Gene
Gene Model ID | aug_v2a.22622 |
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Locus | scaf15693 : 225 ... 4077 : - |
To GenomeBrowser | scaf15693:225..4077 |
Genes list of scaffold | scaf15693 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 89 |
Description | This gene model contains Retrotrans_gag, RVT_1 and rve domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.22622.t1 |
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Definition | - |
>aug_v2a.22622.t1 tttggcgacgaggatggccgagattacatccataccaccgttcgatcccttcgaacagaccggcagcgtgggtccccgct gggacagatggaaaacacgtctccaatattacatcgatgctcgtggaatcactgttgacaatcgcaaacgagcgttgcta cttcacctcgccgggccggccgtccaagacatctttgctaccttatctgacactggaactagttacatggatgcgcttac cgcgctgaacacttacttcactcctcagaagagtttacaattcgaacgacacacctttcgccaggctcatcaagcgccca atgaatcgatttctcaatacgtaacacgtctacgtcgactgggagagcactgtgacttcgataaatactcgctcgacgag gctattaaggaccagctaattgaacattgtcactccaacacacttcgccgacgcctccttcgtgaaaaatcgactgtttc tctcagttccttgatagatattgctcgctccatggagtcggccaattttcaggcggcaaacattgaaaatgcctcttccc aagaaaactcggaattcgctcatcaactcacaacaccaatcctcagtgaagaagaacaagtgaattttacttcagacaat cggcaacaatgtacacattgcggtaaccagcccgaccaccagcctcgaacccccaaatgccctgcttttcgtaaaacatg ctcccagtgcggaacccttcaccattttggacgtgtttgtatgaaaagaaccacaaatccaggttacccaaaaggcaaac aggcagggacacccaaggcccggtatgtttgttactcttcagatgaggacgaaagtcatcaagcatttcacctcaaccct accaaagagaagtcagatatcacggttaccattgaaggcacccctgtcaaagtttgcattgattctggtgccacagcgaa caccatcgactacgcaacatatgaggccatcagtgctggaaaaacagtacctataaaacccacaaatgtgaaactttgcc catatggagaagataaccctgcgcccattccccttgtcggatcgtttttcggactgatcaacactccatctgggcagacg gatctgacaaagttcctggtgctcaaagcacggaatgctggttgtctgttaagtcgtgaaacctcaacccggctgggaat gttgcatattgctgcttctaccgctaccgaacacccacctctgcatggtgaataccagtaccttttacagaagttcccag cagtgtttagcggcaagatcgggaaactcaaagattaccaactcgagctgaacattgatccaactgtacaaccagttgta caaaattcccgtcccacacccttacactaccgccccaaggtggaagccaagctgaaacaacttgaggaacaagatatcat tgaacatgtgacaggtccaacaccatgggtgtcaccactcgtcattgtcgataagccgaatggtgatgtaagactgtgtg ttaacatgtgcaagcccaacgaggctctctgtcgtacacaccacccctacccaacatcggaagaaatcctacaagaccta aacggctcccagttcttctccaaaattgatctcaaagaatgttatcatcaaattgaactgactgaatcatctcgccacct gacaacatttaaaacacatgctggcctccgccgttacaaacgcctgccatatggagcttcagtaggctccgaagtatgcc aacatgtaattggacaggtcctcgagggatgccataatgcgaggaacattgctgacgacattcttgtccatggtaccact agagaggagcatgacagatccttagaaaatgtattgcttcgtctccaagacaaaaacctcactgttaacccagcaaagtg tctatttggagtcaccgaactggactattatggattccacatctcagcacaaggtatctcccccgacaagaatcgtatac atgcaatcaagcaaatgcaaccgcccagcacagccacagaagcaagaagttttcttggattagtaaataccgtggcccgt ttcgtcccaaacctcgctgctatgacagagcctatacgaagaatcacacacaagaaccatccatggttgtggggtccgga gcaatctgaagcctttaacaaactgcgtgacctcatatcgagcaacactgttctggcccattttgacccctccctcccca cccaagtacgtcatgacgcctgcaagattggaatcagtggtgccttaactcagaagcaccctgatggttctatacgacct gttgcatatgcaagccgtagtctctcacccgttgaacagcgctatagccaaactgaaagagaagccttatccggagtgtg