Gene
Gene Model ID | aug_v2a.23957 |
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Locus | scaf17588 : 1006 ... 8616 : + |
To GenomeBrowser | scaf17588:1006..8616 |
Genes list of scaffold | scaf17588 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-70 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains NB-ARC and NACHT domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.23957.t1 |
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Definition | - |
>aug_v2a.23957.t1 cttctcctgacaaggatcatgatcctcagggaggaatgaagaggaaaagaaagaaatgcagcaatcaggacaaagcaggt gaagtagaaaaggtttttaaagcttggtatccatcccgccagttttcttgatatttgtctccggaatgtgtttttggaat agttgatagacttggcggtccactttgaagtcaaacgttcacagaacttggagaaatttgaattggaaaatggcagaaaa gcagaattattgaacttctggtcatttcacctttatttaagtgttgtacttcacggaacccgagcttatcaggatcgaaa tttccaatgaacaacagtcgtttatcaaacgcaacagcagctaccaacgttcttttttatcaaatgtctgggagagagca gcttagaacaacatgtttaaagctctagtacgcgattcattatttcgaacggttctgatatttgttgcttgaatgttgtt gccaataatgcttagttttcactgaatctacccttgcctgagggtaacattgtacctggcttattttatcatcaattagt tactttaattggccttaaagtagcaagaagcgatgtttaacaacaacaactgaatctaaaagatgatgtaaatgagatgt tctctttctattcagtaagagttactgcaaagggctaacgcttgaaaagtaggccatgttatcttgtcgcggtgaatatt tgactcatatcaacttgttatcagatagcaaatgttggtgcttgacttccccaccgttacggcagcttgtagaagattct ttagaaactaaaacttttgcttgttctatgcaatattggtttttgcttgaacgaatactccaaaatatggtgagacactt cgtgacacataaacaggtacaagcagataaacgacaccctatttaggcagagaataactgctggttcagcccatcttcta actatggtcagccactgatctctagtgattaggtctaagcgccggctcgaaatggttagctttcatagattgttagggtt ataccataattaaacttggtaaacctttggtaagactactatggtcggttggtactttatatacataaatttaagtgtct caccatattttggagtatccattctagtcacaaccatgtaatattcgtgtcactgatcctttcaaattcaattttcatag taatagaaatttccctaggcaacctatttcaacattacatcaagaataagcgaaactgaacacatttgatttttgacgta tcctgactttcaacaattccatttgaggcgataactttatcgaccccttatctagcaaatcaagttctcttcaggaaatc atttttcatcgccatccgatgggccaattgattttgaatagaatcaccgtaaagcttggtgttcatgtaatcgcagacga tcgcggatcgcaacacgttctgttgcgatcgtctgcaatcaatcatttgtttttgaatgtcaaatcaagaacttccggtc gccatctcaagtgattgaaaagagaaaataagttcgcctgtagcaagagtttcttttcggtgtccgcgattggttgctct attaggatttgagtagcttatggcgatctatctgcgagcaagtttcaccttgtttattatgatgtatcaaaagatcaaag cagtttagatggatgtgttttcgccgctaagccgagtgtttgaacggcttcaaaaatgtgtgtcgagacgcgtgtctcgt cggaattcaaacaattgcattatcatgtattgaggaaattatcaaacaaaaatcaagcaaggtgaccttatgaacagcag ggtaattttaaaagcatgctttttccttcagtccttcttctttgttgtcgatggttggtttaatgtgtcgtgtaagagaa ggttcagagaatttaaaactgctgatgaagaaaaagcactgttagaaaaatccaaaatcgacacgatatgtcccaaagtc gtcttgtcataaattgtttgcacattcagccctgcactctcctagcactaaaaccaaagctgccaccaggcttttcaaaa