Gene
Gene Model ID | aug_v2a.23991 |
---|---|
Locus | scaf17640 : 8866 ... 18000 : + |
To GenomeBrowser | scaf17640:8866..18000 |
Genes list of scaffold | scaf17640 |
Manual annotation
Study field | Flagellum |
---|---|
Gene name | Adi-DHC-f7-46-63 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See chlamydomonas DHC-alpha (AAA57316) and DHC-gamma (AAA50455). This is probably a fragmented gene model. AAA9 and Dynein_Heavy domains were found by Pfam search. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
---|---|
dynein heavy chain axonemal-like | GO:0000166 GO:0003777 GO:0005737 GO:0005929 GO:0006928 GO:0008152 GO:0030286 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.23991.t1 | gi|12224948|emb|CAC21651.1| | hypothetical protein [Homo sapiens] | 0.0 |
aug_v2a.23991.t1 | gi|591348421|ref|XP_007052766.1| | PREDICTED: dynein heavy chain 6, axonemal-like [Chelonia mydas] | 0.0 |
aug_v2a.23991.t1 | gi|573883869|ref|XP_006630086.1| | PREDICTED: dynein heavy chain 6, axonemal-like [Lepisosteus oculatus] | 0.0 |
Transcript
Transcript ID | aug_v2a.23991.t1 |
---|---|
Definition | - |
>aug_v2a.23991.t1 ctattttcaagtcttttctgttcttacttttcaggataatattcctgatgctatgttgaagaagttaaaaaagtacatcg acaacccgaaatttacacctgaaaatgtagaaaaagtgtccaaggtagattaattatgtgttctctttttctaagtcatt accaagtctaatgccttttctaatatttttgttcttttggttcctgttttgtctatttgttaattttacttctctttaaa ttagtttttgttttgtttttttctcaggcttgccgctctatggtgatgtgggttcgtgcaatggacttgtatgctagagt ctttcgtactgttgaacccaagaaaaagaggtaataattatgacagatgaagttcgtatgaagttgatgattttgtgctg caaaattatgccagagtttgaacagaagtgcctttgattatgatgttccctcccttgccattttatgaagaacttggaaa agttagggatctccttcaatggcacctcaaatgttacttgctatctaactccaacttgtaggacattatgtctttgcaag tccagtaagtctaaaggaatgttcaacagtagagttggtcaagtaacttccagtgtttaactgaaaaatcactactcagg ttgctttcttgaaagatggctttcttggaagtctttaaagatcgcatattctatccgtagacttgcagctgcacaagtgg aattggatgcagttatggcaaccctaaaagagaagcaggatagcctggcagcggtggaagcaaaggtaattttgaagtag tttgtcctcatagtaatcttggatctaacataatgctcaattgagtgccattgaattttaattgtttattaagattgctg agctccaagcatcctatgacaacagcattacagagaaggagacactgacaaaaaacattgcacagacagcagctcgactc aaaagagcgtcaaaattgaccactgcgttgggagatgaacaagagcgctggacagaaaacgtagcggtaggtaaaattaa atggaagatgtaccattaaaattaatattgagtaaaaggagaatgctgcttcagcaaggaataaattatcagccactctg tttcaactgcaaaggaaaccagtagttgctgtgtatgaggttggacaggcttcctttgtctgggaatttaagttgatagc ctttgagtgggtgttctttcaactggtatttctctctctccaacatttaaattaattgaccattcattgcctgtataaac aaaaggcaactcatgtgatcaaatattaaattttcaaatggagtgtcnnnnnnnnnnnnnnnnnnnnngtattcttttat tgtaatcaaccaggcctttgagttggagattggcaatgtggttggtaatgtgtttgtagcagcagcttgcgtggcctatt ttggagctttcacaagcctgtaccgtcatgaactcatctcctcttggattcagcggtgcaaggagttggagnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttcttttca tataggtatctattgagaatgccatcttagtaaccagaggtcgccgttggcctttaatgattgatcctcaagatcaggta atgttgtgactaagtacagtaaaagctaggctacttgaagagagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnatactgtaattatactaattgtagtactaattattgtcttgtgttttatttattcagttagaatg