Gene
| Gene Model ID | aug_v2a.22208 |
|---|---|
| Locus | scaf15044 : 7446 ... 21328 : + |
| To GenomeBrowser | scaf15044:7446..21328 |
| Genes list of scaffold | scaf15044 |
Manual annotation
| Study field | Cell Cycle |
|---|---|
| Gene name | Adi-CDKL5 |
| Description | Named thus because this protein shows similarity with Homo sapiens cyclin dependent kinase like 5 by the BLASTP search. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin-dependent kinase-like partial | GO:0004674 GO:0005524 GO:0006468 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.22208.t1 | gi|166796291|gb|AAI59156.1| | LOC100145195 protein [Xenopus (Silurana) tropicalis] | 0.0 |
| aug_v2a.22208.t1 | gi|260783039|ref|XP_002586586.1| | hypothetical protein BRAFLDRAFT_248886 [Branchiostoma floridae] | 0.0 |
| aug_v2a.22208.t1 | gi|742076698|ref|XP_010829311.1| | PREDICTED: cyclin-dependent kinase-like 5, partial [Bison bison bison] | 0.0 |
| aug_v2a.22208.t1 | gi|723572608|ref|XP_010306173.1| | PREDICTED: cyclin-dependent kinase-like 5, partial [Balearica regulorum gibbericeps] | 0.0 |
| aug_v2a.22208.t1 | gi|676441146|ref|XP_009049402.1| | hypothetical protein LOTGIDRAFT_213120 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | aug_v2a.22208.t1 |
|---|---|
| Definition | - |
>aug_v2a.22208.t1 tttctttcagaaactttgaagtttcagcaagtataacagttgtatttacactgacagccgtagaaatggatacttccgtg tctctgttattgcattttgtgaaacccatcacaagtacttcctgaaaaggaagccattcaaagaagacgcatgagttttc gtatttgtggcgggtgcttcgttcacgctatgccaacggcacgcagcaaaaatatgagttatttaacaaagcttaactgc gtcaattaaacgctgatgaataaatacgaagttcttggaattgtaggcgaaggtatgtggtcgtttaattattgtttgaa tgataatgaaataaaatgtatttagacgccactgcacttgtacaaaattttgacatggttgtcacgatcccttcaaaaga agagaaggtgtgaatatttgttaaaaacatgtttcttggtttgttgttaggggcctatggggttgtgttaagatgcagac acaaggtaaatttaataaagaactacttcattgacacgtaaagccgaaaatttacaaaacaaacaataaaattaccttca tgtcttgtttgtttttaagttaaccctggttgatgacagttgtaactttttttagcgcgcttgcgatatttcatcatcaa ataaaagtttcctctaggatgacaaaatacaataacaaaatttatttgcactgttttaaaatttgcagaagtcaatagca gggttttcttacatcctttttttcgaagaagtctcgtacagttgaatgagtacattttaaatttttgcacaacggttttt ttttgcatagacttcatccttgatgcgttagaaggacaaacattttccagcatggttctctttttccattttcaggaaac aaatgaaattgtggcgattaaaaaagttcaaagacagtgaaggtgggttgtcaacagccaatacgttagtaatttgctat ggaaaccaattacaattttttgttctgttctatagaaaatgaggatgttaagaggacaacgttaagagaattgaaagtgc ttcgtatgctaaagcaagaaaacatagtggaattaaggttagtttcggaaaagtattgtttttccttttatgtcataatg tagtgcatgccatggtcaggttagtcccagtaatttcatgcttctagaggcagcttttggtatcatggttatgtggttaa agaaatcattaagttttctcaggtaaaacggcgatgatttatatttccttccagagaagcatttcactaaagagtaaagc