ggaacgtatattaccaggtataaaagttctcatacacctgatcgattggcacgtgtgataggctcataaattattcaaat ttttttactgtaatataaggttaaatcggatgaatctaccatgtcaaaacaaagttagtgaatgactcagatattaaaat agtgaatagctcagatattactcagactgattattccatatagtgaaaagaaaacataaacacagtcaatggaagactca catctagtgtcgatctctctctattgtcttcttagttaaatcattgatatcatttttaatttcttttgactgtaactttc aatttaccgtaatttatttcaatagatgcttctggcggaagtcagatctcagcccaggaaggtgtggagaggagaagcac atccattgaagacagaacaggtgaaagctgtttatttcaaacgattcgtatagttgttgcttgaatattattgatttgaa aatagctcattcaatcgttttattggactgtacatccggaaagtattggttaatgaaaggacttgatttcaaaatgagtt tgattgacacttactacacgtgaatcataattatagtgtatataataacgggaacctatatctgcccttaccagggatga gtgattggtgaacattataacttatttaatcataaaaattacaatttcctctactgtgattggttaaaaaaaaactctta tttcccactaattgagtagccaagtcgttatcggacagcttgttatgggtgagtttgttatcggacagaccaatcacatt caaagttgtaatttaaatcagccaatcataaccttggtttcaatcaccatagaaacagtgtacaaactcctaaactgtgg ctttcttcaaaatggagaaatttttttctatttttcttttctcggaaattgtaatttttatgattaattaataatggaac ttcgtgtcgtccaattcagtctgtaatcatactcgtgataaacaaatcggactcccgctgcgcggtcgtccgattttgtt atcactcgtatgattacagaccgaattggactccactcagtcctattaccattacttatcgcacatatgggtctctgaaa ttagccttaaagttgcaagaaacgatattaaacgacaaaactgaatcttaaagatgtcgtaagggagatgtcaaagacga gcagtgacaaaaaggttaaacgtgaggtggtttcggtctaaacctgaaagcccttgtgcttccggtagacaatacttata ttaccttgtgagctcggtttaagcaaatggtgattgattccctcgtacaaaatccacagtttgtaacattttctcttttt acgcggggacttaaagttgctcagaggccaaaaccctgctggggccatgagtattaataactgatgtttttgttatcatt gttattgctatcattattgatgtttgcggtgtaatttgctaacgcttttctttaccgttactgttttattaggctattct gacaaggataaggacattcagggaggaatgaagaggaaaagaaagaaatgcagcgatcaggacaaagcaggtgaactaaa tgaaagttttcacacctgggcgaccatcccgccagttttcttgatatttgtctttcggaatattttttgggaatagttga tagaaatttccacattggagccaaacgatcacgcaactccgtgaaattatagttgcggaaaggtggaccatttgttaaac ttttggttagttacctttattcaagcgtcttacttcaccatactctaagctttaattcttttcatttgtacttcataccc gttaaacagggagtttttggttacgggttgccctagtaggatttgagtagccattggcgaccgacctatctacgtccaag ttttaccttgtttgttacgtgatatcaaagatcaacaaagttaagttggatgtgtcttcgccgctaaagccttatgttac atcttacccaggagatccaagccacgtcataaagtggatacaacaagtttacgaaaagtgtgaaggggtgattttgccag ttccttggtgtgacagattcagctttcagctcgagaaaattttcaccagactaaggatagttgcaaaagaaaagacacgc ggaaaagtgacaaaagaagtgacgagcatgtcaagtatctttacaccacacgaagattgtcaacgcccaagggttgtgtt gattgaaggcgagcctggcattggaaaaacgacctactgccagaagttggcatatgattgggcaactagacatggtcgcg aatggcatgagtcttttccaagagttgaagtgcttctgctcctcagatgtcgtgacattgaatctaactgtatatggaaa gcaattgatcaaattttacgcgagggcattgaaccagaggtaagaggaacgtttatccagttcctccaagaaaatccttc caaggtgttgttggtgctcgatgggttagatgaggcagaccaagaaaaactgaatctcgtgcgtaaactgattcaaggaa agctgctccctggttgtttcgttgttcttacatctcgccatgaagctggaagtaatatagtgccacacactgacactctg