Gene
Gene Model ID | aug_v2a.21423 |
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Locus | scaf14005 : 1770 ... 8097 : + |
To GenomeBrowser | scaf14005:1770..8097 |
Genes list of scaffold | scaf14005 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-37 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains Glycos_transf_1, NB-ARC and NACHT domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.21423.t1 |
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Definition | - |
>aug_v2a.21423.t1 agattgatagcacattggttggataagccactccttattgacatgtttcttgatggcatctaatgtgagccagcctcaag aacacgataccggtcatggctccaggaaactccaagtcaccatcttggcttctgaatggggttccagtaaaggggggcta tccaccataaacagagagttggccattcaattagccagattttctgatgttgaagttaccttctttttgcccaaatgctc cgatgaagacatgaaagcaggtgctagccatggtatttccattcttgaggcaaggagacgacctggtttcaatgagctgg actcactttgctttccgccggagaatttgaggatagatgtggtcgttggtcatggagtgaaacttggtcgccaagctcaa attatccgaaattctcacaaatgtaagtgggttcaagttgtacacactgacccagaggaattgggaatgttcaaatgtta tgagaatcctatctcaacaggagaagaaaagcatcaggttgaggtagagctatgccagatggctgattttgttgtaggag ttggacctaagctggctgaagcctttcgcaaataccttggcttttgtaaaaaacacgaagatgtttttgaattcacccct ggtatttttgacgacttttcgagtgttcaacaagttcctgaggaaagaaaacagtgcagtgtgttggtgtttgggcgtgg agatgataaagattttaagctgaaggggtttgacattgcagcaaaatctgttgctgccttgtctgacactgttcttgttt tcgtgggagcacccgacagaaaacacgaggagattgcaaaacgttttgttgattttgggattcctaaaaagcgtcttagg gtgaaaggttacatgaatagccgagaaagtctgaagcagttattttgtcgggtggatcttgtgctgatgccgtcaagaac agaggggtttggcttgacagggctggaagctctgtcagctgggcttcctgtgattgtcagcaaaaactcaggttttggag aagcactgggcagtgtacattctggctcttattttgtcattgactctgaagatcacagtgcatggatagcggtcatgaaa gaagtgtggaacaaaaacagaagggcacgacttgatgaggttaaggctctgcgaggttcctatagtgaaagatacagttg gtataaacagtgcaagtcccttattgaaaagatgtctgaacttgttgatggtatgaactacttttagattctcctaactt attgattaaattggtaaaattgaagtaatttgcaccctaagcaaaatgtatcattccaaagtatctttttgataataact gaaaatattgataagtaaattatttaaacagaaacaagtgcatgttgaaaacaaatatcgtagtcaacatgtaaggctgt cgatgggacacgttttgtaagaaatttgattagtgatgtagctcaccatcgattggtaatttgtaagtaatgtttgcggg tatgcaaagaagcccagttgaaaaatattattaacaataaaggctaaaatggaacttaaagtgcccatgaagcgaaattt tttattatcatatttgaaagagctttcaagatgatgaagaatagcgtttattttattgggatagcactcttggttgccga gttattcaacattttgatttttgcaaattagatgacttgtgacgtcattttgtggacacaaagtgatgtaaaataataaa atatggaatatctgtgcaagtactaagtttacagagtttatgtgctgcaggaactacacattatgatagtggttatgatg tcaccatagcaacatactcgttaccagacctctaccttcctaaaatgaaaactgccttctttaattctccagagtttaac acattttcttttgcttgtgctgtgtaatgtccgtatttgctcacacccactgaatgaacaacaagatcaaataacacttc ttgatgaaggaaaactctgattttcctctttgaatggagagggcctggagcccactgtgttgccatggaaatgtcacaga ggacatatcatggaactttgtgacgagtgtaacaactgtggttgtagtttcagctcttttcagaaaacgttgtgagagag atctttgtgtccacaaaatgacgtcacctgtgagattgtgctgcacactgctcttccatcagggctatgaacatctagga gttgatcaaatgcaaactcagtgttttaccccacactgagcgagtgaggacaaataactcatagaagtacgttgtatgaa gtgtcatgcgcggaagaatttgaaatttgcgatgatttctccaacatcatacattttctatgtacacgatgttaacataa gaaattcgcggatcgaaaggaatgaaaagagtatggtcctcgcaggttttttaagcctcccaaactcgtgacggaaaaat ccctccattaaatcgcccctccgaatataggcccccggggccaaatataagttccccaacaaacaagcccctcaaatggg cctgtgaaaaatattagccctgggacatattttgggaattttacggtatgttacatgtcttgaatagtgttcgtccacag gggaagtttcccttaaaaaaggtagcttttatgctttacaaagcttttgctctttacggaacttgatgcagttcttagaa attaatatttgaagttttctgtaacatacaagcacttctgtagtcttttacaaatataaattcacattgtgttctatgca