Gene
Gene Model ID | aug_v2a.21477 |
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Locus | scaf14069 : 4336 ... 9271 : + |
To GenomeBrowser | scaf14069:4336..9271 |
Genes list of scaffold | scaf14069 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-39 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains VirE, NB-ARC, and NACHT domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.21477.t1 |
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Definition | - |
>aug_v2a.21477.t1 aaaagatggttaaacttgttgacggtatgaatcacatttacattgtactatcttgttgattgaattggtaatttttaagt aatgtgcatccaatacaaaatgcaatattcctaagtagtgttttgataataactgaaaatgttggtagctaaattatttg tacacaaataagttcatttgtaagaaatttgattagtgattagctcacccggatcataatggcattatgagtgactggta ttacagatctcataggactgatctgcacctcgaactacggggcatttttcagctgttcctccacccatggccaagaaaac atctgatgttaagcatttaaattttcttaacttaataggaacttcctctgagccagagatcacagcacaggcaatggaag caagggagcagaagaggaataaggacttcacaaatatacaaggtgatggttcaaagtttgaagctcgtaaattagtggta tgctattcctgatcatcccaaactaagaggggaaagttagttaggacattggatgcctgaattacaatcctttaacggcc aataattacttaaatgagattcttgtaagtacctttcgctaacggcattgtaaaggggagaaagattatttaacaagatg gtacatgaacagataaaacttcattatcaatattcaattttccttattatgagaagacttgcttgcttatttgtatgata aaagagagaccattgcatggaaatgagtaacgtttgcaggtatgcaaggaagcccagttgaaaaataatactaacaataa aggctaaaatgggacttaagcccatgacctgtgagattgtgctgcacaccatcagggctatgaacatctaggaattgatc agttttgaacccacactgagtgagtgaggacaaataactcatagaagtaccttgtatgaaatgccatacacggaagaatt tgaaatttgcgatgatctctccaacatcatacatttatctatgtagatgatgttaatataagaaattcgcggatcgaaag gaattgaaagagtatggtcctcgcagtttttattggtggttaagtggaagcgagaaagggctgaacattcagttaaaact gttcaggcctttctcgctactaaaaagtacaagaatcataaactgaaaatttccatcataaatttgtatacgtacaattc cgaaaataagcccctccaaataaaagactccgaaactcgtaacggaaagaaccctccattaaatcgcccctccgaatata agccccgggggcttatacttggaattgccctcaaatacaaaaagaaaacgaaaacaaaagcagtatggtagcatataatt tttttatttgccttccgactataagctaacccgatcgattttgtgacgtacatttccctctgtatgtaagcgccgccgaa tataagtccctcaacaaataagcccctcagaagggcctttgaaaaatataagccccggggcttattttgggaattttacg gtatttaatatttcatgaatcgtgttcgtcctccggggaagtttcccttaaaaaaggcagcttttacgctttacaaaact tttgcgccttacgaacttgatgcagttcttagaaagtaatatttaaagttttcagtaccatacaagcatttctgtagtct gttacaaatgtaaattcacatgtgttctatgcagtgtcattttttaccgagggttaacatattttgtccgcaggcctttt ttcatgtgttccacccaaaaggaaacgacgaattgaaaagaatgagattgagcagccagcaggtacactcctcgaaatgc agcaatgaaattggttagggttagggttagttgaataatcagtgtcgtttgaaaggaactttttgtccatcttatttata gctgtgtcttctgagcagagcttcgtaaacccattgaaattgagacaaaatgtccaggaaaaatacatgttttacttatc ccatacagaatgtgcagttacattcaaggctcttccgaatacccatttgtcttaaattcagcgacccttgccatattgaa