Gene
Gene Model ID | aug_v2a.22733 |
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Locus | scaf15847 : 1 ... 1335 : - |
To GenomeBrowser | scaf15847:1..1335 |
Genes list of scaffold | scaf15847 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 58 |
Description | This gene model contains RVT_2 domain. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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retrovirus-related pol polyprotein from transposon tnt 1-94 | GO:0005488 GO:0009536 GO:0044238 GO:0071704 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.22733.t1 | gi|253761858|ref|XP_002489303.1| | hypothetical protein SORBIDRAFT_0010s005460 [Sorghum bicolor] | 0.0 |
aug_v2a.22733.t1 | gi|339259278|ref|XP_003368986.1| | retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trichinella spiralis] | 0.0 |
Transcript
Transcript ID | aug_v2a.22733.t1 |
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Definition | - |
>aug_v2a.22733.t1 tctaaatgggacagatgcaaatctgtggcatgatgctatgcagcacgaaatggactctctccataaacataatgttttta accttgttgaattaccaaacggaaggaaggccattggaagtaaatgggtttttcgtgtcaagcataatgctgatggttcg gtagagagatgtaaagccagacttgttgcacaaggctactcacagaaacacggtgtggactatgatgaaacatttagtcc tgttgtgcgttttgaatccttaagaactgttattggactgtctgttaaacaaggactgaaactgcatcaaatggatgtaa ctacagcttttctcaatggagacttagatgaagaggtttatatgagacaacccgaaggatttattgtggaaggacaggaa catttagtgtgcaaattgaacaagagtctttatggattgaagcaatcacctaggtgctggaactatgtacttgacgaaca cttgaagtctatgggttttgttcagactccgagtgatccctgtatttatgtttctgatgatgattctaatccttttgtta ttgcagtgtatgtggatgacattgttctcgcaggtccatctgacgagaaaatcgctgaagtcaagcaaagcatctctgaa aggtttgagctaaaggatatgggggagctaaagtattttcttggaatgcaagtgattcaggaagatggaaaggtttggat tggtcagtcctcttatactgaaaacattctcaagaaatttggcatggaaaattgcagacctgttgctacccctgcagatc ccaattcaaaactcactcaagctggctctgacaatgttccttatgaccaatttgagtatcagtcagtagtcggtagttta ttatacctgtcatcagtttcacgcccagacattacatttgcagttagcaatgtggctagatactcatcaaatccaaccaa agaacactgggtggctctaaagagaattctgcggtatctcaaaggaactgtgaactatggcatactcttttcttgcaatg tggaatctgagtgtgttggattctctgatgctgattgggcaggtgatgtaaacgatcgaaagtcaacatctggttactta tttcaactgtgtggtggagctattagctggaggagcaagaagcaaccttgtgttgcattgtcaactgctgaagcagaata tatggctttgtcatcggctgtacaagaagctctgtggctcaaacatctacttgtagacttgaaagtagttacccagacac ccatgagagtatatgaagataatcaagcagctatcaacatgacaaagaatcccaa |
Protein
Protein ID | aug_v2a.22733.t1 |
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Definition | - |
>aug_v2a.22733.t1 MQHEMDSLHKHNVFNLVELPNGRKAIGSKWVFRVKHNADGSVERCKARLVAQGYSQKHGVDYDETFSPVVRFESLRTVIG LSVKQGLKLHQMDVTTAFLNGDLDEEVYMRQPEGFIVEGQEHLVCKLNKSLYGLKQSPRCWNYVLDEHLKSMGFVQTPSD PCIYVSDDDSNPFVIAVYVDDIVLAGPSDEKIAEVKQSISERFELKDMGELKYFLGMQVIQEDGKVWIGQSSYTENILKK FGMENCRPVATPADPNSKLTQAGSDNVPYDQFEYQSVVGSLLYLSSVSRPDITFAVSNVARYSSNPTKEHWVALKRILRY LKGTVNYGILFSCNVESECVGFSDADWAGDVNDRKSTSGYLFQLCGGAISWRSKKQPCVALSTAEAEYMALSSAVQEALW LKHLLVDLKVVTQTPMRVYEDNQAAINMTKNP |