Gene
Gene Model ID | aug_v2a.22412 |
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Locus | scaf15357 : 1 ... 6335 : - |
To GenomeBrowser | scaf15357:1..6335 |
Genes list of scaffold | scaf15357 |
Manual annotation
Study field | Transcription Factor |
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Gene name | Adi-COE |
Description | Named thus based on BLASTP results against NCBI nr and molecular phylogenetic analyses (NJ and ML). COE domain seems to be missing from this gene model and therefore adi_EST_assem_9817 was used for analysis. |
mRNA evidence | adi_EST_assem_9817 |
Annotation by Blast2GO
Annotation | GO |
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transcription factor partial | GO:0003677 GO:0005634 GO:0006355 GO:0007275 GO:0046872 GO:0046983 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.22412.t1 | gi|395508912|ref|XP_003758752.1| | PREDICTED: transcription factor COE2 [Sarcophilus harrisii] | 0.0 |
aug_v2a.22412.t1 | gi|507627503|ref|XP_004698238.1| | PREDICTED: transcription factor COE4 [Echinops telfairi] | 0.0 |
aug_v2a.22412.t1 | gi|675656200|ref|XP_008994013.1| | PREDICTED: LOW QUALITY PROTEIN: transcription factor COE4 [Callithrix jacchus] | 0.0 |
aug_v2a.22412.t1 | gi|699624593|ref|XP_009908307.1| | PREDICTED: transcription factor COE3-like [Picoides pubescens] | 0.0 |
aug_v2a.22412.t1 | gi|705678871|ref|XP_010117893.1| | PREDICTED: transcription factor COE2-like, partial [Chlamydotis macqueenii] | 0.0 |
Transcript
Transcript ID | aug_v2a.22412.t1 |
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Definition | - |
>aug_v2a.22412.t1 acacaaactcttcagaaaaacaaagaaatctgtgacttgtgaccaggagccggtacgaaggcagagagcgcctaaccatc agagagcaggtccaacggaaactccatctaaccagcaaaataacactcataacgcttttgaaggaatacgcttgacaact tcgacacaacgacgcaggaaatttttttgttaagtttgacactcgtttaaaatagagtcatgcaggaacatagtgcatct tcaccgctgaaagaggaagctgttggctggattccacccatggaaagcaatcaagttaccaggtaagcatttttttgtga gcggtttgtaatgatttcctcttgcatagcatagcttcgctagcttttcagccacgtgatgataaaaatgttctcgaatg cagcgttcacaaaaagttgtccagcaaattttttccagtttatggtaaatttgacaaattgttttcccgaaattttttca ttccagtggttgcagtttggccagagcgcacttcgagaagcaaccgccaccaaatcttcgtaagagcaacttttttcact tcgtcttggcgttttacgatcactcaggacaggctgtggagatcgaacgtgcaggattccttggttttgtagagcacctg ccggtaaatttcgtaattactgtgactttccttgttttgagacatccttgatttctgtcaaaaaatctaattgaggcttt tttcgccccttttcatgccccaggatcagaagaacgtgcgtaatggcgcttcgtacagacttcaacttctttacagcagc ggtgagttgctcatttgctggcccatgtgttgttcgtttgacggtttggtgaagagtgttcgagtgttgagttcatcaag ttaagaaggaccccggtgggaatataaaattcacttgcagaaaatgacagtcgacaggggaaaagggaattgcgaagtct tcagagacttattttcatttccggtgtctgccttcaaattgcgcctgtaaaggaatgcgagaatcgttatcattttacgt ctttactcgagctgctaagctacttgcgtcttcaaagaaaatcaacaagttgttttcggcatgaaaagaagtggttttca