ttggagatcgtgggattcacgacaactgatgcagaatgttttataagaaggtactttcaacaatcagactatcaacactt ggcagcgacactcattgcaaaactggagtcagatgatttaaatgaattaacaagaaaccctctaaatactctcctactct gtgttatctttgaggatcttaacggggttctcccaaatagcagaacagagctgtacttagagatcgtccaacttgttttg agacgttatgaaaacaagaatggcttgtcagttaatgataaaaaccgccttttagtttacaagaaggaattgatgatcct tggcagaatggcgctagattctctgagaaaaggagagctgtattttgaagaccatcaaggcgatttcaagcaaagcttat tacctaaattaggctttgtgtccatccaggctggaggtggcaagagagcaccttgtcctcgttacgcattttttcacaaa agttttcaagaattcttttccgcctttttccttgccttttctatgattgatggtacaatggactgcaagtcagtggctaa taaagaatacgaacaggaactaagggaagtgttcacatttatgggcggaattatagccatgcattctgaagcaactgctg tgtcaattgtaaaaagcattgtatcacttgtaaatgtgtcagaccgcaaatcccgagagaattgcatgtacctgagactg gctttaagctttataagcgaatccgaacttttgtcaaaaaacttgtacgcagaattagctcatttatttggcaagagtct tgagctcgtagacttgaaagcgcgcctctttttcgaccgacaattcagtacgctattctttgccttaagagtaaacacct ctctgacttctttggatttgatttgcaatgatgaggaagtgcattccctatctgaggccttaagagtaaacacctctctt acttctttggatttgtctctcaactttattggtcatgaggcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgaactccattcatgctgagggagccaatt tcctatctgaggccttaagagtaaacacctctcttatttctttgtttttttgtttgcgaaccccattggtaatgaggaag cgcgttccctatatgaggccttaagagtaaacacttctttggatttgggggtggaccccgaacatgtttagagcgctatt tccccatctcggcgttaagagtcaagacctctcgtcatccttaagattggtttttgagggttagacgtaaaggtaacgca cacacaggttaatagttaataattgtggtgatctggaccctcgcatacggtaaaagtagaatattggataccacagaaaa tttctctgcctgatgggtgaattacacgttaaatgtaaggcgaagaaccttttatcgcacgaatcggtttttcaagacaa tgaactttgaattaataataatgttcttcctctgccaccgaagcgtcggcttgaacgctttagctgacgtggatgtcatg ttagttttccttacaccattttgtcttccttgtcaaggttttagtttaagaaaaggaagaatgaacgtgttgtttttgct attgttgttgttgtttctttttttaacatttgtagtatctttttcctctcaatgattagctcaaggattcttgataggag cctccctatgttgttcgtatattagatgaattagagttaacagttaaatttatatttggacacgaatatggtgaagatcc atagatagggtgctctagaacctaacgcgacagagtttatttttatttttaatcgaggtgcgtggtgtagcacatgttat tgtcatcgtttggatcaaatcgagttcctttcccaaagataacgcaaatgaaatttaagaaatttctgctatataaaatt cttttaaagag |
Protein
Protein ID | aug_v2a.23957.t1 |
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Definition | - |
>aug_v2a.23957.t1 SPDKDHDPQGGMKRKRKKCSNQDKADASGGSQISAQEGVERRSTSIEDRTGYSDKDKDIQGGMKRKRKKCSDQDKAGDPS HVIKWIQQVYEKCEGVILPVPWCDRFSFQLEKIFTRLRIVAKEKTRGKVTKEVTSMSSIFTPHEDCQRPRVVLIEGEPGI GKTTYCQKLAYDWATRHGREWHESFPRVEVLLLLRCRDIESNCIWKAIDQILREGIEPEVRGTFIQFLQENPSKVLLVLD GLDEADQEKLNLVRKLIQGKLLPGCFVVLTSRHEAGSNIVPHTDTLLEIVGFTTTDAECFIRRYFQQSDYQHLAATLIAK LESDDLNELTRNPLNTLLLCVIFEDLNGVLPNSRTELYLEIVQLVLRRYENKNGLSVNDKNRLLVYKKELMILGRMALDS LRKGELYFEDHQGDFKQSLLPKLGFVSIQAGGGKRAPCPRYAFFHKSFQEFFSAFFLAFSMIDDELELTVKFIFGHEYGE DP* |