cagttattttttaatagattcttgtaaagcgcttttgatcatttatcatgttaaaaggcgctacattaagtggaannnnn nnnnnnnnnnnnnnngctgatttgctcactttaatttctttcctgcactcaaattttaaggccaatcgatggattcgtgc aaaagaagccaagaatggactcaaagtgatcaagctcactgaccagaactttctccgcaccctggagaattgcattcgca ttggtatgcctgttcttctagaagaggttggagagactctggacccggctttggaaccaatcttgttaaaacagactttt gtgcaggtgagccagttatggtgtacaagtaggtagagtgatcaatggcgtgagggaggtgagagatgcaattacttttg ggttctgaactcatctagatctgtattaccctcatccttgcaacataataattatgttatcatattatgataactcctgg atgaaagaaaagccattccatatgctttgctatagtacaaagcaaaattagtgtaatctggagtttaataccaatctttc caagggtatcatccatcctgcgtacattcttagcacaaaaggttatttcattttgaaaatgtgtcagtaagcctgtaaac aaattgttattgtgcttgaatagctgttatcacagttgtacccatgggcaaaacctcctttgtttatggtaacgtgcaga cgaggcttatgggtcaatacaatggaaaatgaccctttagccttgttaaaaccattgataactgcgataagagctattga tgtagaatgtggaattagctattgttttcagttgaccaatcagtcaacggactaactgacaactttcttattctagagat gattcctgtattaaaatgggtttttaaagtatcagaaaacaatgcttattgggattacgctttcaaacctatcagattct atttgctaaggtttgtatattgtgtcttcagtatcaatcacttttgtacttttcttgcagggaggtcgtctattgattcg tctaggagacagtgatattgactatgacaagaacttcaagtaggttacgttgtttctttcaagattcataactgcaaatg tttcatgttgaaaattaattattattgtaacattggtttatttaacttttttcatataattattttgaatttgttagtgt tttggtatccatgcattaatgttttggtacttttgaactttgtagttactattctaggtaaccagctgttctctccctct tttgttcaacaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctc ttcatcagagctaattgttctctagctagaaccatactagtttcttttgaaacgagaaatttctttaatgagtggatgat tgattttttgttgcatttcttggtgggtgacctttgcattccatctttgtacgtaaataattattagttttgttcccgtc ggtttgaattgcttatataatttatttgttacttaagccagaaacatgtgctataatgacaaatcatggaaatcttgttt cattatttttttctttgttctttccagtggcttgtttgaaaaagacaagttagtgttttcattcatgctatgtggtgaga ttatgcgacagaagggagacatctctgataatgaatggaacttcttcctgcgaggaagtggaagtttagacaaggtaaga agactgaggaattcaaaggttttgtgcaaagaaaagaagaggcagttgaactcatcaactgtaaaagtgtaaaattttct cataaaaagagtgtcaacttgttgcttgataaaactttaactccaatttttgtctgacatgcaataagcaaattcgtgaa gagaacacaaattaactattttgcaaaaataaaattattgatacaactttgcttaattacactgtttttacaaacagtta cttactgtttctgccttaaaaatcaaaaggattgaaaattaactattcatttcctcggtatctgactttgttaaattgta tttatttttggaattcattttatctgtacaacagctgcttggttatctgttctgcactacgtactaattttgtttcaatt tgtttgtgatgaaggagcgacctccaaagcctgatgtttcatggctgacagaacatacatggcacacatgctgtgatttg gaggtgaggataagtttgacagtgttttattgcatctgtttataatttttgaaaatgactgatatgtcaatgaaaattgt tgaaaagcactgtacctctttttgaacctataagaggtgggcaaaaataaggatgacttgtgtgataactttctgctaca cttttgcctaagaatgttggtctcaagttgataacttgtttagccatctggacttgaacagttagacaccttgttgatta ttcnnnnnnnnnnnnnnnnnnnnnnncttcctgtttacttttaggacttcttgcctgctttcgctggactgaaagaagag atagtaagcaagccagtcattgttaaaattggatcagttgaggtaaagtttgttagtgtttcagctttatgactcattag tgcatgtagtgtcttctttaaaataactttaacaatggtccttcaannnnnnnnnnnnnnnnnnnnttcttcatcagagc taataattgttctctagctagatcaatactagtttcttttgaaacgagaaatttctctaatgagtagatgattgattttt ttgttgcatatcttggtgtgtatttgcattccatctttgtgggtaaataatattatcattagttttgttcccgtaagttt