Gene
Gene Model ID | aug_v2a.21957 |
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Locus | scaf14675 : 13386 ... 18879 : + |
To GenomeBrowser | scaf14675:13386..18879 |
Genes list of scaffold | scaf14675 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 2-13 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 2-1. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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enzymatic polyprotein endonuclease reverse | GO:0003824 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
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aug_v2a.21957.t2 | gi|688554828|ref|XP_009299725.1| | PREDICTED: thy-1 membrane glycoprotein isoform X1 [Danio rerio] | 0.0 |
Transcript
Transcript ID | aug_v2a.21957.t1 |
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Definition | - |
>aug_v2a.21957.t1 atgcctttagtgtccgatactcttgatgctttgaatggaactaagtatttttctacccttgatttaaaatcgggttattg gcaaattgaaatgcacccagagtctcgagaaaaaacagcgttcgtgacacacaacggtctttacgaatttaatgtcatgc cgtttggtcttaccaattctggcgctagttttcagcgtctcatgggccatatacttcgagggctagagtacagatttgct ttgatttacatcgatgatatcgtgatcttttccaaatcaatcgaagagcacttgacccacttagaggaaatttttagaag attgcgtgacgcaaatgtgaaattgaacccggagaagtgcagctttgtaaaacaacgaattgtgtatccaggtcatgttg tgactccagagggtattttccctgaccctagtaaagtagaagtcgtgaagaatttcccaacgccagcgagtcttaaagaa ttgaagagttttctgggtttagctaattattaccggcgtttcattaaaggtttctcagaaattgcaagtccacttaatgc gttaacgaagaagggcgttaagtttttttggtctgagttgtgtgccaatgcatttgatcggttgaagcgtgctttaattt cagctcctgttttggtgtttcccgatttcgaggagcagtttttactttatgttgatgctagttcaaccggtatagggttc gcccttgcacaagttcaggacggtaaggaagtggtaatcgcttttaatggaagaggccttaaccaggcagaacgcaatta tacaacaacagagagggaagcactcgctttagtcgagggtatcaaaaaattccagccgtatttgcattatcacaaattcg tggtgtacacagatcatagttctcttcgtgggcttatgaacgttaaagatgctactggtcgattggcgagatgggctttg ttgcttcatcgtccaggttgccagaatggtaacgctgatgctttatcaaggcgcccatatccaaccaccaacttgaaccc cttacagcagagtgatccagagatcgaaaagatctctgaaaaacagcgcaaagatccagagttgagtgaaataatagatt atatccagcatgacagtttgcccagcaacgatgcaaaagccaggagaattctgctaaggagcgattgtttttacatcagt caagacggtttgttgtatcatctcgatcgtagccagaagcttagtgctcgcgatagtttttcccaactcgtggttcctca gtcaatgaagtacgaaattttgtcccatgtacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcttgatgttaaatttctgccaccagctgccgacgacctctcgacttc agttttagatcatcgcaagcgcattgtcgaaaaagtggaattagctcagaatctagctcgtgaaaatatacagcgttcac agcagaaaatgaaagaatactacgatcgtaatgcaagtcaaccgctttttgaaatcggacaacgtgtttgggtttacacg