aaatgaatatgttatattttaaagtaactgatcagattacgagtgttctgattgatcaaaagtctatggtttgttgtaca tgcgaattcgaacctgttcataattggctgtctcgtgtcgtgtgatcaacggaaagagaagttaaaccttgatcacttta tgaaagaaaatatagttttaataaatcttttctacagctcgtacttcgtgtccaagccacgtcatagaatggatacgggg agtttgccagaagcgtgaaggggtaattttgccagttccttggtgtgaagagttcagctttcagatagaggacattttca ccagacttacgatagttgaaaaagaaaagacacgcggaatagggacctcaaaagacgtcaccagcatggcaagtatcttc acaccacgcgaaggttgcgaacaaccactgattgttttgattgaaggcgaacctggcgtgggaaagacaacgtgttgccg aaagctggtgtttgattgggcaagcaaacaaagtcacaaatgggacgagtcttttccaagaattgatgtgctgctcttcc tcagatgtcgtgaaatcaaatctaccctcttggacgctattgaagatcaaattctgccagcagaaattgagctggaggaa aagaaaatgtttttccagttcttggaagaaaatcctgccaaggtgttgcttgtgctcgatgggttagatgaggcagaccc acaaacactggaaatgtgcctgaaacttattcaaagggagcagcttcctagctgttatattgttctcacatctcgccatg aggcggggagtatagtgagaccgtacaccgacacattgttagagattggatttacaacaactgatgtggagcgttatata agaaggcattttcaacacgggcaaaacttggcagaggaacttatttcaaaacgtcttgttgataaggatttaagagaact aacacaaaaccctttaaacactcttctgctctgtgttatcttcgaggagctagagggagtattaccaagcaacaggacgg agctttacgtggagattgttctctgtattttgagacgttttgcaagtaagaacggcttgtcagatagaggtaaagacctt ttattagtttacaagaaggaactgatgatcctaggagaaactgcgctagactctctgtataaacaagagatgtatttcga tgatcacaaagggtatatgaaggaaaggttgtcgatgaagtttgggtttctgtcaatccagtctggcgctagcaagaggg ctccttgtgaccgttacagattttttcacaagagttttcaagaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnattggtgatgagggagctaattcacttgctcaggccctcagagtaaacacct ctctttcctctttgaatttggtgtccaattccattggtgctgatggagcaaattcacttgctcgtgccctcagggaaaac tcctctctttcttctttggatttaaggtccaattccattggtgctgagggagcaattacatttgctcaggccctcagaaa aaacatctctctttttttgttggatttgcgttgtacttccattggttctgagggagcaaaaaaacttgatcactatatca cagtaaatccctttcgttcttctttggattttcgtttcaattccgatttgtacttgacttgaatggctcgtgaataacgt gtgtgatacgtaatattccaaaaacgaatgaaaatattttatcagggtttcgaagcacgaggaggcacctaaaagcacga atcgaaagaccgagttattttattgttttcgagtgtttggaaagcctgataaaacacgaagcataagttttttgaaatgc cttctcaattggcgtccaattgcaagaaagggatgttatacacgtgaacattaagtttttgctttcttttgtttaattat caagtagcttgtgatgaaaaatactcccatgtttattttgtcaaagattgaagcctggatgaattgagggaacgagaagt gcagtgtactttgtagttcacttttcctgtctttacaataaaatgtcacaatccca |
Protein
Protein ID | aug_v2a.21477.t1 |
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Definition | - |
>aug_v2a.21477.t1 MEAREQKRNKDFTNIQARTSCPSHVIEWIRGVCQKREGVILPVPWCEEFSFQIEDIFTRLTIVEKEKTRGIGTSKDVTSM ASIFTPREGCEQPLIVLIEGEPGVGKTTCCRKLVFDWASKQSHKWDESFPRIDVLLFLRCREIKSTLLDAIEDQILPAEI ELEEKKMFFQFLEENPAKVLLVLDGLDEADPQTLEMCLKLIQREQLPSCYIVLTSRHEAGSIVRPYTDTLLEIGFTTTDV ERYIRRHFQHGQNLAEELISKRLVDKDLRELTQNPLNTLLLCVIFEELEGVLPSNRTELYVEIVLCILRRFASKNGLSDR VACDEKYSHVYFVKD* |