ggcatgtgagaggtttcatttttacatccatggcagtcagtttgacctagtgggagatcacaaacctctggaagtcctcc tcaacgggcgtgggaacccttccccaagaattgaacgttggcggctacggcttcaaaactacagcccacgtattgtttat caacctggcatacaaaatgctgttgactttttgtcacgcaaacctgtcccaaccaacacacccagagatcctgttgagga atacgttaactccattatagttgactcgcttccttcagccgtcactcttcaagagcttcttcttgcttccgaatgtgacc ctactttgaacaccatcaaggaggccctggacactgggaactggtcagccgcaccaaagccctttgcagatctaaaggat gaactttgccagaaacgtgggattattctgcgaaacaatcgtattgttatccctgatgcactgcgtcctcgcattattca gttggcacacgagggccatcaaggcatcactaaggttaaacaacatctcagacaaagagtctggtggcctggcatagata ttcaagctgagagatatgtacgtgactgccttggttgccaaattgtgggccccacacctcccccagagcccctccgaatg acagatccaccaaaacaagtatggcacaccgttcatgttgattactgtggcccatttccatccggagagtatctttttgt tgctgttgatgaaacatcaaagtatccagaggtccacgtcacccgctcaagtacagcagccacagccattacacacctta cccaaatgttcgcaactcatggtattcctgaagtcattacctctgacaatgtccctttcgggtcagaggagtttgccgca tggtgtaagcaattaggcattaggcatcgtaaaattacgcccctgtggcccgctgcaaatgcccaagtggaaaggttcaa taaaaccctggagaagaccattcgcattgcgttggtagaagggaagaactggcgttctgaactgtttgtgttcttaatga attaccgaaacactccccattcctccactggggtatcgcccgcatctctgttgatgaatcgccatatccgaactaagatt ccttgtttggatctctctcgcccctctaagctcatcaaaatcgcacgttccaatgacaatttgcgaaagtccaaggctaa gtcatacatggacaaacgacacagggcaaccccttcagacattcgccagggagatcaagtgctgctgcttcagaagcgtc aaaacaagttaaccacaagatatgaccctagaccctttactgttgtcagaaaaaagggagtcagcgtggaacttgcaaga ggaggggcacggttgtttagaaatgtatccatggtcaagaaagtgattcccacaacaaggaacatcgaacctgtcagaag acctacccaagaa |
Protein
Protein ID | aug_v2a.22622.t1 |
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Definition | - |
>aug_v2a.22622.t1 LATRMAEITSIPPFDPFEQTGSVGPRWDRWKTRLQYYIDARGITVDNRKRALLLHLAGPAVQDIFATLSDTGTSYMDALT ALNTYFTPQKSLQFERHTFRQAHQAPNESISQYVTRLRRLGEHCDFDKYSLDEAIKDQLIEHCHSNTLRRRLLREKSTVS LSSLIDIARSMESANFQAANIENASSQENSEFAHQLTTPILSEEEQVNFTSDNRQQCTHCGNQPDHQPRTPKCPAFRKTC SQCGTLHHFGRVCMKRTTNPGYPKGKQAGTPKARYVCYSSDEDESHQAFHLNPTKEKSDITVTIEGTPVKVCIDSGATAN TIDYATYEAISAGKTVPIKPTNVKLCPYGEDNPAPIPLVGSFFGLINTPSGQTDLTKFLVLKARNAGCLLSRETSTRLGM LHIAASTATEHPPLHGEYQYLLQKFPAVFSGKIGKLKDYQLELNIDPTVQPVVQNSRPTPLHYRPKVEAKLKQLEEQDII EHVTGPTPWVSPLVIVDKPNGDVRLCVNMCKPNEALCRTHHPYPTSEEILQDLNGSQFFSKIDLKECYHQIELTESSRHL TTFKTHAGLRRYKRLPYGASVGSEVCQHVIGQVLEGCHNARNIADDILVHGTTREEHDRSLENVLLRLQDKNLTVNPAKC LFGVTELDYYGFHISAQGISPDKNRIHAIKQMQPPSTATEARSFLGLVNTVARFVPNLAAMTEPIRRITHKNHPWLWGPE QSEAFNKLRDLISSNTVLAHFDPSLPTQVRHDACKIGISGALTQKHPDGSIRPVAYASRSLSPVEQRYSQTEREALSGVW ACERFHFYIHGSQFDLVGDHKPLEVLLNGRGNPSPRIERWRLRLQNYSPRIVYQPGIQNAVDFLSRKPVPTNTPRDPVEE YVNSIIVDSLPSAVTLQELLLASECDPTLNTIKEALDTGNWSAAPKPFADLKDELCQKRGIILRNNRIVIPDALRPRIIQ LAHEGHQGITKVKQHLRQRVWWPGIDIQAERYVRDCLGCQIVGPTPPPEPLRMTDPPKQVWHTVHVDYCGPFPSGEYLFV AVDETSKYPEVHVTRSSTAATAITHLTQMFATHGIPEVITSDNVPFGSEEFAAWCKQLGIRHRKITPLWPAANAQVERFN KTLEKTIRIALVEGKNWRSELFVFLMNYRNTPHSSTGVSPASLLMNRHIRTKIPCLDLSRPSKLIKIARSNDNLRKSKAK SYMDKRHRATPSDIRQGDQVLLLQKRQNKLTTRYDPRPFTVVRKKGVSVELARGGARLFRNVSMVKKVIPTTRNIEPVRR PTQE |