ccaaaaacgaagaagggtctatcaaagaagttgttgtataattggtttggtccatatagaattgttgagcagtcgtctcc cgttcaataccgtttgcgttctaaaagtaacaagaaagttactttcgctgtccatgctaatcgaatgaagccttttgtcg atcctgctttgagaccaatcgaaccaccgagtaacaatgacccgagtgaaccgtatttagatgaatcagacattcctgca gattccttcgaatctagccagtcacatagccataacagcgacacaagcgttacaataggccatttctgaattaccgttag cctcttcttcaaagcgagtcctggtgctcatcctttcatatgaaaattagttttcatttgcacgtgaatgaaaactaatt ttcata |
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Transcript ID | aug_v2a.21957.t2 |
Definition | - |
>aug_v2a.21957.t2 ctgaaagcgagttcgttatcacagatcacgtaacccatgtctcgccaagaacgagcggatgattcggtcgcacagatctg cgacgccattcgtagtatggcagttcaagaaaaaccgcggtcaaagttagtagttagttttccagtatttcggggcgatg agagtgaggacgtgtttgatttcttggataatttcaaaagagcagccaccctaaatggttggtcaaacgaagatttggca gtaggtttgccttaagtttgtatcttaaaggccatgctagcgcttggtttaaatcactgggaaacgtagatggcaaaact tttgaccaattgaaagccctgatgacagagcattttgcaagcggagcaagcgcttggcgcattagacaaaccttaggtca acgccgtcaattggaaaaggaacccgtttccgaatattcctatagtgttcgtatgcattgtgctaggttaaatttgccaa catcaagcattcgacccaaaacaaatgtcatctcaaactgtggctgagctgagtagggtaatttccccaggaaatgagac tattggcgcaattggtagtcagcacacaaattttcatgacgcacattttaaaagaatggcgagtgatgaatttcgcgacg ttgcacaaaatagtggaccctcagggagtgaatttcgacgacgtaggaattttgggggccagacaagttttcgtccacgt gcaaccaatcgagtttgttgccggaaagggcatttacattattattgcaatgagaaacctgacccaagagttccacgaca aaacaattcccgtcgaggcagtaatttttatgggcaacaaaatcgattcagtggcaacaattttggtaataatcagggaa actagatgtcgcccctgttgcgttggccaatagacctgtgatgggggcgaatttaaatgagaaattttgtagtcagattt catcagcggatgcaagtttagtcgataaaaaagccttcgtcccgacttgttctgctgaccgaactgaagctagttgtagt tttgaacctggtgagaagcaatcaccaccgtctgatgatttatcaaaacagattgcctgcctttcgaggaacgttttagc tgtgttcatcctattgctaagtattattatcagtttgttgaaattggttcaatttattttggcagaatttgtccgaacag ttgaaaaaccgcgaccgccaaaacaaccctcacgctgtgacgttgaagagtcattacaagtgtccgactcttgcggaaac gataaagtggcacgtgtgaacgttcagtcagttgaagtagatcctcaagattttcaagttgttcgagagaaacaaattaa agtagagacagcaacagctcatcatgtgttttccggtgaagacgcaacagtctcgaattcgagtcctttagattctgatg aggaattaattgttctgtcacccgagattgtcaattcgactgaagtcaccactcaaagtgagagagtgaaagttgaccca cagtctagtgattgtgcttatcggaaaggaaacattgatacatctattaggtcaatggacagcgtgagttttcagttgaa gtctagtgattttactgtttcagtaggtattgcgaatttcaaatttcaagctttgttagacacaggcgctgccgttactg cagtgagtgcgcgcatttggagggaatatttagttgacattcaccctaatctgaatccgcccgctcgcggtgctgtcaca acagtagatggccgcgaactagtcacgttgggaacgctagttttgacttttgaagttggtgctgattcttttcttgtgaa ggctcatgtgataaaaggactggcttttgatgtgattattggaagggattttctcaaagagttttgctctggaatcgatt