tatatttggtgtttgaatgttttaggattaagtggttcaacagaccgttgataatgtctctctgattaaacagcgctggt ctgtatatttctttacagagaggcatttcgccgcagaggaaagttatatttggtgtttgaatatgttgaaagagtaagta atgccaaatatagaacacattcataaataattattgatattgatttaatatagcgaaatatgttttgctaaatgtaacat caatgctggaattacatttgcccagtcagtggaaccaatgacattcctttcaaatcaatatttgataggccagccatttc gttaatactcattacttgtgtgcagttagaataacaggtttaataatgcacatttaattgaatgctctcactcctcgctt atgatatccaccttttaggataatttccaatatcagttatgccagaccatggnnnnnnnnnnnnnnnnnnnnnnngttcc tgaaatcctagattcaatgttttagaagagagtgtgtggtaaacgtagcggtacttttggaattttcgcaagctgaataa atcttttgatcttttgaattgcttgaaggtttgttgagaatttttatttgttcctagaatatgttagaaatgttggaaga gatgcccaatggtgttccatctcaaaaagtcaggtaaattaaaatcttgcaagcaaattaatgatgatgatgatggtact gatggtagtcataacaatggcaaatagatctgtacagttctcatttccaaatctccaacttgtgtattactactatgtgt acaagcttgaaaaaggaagtaaacagttttcaaatttccagaatggaatcaattttctaagaaaatagacacaggttgag cttggtatcctcaaggtatcttagttgcacttgaattcgagagaatgaataacttgcagatgtcagaaaaattctttgtc tgtcttgcttatcaagagtattatataccacatgaatcacttcccaaggaaactagcgctacatccaccctcccccatgc ccctcctggggcacttatgtatatgtctttttgattgtctttgtttttctttttgttttagaaactatgtgtttcagctg attaaagctattaaatggtgccaccaaaatgatgtcatccacagaggtactgccactattaatttaaatgattggttcaa taattatattgtttttatggttgtgaaaattttcgacctttaactgaaaatgctgttattttatttgattttgaacagat atcaaaccagaaaatttgctgataagtaaggatggtgtcctgaaactttgtgactttggtaagttattctgatgacattg aactaacaataattgttaaattattaaaggcacttaccatcattttgccagaacttggcagcttgatcactcagcctgca aatggaatgtgtcatttctgtcaaactgagagcattgcttatggccaaacaactctggtcacaatccttccaaagcaggt ttagtttagccagaaagagttctctgtttgacagaattaaacattccatctgagactggctggtcctggctggttctggc aaaaatggactcaccaggtatacatggacttcaagtctacagtgcatggtaggtggtcacacatttagcctgtctagctt agagaacaatttggtagacagtgatgaccttctctgaagaaacccttgcctccatgtatgtgtgtaggcttcattgtgaa tgactgtaacagatgtccgggaaaaccatgaacaaggctcaaaactttttcatgagaaccaacaactgcagtaaattcac acattatacaaaaaaataatgataattattatttctttgtagactatgtgaatttgccgttgtccactgagatgtcatgt tgtgcatttatgtgtggtgtgacttgtttcaggttttgctcgagccatgactgtcaatagcagtggtcaattcacagatt atgttgctactcggtggtacagatcccctgaacttcttctagggtaagctgttgtatcatccatcatcaacaacagatat ttatgaacaagaactttgaacaagaaggtttaaaaaaagcaagaacaacaatttcagggcagaaaattgagaccaatgca gtcacaaagaaactaatcttctagaaaaaaaaatgatgttaatcataaaattgtgatagcttcactttgtaaatgaaaca cctagcattttttccctgacacgtttgataaaattattagctactaaatatttttgttctgcttctgaaattttgtctct agttgctaaagtgtgacctccaaatttcttaatttcaagccctgaccaagaatattgcctttctttgaaattctgaaaaa ttaagccttggggcttatatttttcaaaagcctttttttagaggatttttgtggagtgtcttatataaggaggaaaattt gtgttacaaaatcaattgggctggcttggaaggaaatttatggttacatcactgtttttgcattgttatatgttgtattt