctgttgatttaccattttgtttagagctttaccaaaaaagctacgta tgtgtttaaaacaccgggtcacgctgaggatttacttttatttggtgtttgcaaactttagccagctttcatggtagacg cttttcagtgtagcaaagtatcaattgtgggcagtgactatgtcctatagtcgtagttttagtaagacggtcaccatttt tgtaatcttgacagaaagcaataccgagattgtccttgtttcctttccagaccgtgttgtactggcctttgtgttgggtt ttcttgtacaagaagtcgttgctgtcagtagggagggatttcacgtctacaagtccaaatggtggaatgttgttgattca ttgatcatcttggcctttgtggtgtcttatgttacatggtactcaggaaataaatggaatccagaaaacgttacattcgt cgttgcagatgtcatcttttcaagcgccatcgttatgtctttctttcacttgacacatatcttccaggttggtgatcaat taatagtgagggtcttttttccatgtttttgcttaataataaatataatggtgtagtttgcacacgttgcgcaccagcgt cattccctatagcttcatcacggcggaggttacttacctgtattttttgtctttgattctgtttatgtctttgattcagt ttatatctatgtatcttgttctgtacgtggtacctacattctctggaataatttcttgccatctatttcgctgtgttggt tttaattacgcatttccggtctcgtttaatatttagtctcataatttgggaataaatttaattccatctctataacacaa attggagttttacaacgattgagagaaccctggctatgttgctgaagaaaatttagtatcacattaacgtagttgtgcaa ttttagaaacgacattacttgatcactagagtttcaataattccaaaactcataagcgatttgagtaaagagtagcatga aaaaggaaaattatcttttcaatattacttgaagctagtttttttagcttctggcctctctgagttgagttagagaggtt ccttcttgttcgaaaaattgctgaaattgacaaataccgaaaggggaaaaagactggacaagaacatcaaatgcatgtga ttaggtccaagctgaattcttcttaataaaggcggaaagtggtacatagagatttacacttgtttttctgctgggttgtg ttttcctattttagaccatgtgatttttctcaagggaactgtttccttcgcatttcgtgttgtgcatgaaaagacaaaag ggaaattcacttgagaaggacacgtggtctgaaatgggaaaataaaatatacaagccaaaaaggactgttccctaagtca gggatcacattttgtgcagaggaagtttagtatccttgtgaaggatattatcagaaggataaaaatgatctaaaaacgaa aagagcacagctggtttagccgaaaagtgaaataacggataaaggcaatattttaaaagacgctctctcttagcccatgg atgaccttgtcaggtcatgaggtataagtgttgatggtgaatttcagtcactcagcctgttatnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnggtttttttcatcagcgccgagtttccgacatatttgggtcgttcttttcgtttt agagtggctatttttgtgtactcaaggagcaaagtttgtggaagacaccgtggtttaatcatttcaaaatcaaaacggat gtcacctgatgttgaagtaaaggaggaagaaaaaagggaaaattcttgacgctgatcaaagttgacttgaatattatttc gtgcatctaagaacctgctttaaattttttctagtttgggaaagggaatagccagtgccatttctcgcagtactgacggg cagatggagagtacaaattcaacagagccattcccccttcctgtgacgaaattcaccaccggcccctaccattttatgac gcggaagccaatttttttttctgggagttttgtcgagattttatgctcatacaggcatacattctcttatactaatacag agagctgatccctttcttgatgcctagcgaatctctagactctcttatcagtgtggatctcttttctctttttgtgcagg tgaactcagtcctcggtcctttgcagctttcgttgtacagaatgctgaacgatgtgtttcactttcttctgttatttctt gtactttacctatcttttgccaccggactggccaagatttacaggtactacgttgcatcgcagcttgaactgaaaaaacg aaatgagacgcaccatgaagaaacgcatccttacaccaggtgagaatactcgcttgatcgcaagcatttgaccactgatc gacaccattaagagcttcagtaacgacagcagcacatcacggaaaacgttatttgacagtatgactttgcgcaaaattga atatttagcgattcttgcatgttgtttacgttgtgtaacgtagaagaagtttccaataactgaaattcatgactcgaata atctgttcgctacaaagtatccgctgcgttgatagctagaaaggctcttttgtaaatgatcatagatttcttgtccttga gtaaaacctatggtcgcgtgcggcttggctgtgtccgtaggtctcagtcaggagtgtgtgattgtgtatatgctttccga tcatgtgatgattttttatgcttgctagtcattggaacgtactaaatggcctgttttggctgcttcttggaaattacgat gaggagaaagtaagggtaaaagattctgatttttggacaacatctatatgtggccatattttcatgattgtgtacgttat