tcatgaataacgaagttgaatttgtacacgctgacgatccgcttccctttgattttagtgaccttgatgatgaccccgat gtagatgattccgaatttgctagttccgtgcatgctgattgttctttcacgatatcaccgcgatctgaaaagattgttct tggcaaattgaaaactacgccactgaatggacagaagggagacgtttgtggcatagttataccaagatctaacctgcttc accgttattcaattttcggtgcagcagagattgttaaggtttcagagaatggtacgattccgatcagattagtcaatccg tctgcccaaccagttaaggtattccgcgagactaggctaggcgatttttcaagcgtcggagatgaagttgaaacatttga gttgaatgaatttccccaggaagtcttgtctgcgacgtctgagggtcaaatgaaaaacgaattgcctcatcacgattatt cagatttatctgatttgtcagacagcattttgaacgatgatgatagaattaagtttcgtgaattatttcggtgctaccgt gataattttccttttactggtgaccaacttggtaaaacttctctcgtccaacacgtgatcgacacaggagatgctatgcc tattaagcaaaggccatatcgaaccagtcctcgttgtaaacaagaaattgatcgtcaggtagatgacatgctccaaaaag gaataattagggaatccgtttctccttggagttcaccggtagttctcgtcaagaaaaagaatggtagttttcgtttttgt gtagatttgaggaaagtaaatgcagttacaaggaaagacagttttcctatgcctttagtgtccgatactcttgatgcttt gaatggaactaagtatttttctacccttgatttaaaatcgggttattggcaaattgaaatgcacccagagtctcgagaaa aaacagcgttcgtgacacacaacggtctttacgaatttaatgtcatgccgtttggtcttaccaattctggcgctagtttt cagcgtctcatgggccatatacttcgagggctagagtacagatttgctttgatttacatcgatgatatcgtgatcttttc caaatcaatcgaagagcacttgacccacttagaggaaatttttagaagattgcgtgacgcaaatgtgaaattgaacccgg agaagtgcagctttgtaaaacaacgaattgtgtatccaggtcatgttgtgactccagagggtattttccctgaccctagt aaagtagaagtcgtgaagaatttcccaacgccagcgagtcttaaagaattgaagagttttctgggtttagctaattatta ccggcgtttcattaaaggtttctcagaaattgcaagtccacttaatgcgttaacgaagaagggcgttaagtttttttggt ctgagttgtgtgccaatgcatttgatcggttgaagcgtgctttaatttcagctcctgttttggtgtttcccgatttcgag gagcagtttttactttatgttgatgctagttcaaccggtatagggttcgcccttgcacaagttcaggacggtaaggaagt ggtaatcgcttttaatggaagaggccttaaccaggcagaacgcaattatacaacaacagagagggaagcactcgctttag tcgagggtatcaaaaaattccagccgtatttgcattatcacaaattcgtggtgtacacagatcatagttctcttcgtggg cttatgaacgttaaagatgctactggtcgattggcgagatgggctttgttgcttcatcgtccaggttgccagaatggtaa cgctgatgctttatcaaggcgcccatatccaaccaccaacttgaaccccttacagcagagtgatccagagatcgaaaaga tctctgaaaaacagcgcaaagatccagagttgagtgaaataatagattatatccagcatgacagtttgcccagcaacgat gcaaaagccaggagaattctgctaaggagcgattgtttttacatcagtcaagacggtttgttgtatcatctcgatcgtag ccagaagcttagtgctcgcgatagtttttcccaactcgtggttcctcagtcaatgaagtacgaaattttgtcccatgtac annnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn tcttgatgttaaatttctgccaccagctgccgacgacctctcgacttcagttttagatcatcgcaagcgcattgtcgaaa aagtggaattagctcagaatctagctcgtgaaaatatacagcgttcacagcagaaaatgaaagaatactacgatcgtaat