gaggacaattcccaagtataatctcccagggcgcttgtagtgggagtggcaatttaatggagggttttttgctgtacgag tttggggggcttaaacatggaggggtttattttccagaactttacaaattatttctgtggaagctgcagagcagtgtggg tgaggtaacgaatcatgaaaatgtggaatcagaccagttgacaagtgtcaaattcctgtcacaagaagagtaaaatgctg gtgttttgaacactagcaccagtatgacggaggaatgctttaaatgtcagctttgtaatgtcttacattttaaatcagag catgatttattttgacctgatttgaatgtgattgcagagcaccttatggtaaaccagtggacatgtgggcaatagggtgt atacttggagaacttagtgatggtcaggtaaagtgtacacagcttatattctattctatattcttatgtattattatatt ataccctgtgagtaaatagagtgactaatagtttattaacaaaattcctaggaaaacaaacttaatttacaatatatgtt ccactacttttcataaaaacttaaatcttgtcttgtctaaatagagtgacaattgcaaggcttctgttttttttgttttt tttgtttttttttgggaggggggtgggggcctgtttaagcaaaagtaggcatgacagaatgaggcaaaccaagttgaaaa caatgaaagttagctttgaatgtaccccccccccccacaatctcctgccctgaactttgaaaggattttttttcagaagc atcacttaaagaaagcagcacaaaaatttgaagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnntcaaagaagacggacatctctctaaaatcaaggcacttttctcataaagggtcctctcttctaggcgtc aagcaaacagaaagcttgcaaaatttgaaacctcaattgcctctcgacgttaaaaataacggtctcggaatcgcctcctt gggcaaagattttagtgacgaaaggaaacttgttatgcagcaaatggctacaaacgacgaattcaataatggcagcggtg actctgccacaatcgctagtaaaagcggccatgacacaaatttagaaatgtcggaaagttcatccaacgcagaaattgga aaagacatgggaaatccgcctttgagcaaacctgctgtttatagcacagcggaaattaaagctcgtacttcgtctcttca gcttgcgaatgttcctttatccagggcaggttctcaaagcgaggagagaattaattctgctgtcaacgataagagctgtg tcgccgaggaagatagcaaaacgagggcaaaacctactgtttcttcatacggcgttagccatcatgcacccgctaattac agcttcttccccggacacgaagaagcggagtttgagccaccgaggaatgtgaaggtaaacattaattttaaagggcaaag ctaaaaaaaaaccaaaaacttagagagttatcgattgttctagttctctagagtcctttccattttctcttatttttgca aggaaaccctcctgtaattctaatgtttcgcttaagtctggtgtaaattatttcagccttaagcttcaggtggaaaaact tccgcatttgtgattggccaagagcattagtatttcagccaaaattgaaatagggcagtttttcaaagtaactacgcgat ttcgattgctacgcttagtgattggctgaggaatctcacaccagtttttcaaccaatgagtatggccccaaacaaaaaac aaacaggtccgtacccatctcgaaaaacttgatacacatacactgacaaaactttgagaatacacgaacaaaaatatgag gtccgaacccctttcttgaagggtccgtacacagtttttctgttctgtaaacgagctttaagactttcttttttcttttt tttattgtttgattaaatcacataacgaccgaaaataatccagatcggatcgagacatgtacaagtacttgtacttagtg gatgtgtttcaaaagaaaagagcagttttcaaatgactgtcgaaagtaattacgtgattgcgattgctacgcttagtgat tggcttaaaagactcgcgccagcttttcaaacaatgagaagcaaaaccaaaaccaatcgcgccatgtacgcgtgannnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnt aaagcacgcgtcacctgatatataggaatttcagaatgtatgaccgagacgtgttgggttttacgcactgagcatgcgca tgaagaacaatttcctccttcagaccttctgtgcgtgctcgttgtgggaaaactcggcctcgtccactttttcaaagtgc gacctcaagaaccctaaggactcctggaatttgacctcttttggctcttaattctccgtcgtgcatccacagtaatttcg