gaattgcttatatatttgttacttacaccagaaacatgtgctataatgacaaatcacggaaatcttgtttaattttttct ttgttctttccagtggcttgtttgaaaaagacaagttagtgttttcattcatgctttgtggtgagattatgcgacagaag ggagacatctctgataatgaatggaacttcttcctgcgaggaagtggaagtttagacaaggtaagaagactgaggaattc aaaggttctgtgcaaagaaaagaagaggcagttgaactcatcaattgtaaaagtgtaaaattttcacataaaaagagtgt caacttgttgcttgataaaactttaactctaaccatcatagagtgactccaatttttgtgtgacatgcaataagcaaatt cgtgaagagaacacaaattaactcttttgcaaaattaatgcaactttgcttaattacactgtttttagaaacagttactt ctgtttctaccttaaaaatcaaaggattgaaaattaactattcatttcctctgtatcggactttgttgtatttatgtttg gaattcattttatctgtacaacagctgcttggttatctgttctgcactacatactaattttttcaatttgtttgtgatga aggagcgacctccaaagcctgatgtttcatggctgacagaacatacatggcacacatgctgtgatttggaggtgaggata agtttgacggttatttattccatctgttcatttttgaaaatgattgaaatgtcattgaaaattgttggaaagcactgtac ctcttttttaacccataagaggcgggtaaaagtaataattaataaggatgacttgtgtgataactttctgctacactttt gcctaggaatgttggtctcaagttgataacttgtttagccacctggacttgaacagttagataccttgttgattattctt aatattaattttagttttttgttcctgtttacttttaggacttcttgcctgcttttgctggactgaaagaagagatagta agcaagccagtcattgttaaaattggatcagttgaggtaaagtttgttagtgtttcagctttatgactcattaatgcatg tagtgtcttcttcaaaataactttaacaatggtccttcgaagggaaggaaatattttgctaccacaaaaacggcaatggg aggtggtgtgttagcagtgccatgtcaccctagacttgatttgggtttaaacaagtgtttgttccctactttgcaccaat agatttcttttctgttacctgtgttttccctgttatcaaaagccaacatttgatttgaataaagagctatgttttctatc tgagctgttgcaagtgttacatgcttctttaagtaaagaaatattaccggtatgnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccaaatgttaatgcagttttgtttgggactgaaataccatcccacttg ggtcagggaagaggtgatgtctattaaaccctgtttttttataattgtcctctcaggcctgcccaaatcctgcattgctc tctgagagtaattcagatgatggccgcacaacagctacaagtgaaagtacagaagccgctgctgaagaaggtgatgaaag cccagtcagttttggtgagcgtctaacaagtttccagagcttgatttttgtgaaagctttcagagaagagaaggtaagtg gacaaaagctcatatcaaaagtgttttgttctttgtatgcatttaagccaaactttgttctcccttaggtcgtgtttgcc tctgtggattttgtgtgtgaaaatcttggcaaaacctttgtggagagcccatccattgaccttaacacactctatgctga tgttggacccaccactcctcttatcttcattttatcaactggatcagatcctatgaatgccttccttagatttgctagag aaatgagctacagtgaaaggtaagccacaagaaagtgatctttccaataataatattattattgttgccttgtccaattt cagctgctttgagtggttacaatcttccaatttcttaagacaccattgttctagatgtggtacacaattcttcttataaa aattgtgcagaagcagtgnnnnnnnnnnnnnnnnnnnnnctttctgtctgtaggatccaggccatctcgttgggtcaggg tcaagggcctgtggcagagaaaatgattgctaatgcaactaaaacaggagactggatcttcctacaggtgaaattcagta aaatatgattaactggttacctttttgatacagatttcttgctggagttaactaggatttacttttcaatacatttcacg actcttaagctagca |
Protein
Protein ID | aug_v2a.23991.t1 |
---|---|
Definition | - |
>aug_v2a.23991.t1 MWLVSIENAILVTRGRRWPLMIDPQDQANRWIRAKEAKNGLKVIKLTDQNFLRTLENCIRIGMPVLLEEVGETLDPALEP ILLKQTFVQGGRLLIRLGDSDIDYDKNFNGLFEKDKLVFSFMLCGEIMRQKGDISDNEWNFFLRGSGSLDKERPPKPDVS WLTEHTWHTCCDLEDFLPAFAGLKEEIVSKPVIVKIGSVEVNGLFEKDKLVFSFMLCGEIMRQKGDISDNEWNFFLRGSG SLDKERPPKPDVSWLTEHTWHTCCDLEDFLPAFAGLKEEIVSKPVIVKIGSVEACPNPALLSESNSDDGRTTATSESTEA AAEEGDESPVSFGERLTSFQSLIFVKAFREEKVVFASVDFVCENLGKTFVESPSIDLNTLYADVGPTTPLIFILSTGSDP MNAFLRFAREMSYSERIQAISLGQGQGPVAEKMIANATKTGDWIFLQVKFSKI* |