gcaagtcaaccgctttttgaaatcggacaacgtgtttgggtttacacgccaaaaacgaagaagggtctatcaaagaagtt gttgtataattggtttggtccatatagaattgttgagcagtcgtctcccgttcaataccgtttgcgttctaaaagtaaca agaaagttactttcgctgtccatgctaatcgaatgaagccttttgtcgatcctgctttgagaccaatcgaaccaccgagt aacaatgacccgagtgaaccgtatttagatgaatcagacattcctgcagattccttcgaatctagccagtcacatagcca taacagcgacacaagcgttacaataggccatttctgaattaccgttagcctcttcttcaaagcgagtcctggtgctcatc ctttcatatgaaaattagttttcatttgcacgtgaatgaaaactaattttcata |
Protein
Protein ID | aug_v2a.21957.t1 |
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Definition | - |
>aug_v2a.21957.t1 MPLVSDTLDALNGTKYFSTLDLKSGYWQIEMHPESREKTAFVTHNGLYEFNVMPFGLTNSGASFQRLMGHILRGLEYRFA LIYIDDIVIFSKSIEEHLTHLEEIFRRLRDANVKLNPEKCSFVKQRIVYPGHVVTPEGIFPDPSKVEVVKNFPTPASLKE LKSFLGLANYYRRFIKGFSEIASPLNALTKKGVKFFWSELCANAFDRLKRALISAPVLVFPDFEEQFLLYVDASSTGIGF ALAQVQDGKEVVIAFNGRGLNQAERNYTTTEREALALVEGIKKFQPYLHYHKFVVYTDHSSLRGLMNVKDATGRLARWAL LLHRPGCQNGNADALSRRPYPTTNLNPLQQSDPEIEKISEKQRKDPELSEIIDYIQHDSLPSNDAKARRILLRSDCFYIS QDAADDLSTSVLDHRKRIVEKVELAQNLARENIQRSQQKMKEYYDRNASQPLFEIGQRVWVYTPKTKKGLSKKLLYNWFG PYRIVEQSSPVQYRLRSKSNKKVTFAVHANRMKPFVDPALRPIEPPSNNDPSEPYLDESDIPADSFESSQSHSHNSDTSV TIGHF* |
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Protein ID | aug_v2a.21957.t2 |
Definition | - |
>aug_v2a.21957.t2 MSRQERADDSVAQICDAIRSMAVQEKPRSKLVVSFPVFRGDESEDVFDFLDNFKRAATLNGWSNEDLAVEFVRTVEKPRP PKQPSRCDVEESLQVSDSCGNDKVARVNVQSVEVDPQDFQVVREKQIKVETATAHHVFSGEDATVSNSSPLDSDEELIVL SPEIVNSTEVTTQSERVKVDPQSSDCAYRKGNIDTSIRSMDSVSFQLKSSDFTVSVGIANFKFQALLDTGAAVTAVSARI WREYLVDIHPNLNPPARGAVTTVDGRELVTLGTLVLTFEVGADSFLVKAHVIKGLAFDVIIGRDFLKEFCSGIDFMNNEV EFVHADDPLPFDFSDLDDDPDVDDSEFASSVHADCSFTISPRSEKIVLGKLKTTPLNGQKGDVCGIVIPRSNLLHRYSIF GAAEIVKVSENGTIPIRLVNPSAQPVKVFRETRLGDFSSVGDEVETFELNEFPQEVLSATSEGQMKNELPHHDYSDLSDL SDSILNDDDRIKFRELFRCYRDNFPFTGDQLGKTSLVQHVIDTGDAMPIKQRPYRTSPRCKQEIDRQVDDMLQKGIIRES VSPWSSPVVLVKKKNGSFRFCVDLRKVNAVTRKDSFPMPLVSDTLDALNGTKYFSTLDLKSGYWQIEMHPESREKTAFVT HNGLYEFNVMPFGLTNSGASFQRLMGHILRGLEYRFALIYIDDIVIFSKSIEEHLTHLEEIFRRLRDANVKLNPEKCSFV KQRIVYPGHVVTPEGIFPDPSKVEVVKNFPTPASLKELKSFLGLANYYRRFIKGFSEIASPLNALTKKGVKFFWSELCAN AFDRLKRALISAPVLVFPDFEEQFLLYVDASSTGIGFALAQVQDGKEVVIAFNGRGLNQAERNYTTTEREALALVEGIKK FQPYLHYHKFVVYTDHSSLRGLMNVKDATGRLARWALLLHRPGCQNGNADALSRRPYPTTNLNPLQQSDPEIEKISEKQR KDPELSEIIDYIQHDSLPSNDAKARRILLRSDCFYISQDAADDLSTSVLDHRKRIVEKVELAQNLARENIQRSQQKMKEY YDRNASQPLFEIGQRVWVYTPKTKKGLSKKLLYNWFGPYRIVEQSSPVQYRLRSKSNKKVTFAVHANRMKPFVDPALRPI EPPSNNDPSEPYLDESDIPADSFESSQSHSHNSDTSVTIGHF* |