tgttcgtctttggtttcgacggaaacaaaaacactattacttatgactgcctcgagcgcgttttcccgcctttttagtat aggacacgtgcattctctctgcgttacgattggctcattttattgtttgccttagatgaaagtcgctctgtcgtaaatca atgactttgatatagtttaaaacgcgttttatcagcaggcaatggaccagcaaatcaaacaaaaatcagttcaggatcga caaggaaagacggtccttccaggtgaatattctgtgggcactatttgcttgttttattgatagaatataactgacccgtt actttgtaaacgagatggcatgacacaaaccaacaccaataccttgcttgtttctaactggtagggtaattgctcaccat ttcgagagccaatgagaaaaccaactgaaaccaagaccaaatcaatcgcgtgatttctttcgactgtcatttgaaaaccg ctttttatcagtaggttgccgagtgatctttaatatttgcgggctctcgcctcttgtcagctggcttctgagttgcgcgc atgcgcgtgtgttttaacccgctgttttatctgtttcttgagtgaaattttatgttcagatttttgtacgtattttctgt caccagaaaccgtgtcgatgtccaaccgcgaagaagctcatccgccgtccaattattcttttcaaatgaatttgaacaca gaaaggagaagctctaaatcagaattgtccacagcatctttcgaatttggaccatcgcaacacaccaaacctcgacagga atcacaatggtaagtgcactaaaactgcttgttcttttctcattgttcaatgtttcagcaacattggccgtttcagggct gaaaataactaacgtccaggggcgggtctcgtctggtcaaacatgtttttgcgcggacacgaccagtttttggctcannn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnacaggtgtttggcaatggcgtttcatattaattagctcgtcacttgtgttgaaaataacttcaaagtttcgtcg aacatttatcatccatgaacatttatcatccatgtgcaacgtgtgaacaactgagttcgcagaagatgtctcacgctccc agttcatttttgtggcctggccgaaaggagacgatggcacatgggtgtcctgtcgtaaatcacctggtagtcctgtgcga actgcgcgcattggttcgttctctgatacttatcacctcgtgactagaaatcgtacgcatgtattttccacgaaataatg tttgtcggcgtctaaaaatctttcttttgatattcaggtgtcaagtcttcctcttcaggcgaagcttcatcatttagact cgcaagggtaagaaagaaagacgggttttttttattttttttgcaattcggcagacgaggtaattaagattagtaatgaa atgttctctctttgcttgctttcttttcagtgaattaagcaaaatgggagaatggaacagaagtcctgaaatacaggtaa aagtaaagttcctttggaaaaagcgctactgcaacggatttttgttttaggagtttccctcctcaaatgttgcattgtcg tattttttttcctgttcttttagtcttttgatatgcgaccgcataagaacggaggaaaattatcatccagtgaaaaggta cggcaacagctttgtgttgaatgtcataaaagcaaaatggaatgtgtactgaacagagggaagggttcttccacaactga tcggaggggagggcggttgcatcgcagcgccgcataacgattggctgaaaaatgttgcgcaattttctgacccattcacg agcaaatataaagccaatcgcattatgctggcgcccaatttcccccgcttaaggtggccgaacacagttttcaagtgcct atgcctaattcaccattacttctgaaccatttatgatttggcgcccgttttttgcaagagtcaaggttaaccacagaaga gtttactctggcatttttgttaaggtgtgtgccgttgcgtgtgctgttgcgatggcaatggggttggttaaaatcaaggc tcaaaaaatggtttttgtttatttaaaaaaaatccagtcgttagattgttttttattggtttgcccttaacgaattgaca tgaattaaatcccttctatcaacactgttctaataaaattttgacataggccgttttcgtaattcgccgtaaatcggttt ttgtagtattaaaaataccctatgtcaaaattcagatttttcgtgatagatcattcacgtgatttcttaactattttgtg gccaaatttcttgaaattctaacgactggaattttttttttttgaaataaacaaaaaccattttttaagcgctgtgttgc catggcaacagcacacaccttgaccaaaatgcaagaataaactcttctatggttaaccttgaatcttgcaaaaaacgggc