Gene
Gene Model ID | aug_v2a.22906 |
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Locus | scaf16134 : 1 ... 2142 : - |
To GenomeBrowser | scaf16134:1..2142 |
Genes list of scaffold | scaf16134 |
Manual annotation
Study field | Transcription Factor |
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Gene name | Adi-USF2b |
Description | This gene model showed similarity with Homo sapiens Basic helix-loop-helix domain-containing protein KIAA2018. Tentatively named thus based on molecular phylogenetic analyses (NJ). aug_EST_assem_12923 was used for the analyses. Adi-USF2a and Adi-USF2b seems to be haplotype and therefore are regarded as a single gene in the paper. |
mRNA evidence | aug_EST_assem_12923 |
Transcript
Transcript ID | aug_v2a.22906.t1 |
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Definition | - |
>aug_v2a.22906.t1 tggaacgcaggagaaaagacaaaataaacaaatggattttgaaactggcacaagctgtgccacagtgtaaatggggaaag caggtaagaaatacagtaaatttgggaaggctagaccgtttttctgtaacatctccattgtggttgtgtcctactaaaca tacaggcactgactagacctaactggtgttagtcattttctgcaaactaaagtagagtggatgctattagtagtagataa aatatcagcaggaaatctgtatgagtatttacaatggggggccgaaggcaagccattgttaacgcccataaaaactggac atgaatattttattgtacttctgaaatgaaacaataggagacatctgtatcaaaagttaatgaatactaattcgctgagt agggctctgtatcaaaagttaatacaactgattaataatttatcaaccctcgttgatttgttttggggtgcacatgtgac tcaaataatgcccattgattggtcataactcttatgaattattaatgaattttacaagctaggttacaaatgtagttatc atgacttttgtcctttgcttggtgactcataaacattatcctcattttgacttttattgttgtggtttccatgatcatca tctttgtggcatgaataaaagtttaatatgtgtgttcaaagaaaaaggatagtgttgtgcagagaagaggagaactgctg gtgtttatgaaaaacaagagcagcaaaggcagagggaagatgggtcggtgtagttgtctatggagggaaggggtagggga tgaccgacgtccctggggcagggcttgtagcttgaaggtagttatgaaagccttctggtttctttagtttttactatctt ttatgtgtcttcttttagagcaaaaatatcgtacttgaaaagactgtggaatacatcaatgaagtcaatgatcagctaaa ggaattgggcaattcacagcagagggagcaaaaactcggtgagagctgttgaaagtcaggtgattccgtatagtgtagtt gttaagttgatttcattgatcagtagtgtgtcatttacatctaataagagacagcaagttacctctaaatccgacgagtg ataaaagaatggactaagtacacgcgtgaaattcggaggccacgcgacccgagggatgaggaggggagggtgggtcgttg aaaatttatttcgccgctccctctcgtcgcttgtcctcggagtttcacgcgtgtacnnnnnnnnnnnnnnnnnnnnnnnn nnnnnatcactctccgaaattcgagactactcgcagtcgagtgtaaataaaccaaacaggtaaatatctgatttttttat cgtttctgcttgcagctcaagaggtccaacatctaaaaacacgacttggaaaagtcacaacagaaaataaagttttgaag gatttattgaagaaaaacaatgtcaccattccgagaaacattctcccgatgtcggattcaacttcggcgatgacaggcct tgaacgaattaattcatctgttgctgtgacagtaaactcaaactcggaagcggtaaccatggcaacatccaagactttgc aggctgagattccagtgacagtaaagaccactcctgttgttaccatggtcactcaattgccagtcgctacggcaactgtt gctggagttcaatctagaaaagaatcagttgcgtatgttgcgccttttttcattgcaaataacccagtttccatagtaac aagtgcaacttgtcttgttacaccagcggtaacttctgctatgtctgttactgctccgattgcgcataatgccggcagca gccaacatagccacgttcaaggacgcatgtccaattctgtaactttatcccacgtaaatcaagggatttactctcagctt gcgaataatttgatttgttcatcgactccccaaccggttcaagctttacctgtgccagtttgctcttcacaagtggcaac aagtccccaggcgggtttttcacaacacagtgttgcggcaatcatgaaagttgcgcttcaacctggaacttcagtttctc cagtcgctgtcgtagatgcttcttctctttccactccggccgtggcaactaatgcaactgct |
Protein
Protein ID | aug_v2a.22906.t1 |
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Definition | - |
>aug_v2a.22906.t1 ERRRKDKINKWILKLAQAVPQCKWGKQSKNIVLEKTVEYINEVNDQLKELGNSQQREQKLAQEVQHLKTRLGKVTTENKV LKDLLKKNNVTIPRNILPMSDSTSAMTGLERINSSVAVTVNSNSEAVTMATSKTLQAEIPVTVKTTPVVTMVTQLPVATA TVAGVQSRKESVAYVAPFFIANNPVSIVTSATCLVTPAVTSAMSVTAPIAHNAGSSQHSHVQGRMSNSVTLSHVNQGIYS QLANNLICSSTPQPVQALPVPVCSSQVATSPQAGFSQHSVAAIMKVALQPGTSVSPVAVVDASSLSTPAVATNATA |