gatcactataaaatattggaggacaaattagtttctgaaatagactttcagtagtggttttagacgcgtcgtgttgccga aatgattaaagtgcgcggctaaaagaacttcttaaattgtatctcgctaacttaacataatttgctacccatttgttagg aatacgaagcgaacaggacatctttattcgcctcgtcaactctgttacgaagcaggtaacattttttctgaactttttat tatcgtaaaaatgcaataaacatttttttttccagtaaataatctgataaaagaattattcctgataacttcatgaatgt aaaccgatgttcaaagttcagttgcttgttggcaattccataactgtttaggactactaagcaagactttctaaacgtaa aatttagtttttacgccggactgagtttatcttcttgcacaagtccagaatgtagtagtgaaaacgtaacctcattttca ttgattcttcatttaaaaaaatgccgacccaaaaagatcaaagcgttttaattgttgtatggtaacactgcaaatttttt ttcactccagcccattgtatacgaaggccaggacaaaaatccagaaatgtgtcgtgtactcatgacccatgaggtgatgt gcaggtatttaaataaaagaatgtttgttctaatgcaaaatgaaataaaatgtttaaagctttgatattgttctggaatt ttcctgttggtggtgttaaaggtttggagtatggtgttgaatactaatgtagagccttttgtcttcctttttgaagtcga tgctgtgagaagaagtcatgtggaaacaaaaacgagactccatcagacccagttataattgataggtaaaaaatagtaac aatttgagcagaaacatttcagaatttgttccctagtggtatgaggagccataatttttgccctctgggaaatgcttttg ccttgggctgtggttgtcttcatggttgaaagaatttatgaataattctgtgctctcaaaagaagtctttaaaaggatta ctacaaaaagcattttagtgtggtttattgttctgtgatattgtttatgtgcacaatatcagtttaattgaataactgct ttcaactgcttgtacagttgaaataaaaataattttgtcatcctagtaaaaattgaggatggcattgtcttaagcagaac tttctagagagtatatgtgtggctttattctcaagacatttcagccaagaatattttaggttttgtttcaaaaggagatt atgtgaagtaaatctttgtgtttttgccatgcccattctcagatagaaacaattggctgcatttcatttagttaaagaaa tgacatttgttattttgttttacagtttccatgggaataaatatcatttatggtctaagagcttaagcaaattctcatca accattaagtccggtaaaacagtggttgaatgaagggatcagatctttgaatgagatttcacgaagaagtgtcaggcatc actattaactacataagaagaataaattttgaaaagttattgttgtggtctcatgaacaagatttgatgagccacaccta gtgcaaccaaggctttaaaatgttttgttttgttccattagagatgatgatttttttcatcaatttagacttcttattaa gcctaataattctctttaaaaactgagaggtttttcagtccaatttctgacactccatgtagataccattgagaacaaaa aatattgtatcaaagtagcaggtacaattggtatgaaaatactctatttccaggtactttttgaaattttttttaaaatg caatcaaaactgcctcaagaatgcaggaaatccaagggacatgagacgattccaggtaatactgtgagatctttcttttt gaataggaagcttttaatgtcaaggttatggtgatcattctggttttatgttttttnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgc aaataagacacacttggcatttatttcagttgtggtagcaaataccacctttcagtggctgtcactaattctcattcaga agtttgtgcaggttgtttcctttcctattttattgtatctgccttaacttatcactttttgaaataacgttaaagctcat tttgtcggtgttaaagtaatgtttgtaaaggttggataataactgttaaggagaagacatcaaaaaagtaggtacataac tgcaaagtcatgatcatgcaaaaaaaattaaccaatgtaaggaccagttacttaaatgagttgatgatttttgtagtgtt ttgtgtaaagtgtgttatcaacaatgtgaaattgactgctgaaattttgtctatagttcataactccccatgccatcaga gtacaagccccacccagaccattccctagcacagtggaagttacgttgatgtacagaaacaagcagttttgtaagacagc ccctggaagatttatctattctggttagtccttaacatgctttgaacatttgtggaaaacatattattcatattgtagtg tgtggctggacatgttgaaatggttcacttgaagaatgttattttaggggtacacacctaagagggtgaatatgaaggat tccttgataagttcaatcaatagcagtggtggcagcttagcaaccagtcagagccagtgtaactttgcaatttgttgtga