gtgtcatttctacctaggtttaacatcttttctccgcaggcatttcttcatgtgttccacccaaaaggaaacgtcgaatt gaaaagaatgagattgagcagccagcaggtacactccccgaaatgcagcaatgaaattggttagggttagggttagttga ataatcagtgtcgtttgaaaggaactttatgtccattttatatatagctttgtcttctgtgcagagcttcgtaaaccaat tgaaattgagacaaaatctccagcaaaaatacatgttttatttatcccatacagaatgtgcagttacattcaaggctctt ctgaataaacctttttcttaaaatcatcgaaacttgatatattgaaaaatgaatatgttacattttaaagtaactgatct gattacgagtgttctgattgatcaaaagtctatggtttgttgtacatgcgaactcgaacctattcataattggctgtcac gtgtcgtgtgatgaacggaaagagaagttaaacctttatcactttattaagaaaaatggtttttaataaatcttttctgc agctcgtacttcgtgtccaagccacgtcatagaatggatacggggagtttgccagaagcgtgaaggggtgattttgccag ttccttggtgtgaagagttcagctttcacatagaggacattttcaccagacttaggttagttgaaggagaaaagacacgc ggaatagggacctcaaaagaagtcaccagcataacaagtatcttcacacctcgcgaaggtggcgaacaaccactgattgt tttgattgaaggcgaacctggcgtgggaaagacaacctgttgccgaaagctggtgtttgattgggcaagcaaacaaagtc acgaatgggacgagtcttttccaagaattgatgtgctgctcttcctcagatgtcgtgaaatcaaatctacgctcttggac gctattgaagatcaaattctgccagcagaaattgagctggaggaaaagaaaatgtttttccagttcttggaagaaaatcc tgccaaggtgttgcttgtgctcgatgggttagatgaggcagacccacaaacactggaaatgtgcctgaaacttattaaaa gggagcagcttcctagctgttacattgttctcacatctcgccatgaagcggggagtatagtgaggccgtacaccgacaca ttgttagagattggatttacaacaactgatgtggagcgttacataagaaggcattttcaacacggggaaaacttggcaga ggaacttattgcaaaacttcttgttgataaggatttaagagaactaacacaaaaccctttaaacactcttctgctctgtg ttatcttcgaggagctagagggagttctaccaagcaacaggacggagctttacgtggagattgttctctgtattttgaga cgttttgcaagtaagaacggtttgtcagatggaggtaaagaccttttattagtttacaagaaggaactgatgatcctagg ggaaactgcgctagactctctgtataaacaagagatgtatttcgatgatcacaaaggggatatgagggaaagtttgtcga tgaagtttgggtttgtgtcaatccagtctggcgctagcaagagagctccttgtgaccgttacggatttttatgcaagagt tttcaagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttggtgatgagggagcaaa ttcacttgctcaggctctcagagtaaacacctctctttcctctttgaatttggtgtccaattccattggtgctgatggag caaattcacttgctcgtgccctgagggaaaactcctctctttcttctttggatttaaggtccaattccattgatgctgag ggagcaattaaatttgctcaggccctcagagtaaacacttctcttttttttttggatttgcgttgtacttccattggttc tgagggagcaaaaaaacttgatcactatatcagagtaaatccctttcgttcttctttggattttcgtttcaattccgatt tatacttgactcgaatggctcgtaaatgacgtgtgtgatacgtaatattccaaaaacgaatgaaaatattttatcagggt ttcgaagcatgaggaggcacctaaaagcacgaatcgaaaggccgagttattttattgttttcgagtgtttggaaagcctg ataaaacacgaagcataagttttttgaaatggcttcttaattggtatccaattgcaagaaagggatgttatacacgtgaa cattaaggttttgctttcttttgtttaattatcaagtagcttgtgatgaaaaatactcccatgtttattatgtcaaagat tgaagcctggatgaattgagtgaaagagaagtgcaatgtactttgtagtttactcttcctttctttacaataaaatgtca aaatccca |
Protein
Protein ID | aug_v2a.21423.t1 |
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Definition | - |
>aug_v2a.21423.t1 MASNVSQPQEHDTGHGSRKLQVTILASEWGSSKGGLSTINRELAIQLARFSDVEVTFFLPKCSDEDMKAGASHGISILEA RRRPGFNELDSLCFPPENLRIDVVVGHGVKLGRQAQIIRNSHKCKWVQVVHTDPEELGMFKCYENPISTGEEKHQVEVEL CQMADFVVGVGPKLAEAFRKYLGFCKKHEDVFEFTPGIFDDFSSVQQVPEERKQCSVLVFGRGDDKDFKLKGFDIAAKSV AALSDTVLVFVGAPDRKHEEIAKRFVDFGIPKKRLRVKGYMNSRESLKQLFCRVDLVLMPSRTEGFGLTGLEALSAGLPV IVSKNSGFGEALGSVHSGSYFVIDSEDHSAWIAVMKEVWNKNRRARLDEVKALRGSYSERYSWYKQCKSLIEKMSELVDG ISSCVPPKRKRRIEKNEIEQPAARTSCPSHVIEWIRGVCQKREGVILPVPWCEEFSFHIEDIFTRLRLVEGEKTRGIGTS KEVTSITSIFTPREGGEQPLIVLIEGEPGVGKTTCCRKLVFDWASKQSHEWDESFPRIDVLLFLRCREIKSTLLDAIEDQ ILPAEIELEEKKMFFQFLEENPAKVLLVLDGLDEADPQTLEMCLKLIKREQLPSCYIVLTSRHEAGSIVRPYTDTLLEIG FTTTDVERYIRRHFQHGENLAEELIAKLLVDKDLRELTQNPLNTLLLCVIFEELEGVLPSNRTELYVEIVLCILRRFASK NGLSDGVACDEKYSHVYYVKD* |