accaaatcataaacagtttaaaagtaatggtgaattaggcatagacacttggaaactgtgttcggccaccttaaatgggc gagacacgacttgggcatgcgcagtgggaacaggctaactactaaagatcgagaaaatttgcttttatcaaacgagttaa taaaggttgaactactaccccgaaatatttggaaatctttccaagtctttcacggtgggagtccatgcttcactctccca acgactcagcaccacagtttctttagaaactagaactggtcgctttttatcaggttgtccgcttttaaagctctaccgtc gactagtggtggaaggtgggaaggacgtgggtcgaactcgggtcgtaacgagtgggttagcaatcgagaatatggggtca agtacagccgaacggaagtcgtgttctccgatgttctccgatgtctccgacgttatcgtcgtcctatcgtgacagaaaca aatatgatggaatatggttcatgctgcaaacaaaagaggagtactcgtcgataaatcgcaacgcaatagcagagagagca tcccttgaagaagtggatcggccgtctccatattccgccatatttatttccgtcgtgatttgacgacgatgacgtcagag acatcggaaaacgcgattttcgttcggttcttcttcgcttgatcttatctaattccaaccatacgagtgcatagcacacc gcacaaaattttaaagggagttaatttttgcgatattgtgtttcctaattgggctgcaattcatttttatccttgtatag agcttgtctcatcttgtaccactgaccatcagctcaacacacaaacctctgggtgaagttcgtctccagcctcttcaaca caagaacctttcccacttatcgcacaacacctacccaacacgcaagccgccggccaaacgtgaaagccctgaatctcaaa tcctggggtctctgtcgccgtgggcggggcaatcaccctttcctcttcaaggccacggccacaaacagacgctatcggag acgattaatttcccatttcccgaccgacccatcagcccttcggctgaactcttggcgcccttgccaaggaaagcctcacg accgccttcagtgagtgaagcgactaatgaggagacaagtatgaagttaggcacaccttttactggactaaaaccactga ccccgccaaaacagcatcctggtaaaccaacagggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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aaatatgtaaggtatagctggagatggggaaacgcacgtgatatttatacaaaaccaaagatctcatttcaaaaggagaa ttaaacaaattactagttagaaaatgcttctcctacctttacttcgggattatgagacatagcttagtttgtgaatactg ctttcttgtttattggcgaatttctttgcgggatgtaggtgatacttcaacctcgtttcctagggacgtatcaatgaact gaaattgttactgtatgtcgaagaaactggcacgaggtaattccgttaattcccgttttatatttacttgaccctaagcg gacagtttttcatacgaatatggtaagaacttctaggctaggaaagctgcgcatgcgcaagcaaaatatcaagacaatag tacctctggacgtggtgccagagcgtcgtaccaaacgatttcc |
|
Protein
| Protein ID | aug_v2a.22208.t1 |
|---|---|
| Definition | - |
>aug_v2a.22208.t1 MKLWRLKKFKDSEENEDVKRTTLRELKVLRMLKQENIVELREAFRRRGKLYLVFEYVERNMLEMLEEMPNGVPSQKVRNY VFQLIKAIKWCHQNDVIHRDIKPENLLISKDGVLKLCDFGFARAMTVNSSGQFTDYVATRWYRSPELLLGAPYGKPVDMW AIGCILGELSDGQKTDISLKSRHFSHKGSSLLGVKQTESLQNLKPQLPLDVKNNGLGIASLGKDFSDERKLVMQQMATND EFNNGSGDSATIASKSGHDTNLEMSESSSNAEIGKDMGNPPLSKPAVYSTAEIKARTSSLQLANVPLSRAGSQSEERINS AVNDKSCVAEEDSKTRAKPTVSSYGVSHHAPANYSFFPGHEEAEFEPPRNVKQAMDQQIKQKSVQDRQGKTVLPETVSMS NREEAHPPSNYSFQMNLNTERRSSKSELSTASFEFGPSQHTKPRQESQCLPLQAKLHHLDSQGELSKMGEWNRSPEIQSF DMRPHKNGGKLSSSEKSLSHLVPLTISSTHKPLGEVRLQPLQHKNLSHLSHNTYPTRKPPAKRESPESQILGSLSPWAGQ SPFPLQGHGHKQTLSETINFPFPDRPISPSAELLAPLPRKASRPPSVSEATNEETSMKLGTPFTGLKPLTPPKQHPVI* |
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