tctacaacagcattgttgtgtggcacattttgccaccaactgttggtcaatcccctgtaacaggaattatgtcaactgca tcaataatattgtgcagaggaaattctttcattttagttgacagggaatgaatctgtttttggtccaatcaaaattttga caggaagttttcaatgtaatgttaatataatgttacaagaataatttaccgcaaataaaaaagtctttaatgatgccaat agtaatgatataggtagttggttacttctaatgaaattgaatatcactgtggtgtttgtggttatttaaagcactctgtg agcccacaatagactatggatttcaaaggttggcaaaactcattccacgtcatcctggagatcctgaaaagttaccaaag gttggtacatatttgtttgaatttcaaaatacactcagtcttgtactgcatttcatgttttcctgtccttctgttataaa gagtacttttattatttggtttgaatcagtcttgcataacaaggaaaaatcgaagagaaaatgaatctgtggattcaaca ctctgctttgtcaatcatttgcaaaggttctgttttttttgtttttaggaaatcattttaaagagagcagcagatctttt agaggctgtgtgcttcaatattcctcgcacccctactcagattcacacctcacaatacccacccgctggcaatcaaccac ccaattcttccaatggaaatcatccaatgatgattggacagcatttgacgaccattactcctgatgggttaaataatgga ggaccatatgtaaccatcacaaacccagatggcacatcggtggtttacggtggctccaaccaacagaggataccaagttc tacggatgtaaacaacaacgatgttgcaatatcatcctcaggttatgcatatgattttattgctagaagattcttctcag tttccctgaggctgtgaaataatctgatattccccaggtacaaaacacaagtcattgttttgcaaatataaaaagtatct taaacattcataaaagctaaccataggcctaaaaacttctgtttgggcctaattaggcctaaggttagcttttacaaatg tttaggatactttctgtattggtaaaacaatgacctgtgacctgtgttttgtacctgtcgtctgatattttaccgtaact gttgatatatctgacatgtttcattatctatagagttgaaataattcagctgcatgtcattgaataagaaatcaatccag tgcattatttctcactcttccaaaatttatttccaaatggaatcagtagtagtctgaaaaagcttactctgttttgcatg aatttgttttctctttgcaatatggacacaaacagttgaggttatcacaagtgacacacgcaaaaggaagggttccattc atgttaataaaataatggaaaggaagtttgcaagttgcaatcttcccactgtcttgtagaggactgtacctttgcagaca gggtctgtacttggagaataatgcaattgatgatgcaacagggataacaattgaagctatgggtcataatattctagttt caaaagtggtggtgcattttgttattcctttgtgttcatgttaattagacctaccagcctcacaaatattcttttgaatt ttgcccttggaagcgaggttagaacggctgattagcattaaaataaaggaatgttaaatttgatcgaaattatgaaagag gtctagaaggaaccagtaaaagtagaagtctggaaaagctacaagatgactccttgcatgttgtagatgtacatgtctgt gagtgtagtctgctccagttattcataactatatggtaatgtcaagagaagcaatagaaagaaatagaaaattacatggg gtcctttcatttgcaggggtgcttggagaaaagccttaagtgacttctgataaattactagattctccttccagatttcc ttgtattcaattgtgaatgactaggagaatttgaaattgcatcaaaagtcacttaatgccttattccacacaccccttca tttagacctcactgtaaaactggtcattatcaggtggttctaagttctgtgtggttaccttgttcgttgcaggcagaagt actcccacaccaagg |
Protein
Protein ID | aug_v2a.22412.t1 |
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Definition | - |
>aug_v2a.22412.t1 MQEHSASSPLKEEAVGWIPPMESNQVTSGCSLARAHFEKQPPPNLRKSNFFHFVLAFYDHSGQAVEIERAGFLGFVEHLP DQKNVRNGASYRLQLLYSSGIRSEQDIFIRLVNSVTKQPIVYEGQDKNPEMCRVLMTHEVMCSRCCEKKSCGNKNETPSD PVIIDRYFLKFFLKCNQNCLKNAGNPRDMRRFQFITPHAIRVQAPPRPFPSTVEVTLMYRNKQFCKTAPGRFIYSALCEP TIDYGFQRLAKLIPRHPGDPEKLPKEIILKRAADLLEAVCFNIPRTPTQIHTSQYPPAGNQPPNSSNGNHPMMIGQHLTT ITPDGLNNGGPYVTITNPDGTSVVYGGSNQQRIPSSTDVNNNDVAISSSGRSTPTPR |