ctgcatggtgattgtggctctcaacatgttaatcgccatgatgaacaattcctttcaaagatgcatggtgagtatactga ctcctcccttactatgctataataatttttgaggctcaatggcaggaaatatcataaacctaggtttgtggcatccatca caatgtacttgagagagtctttagagtctcattaagagtacttactttccccaacaaggtggtattctggaattataatg ttaatgatgattgataataattaccattgtaataattaacaattattcaccgaagtggaggtgaatagtggttgatattc gaggtaaatatccaccactattcaccgacactgaggtgaataattgttttagcatataccacacaagttgaataaatggc ggaccaaagagtaactttatttggaaaaaggcttattcagcggtggacttctcaggtgtcgatccagggctgcccgaata gcggtgagcgatttcaatggtaaaatgttccgtctcgccttcttgccgacaaataaaacttttgcaggcaattgttaaat tgctgcggcgtcattttctcaatgattgagttgaattcctcttgttgttgaaaccaatctgaaaaacatcagatgtttca ttgttttcattgtgattttagtgctcgactgttttcgtaaacaaggcattgtattttgatttttcgatattaaataactt accgttaaatactgttacaccaaactttgttgctatttttgtgtttttcggtacagcctcctcgttcattgaaagaattt cgttttgggaaatcgaagcgaaaatggaacccattttgtttctcttcggctgctcggaggtgaatagtacttggataagc acctccgggctagccaatcagcgcgcgccaaaagcactattcacttgtgtggtatatactaattttggttattatcatga ttatttaagacaaatttatttgtgctcgttttgcgcttacgaacgagttatgacgatgaccgttgcttaaacttgatgac cctgtgtccggggtattaagcaaaattgaagtgatatcttgtcgtctttttagagttgagttgtgagagtttatatttat taacctaccaatgtcattgaaactttaacttcagtaaatctctgtccgcggnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtgattctcatgacacgtaaaacaaac cgttgttgcctctgccactgcagctgtcaaaaggtaaggattgaacttttctctcacaaaacgtattaattaatacaaga atattggcaacctgtttttttcaatgacgcgggctttgtttttccatcactccaagaaagtgattgccaacctttagtga cttggtcggtataatatcgattccgcacagaaaaatgtgtgcccgccctgaaaacacttacgacctctatgcacaagctt ctacttcgaatgtgatccgttagacttctacaaagtttgaatctactttcaatcttgtcattgctaacagagaggactgt gcatgtaatgttagtgcaataagctagacccgaaattcgaaaaaacacagcctcatttacaattgttacctagcaaatgc agtgaacgacttatcgcgtttgtatggacaaattatcactcgctcgattaccgttaacattattgtgttctcagtccctg acgtctttgaaaggtccgcgcctaagtaacaaaaatgcctcactattcaaactgcatttgttcttattagaaaaatgatt tcaattacggtatggcagtcagctaaattccatttttaattaattggaattgaagcattggttaataattttatgtccat tgcattctccgtttccaactaatgatgatcgacttgtacgaaaagagcttgaatactaccgaatatccatattcatcaca ctttttcacactaccttatcattttttagggaagcggatattttgaaggacaagaggtaggtagactgtttaactaaaac ctggactcgaagacttcatccaaaatggtggctagtgctatgtttacaacttatattttatacgtgtcaaacgtttgtga atgttgttccactaaagaacgataaatgttttgtctggtaaactcgattaacaattaaaatcaaagtgaggtgtgttaat tatctgaaatcccttttcgtacaggaaatatttcaaaaacggttgaagacaatgaaaagactggtggtgaaatttcttga agatcgctacacatgggatggaaaagaagtagaaggcaataaagaagatctgaggcaagagctggcaaagatttcctcgg atatggctacgctttgtaaaagaatagaaagtatttctaagcagtgaggccctgtcatttagcagaagagatttattttt ggctattcaaaagttactctagattaatgaaatgaatgctctatttagga |
Protein
Protein ID | aug_v2a.21395.t1 |
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Definition | - |
>aug_v2a.21395.t1 AFKDCFCRSCCHQGGPNCWKFFQQWFEHPYYKFVNHTTWYVAFLALLYACSFHGQDTLEGTWTGLDGIDRVVLAFVLGFL VQEVVAVSREGFHVYKSKWWNVVDSLIILAFVVSYVTWYSGNKWNPENVTFVVADVIFSSAIVMSFFHLTHIFQVNSVLG PLQLSLYRMLNDVFHFLLLFLVLYLSFATGLAKIYRYYVASQLELKKRNETHHEETHPYTSHWNVLNGLFWLLLGNYDEE KVRVKDSDFWTTSICGHIFMIVYVICMVIVALNMLIAMMNNSFQRCMGSGYFEGQEEIFQKRLKTMKRLVVKFLEDRYTW DGKEVEGNKEDLRQELAKISSDMATLCKRIESISKQ* |