Gene
Gene Model ID | aug_v2a.24095 |
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Locus | scaf17768 : 12776 ... 17690 : + |
To GenomeBrowser | scaf17768:12776..17690 |
Genes list of scaffold | scaf17768 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 85 |
Description | This gene model contains Retrotrans_gag, RVT_1 and rve domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.24095.t1 |
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Definition | - |
>aug_v2a.24095.t1 atgattatgcaatcgaatgaggtattatcatataacaattgtaaagcagagagcacatgtctcataatacaccaagttga ttattacatctgtgtcttcacttatgtctttctaacataaagaacccttcggttactacattggcgacgaggatcctagg aacaagaaagaaagaatagaagagtatccacaaaatgactgaaacagcctcaggcgctacacagcacgcgcaactgcaac aaaacatcacagtggtaaatcgacaactaaatatccgaccgttcaatatttcaaacgatgcgaacgacacagccgtacga tggacgaaatggaaaaaagacatcgagcgacagttcaggttcttcggactaaccgatccagaagtaaagaaagacggatt gattatctacggaggaccacaaatcgccgacttagaagaatctcttccagatttaccgccacaagagagcgaggatgtct actcacgattcattcggaagctagacaggaactttctaccgaggaaaaacaaagactacgccagattccaattcggaaac ctttcccaagaggctgatgaaagcatggcaaaatattatgcaagactccgtgacatcgcgaagaaatgtgagttcaatga tgaagatgacgcaataagagatcatctcatcaaaacgatgaacaccaaccgaatacgagtgaaaaacaattcgcaacaat tggacactatcccaaatcttagacgaagcagccgtagaagaggaatccactgctcaagcacatgagatagacaagaaact ccatgacgcgacggaatttcagaagatcaaacacatcacaaaggacaagcgtgacaggagcgcgacgtgctatcgatgtg gatcaaaacacgcgaggggaaattgcaaagcttacggagctaaatgcttcaaatgcggtaaacggaaccactacacccga atgtgccggagtacagatagcagagaccgtacagaggagaaaagagacaaatctagtcaccgagacgacaagaaagaaga ttttccgcgtggaccacgacacgcaagaccgccgacggataatcaacaccgccatcgacgagttcaacacgtacaacaag aggataccgaagaaaggtcaacgaacgcacacagcggttcagaaagcgattcgcttgacaaagacatcgcgcggattatg cagcacatgaacgtccaccgcacagcacaaacaaacgctaagaaacacaaatgcaagaatgcaaacatggaaaacacggg cgaagatcgcagtcattcaagggaaaatcgaatctctacccttactcggcagacaaacactggaagatttggggatgatc aaatttgatgcgaagggaagactgaagcaacccaaccgtgatgaaacccagaccatcaacaaagtacaaagcggaaatag agacctgcataggattttgcatcagcaaaaagggaggtttgaaggcatcggcaaagcaaaacgcgacggagaagacatca acatccacttgccgcttaaggatgatgcacagccaattgcacagaaaccacggagagtaccataccatctgatggaaccc ttaaagaagagaatggaagaattcgtagataaagacatcatggaaaaggttccagaacacgaatccatcacttggtgctc accgctagtcgtccagccaaaaccaaaaaatcccaatgacatccgcgttagccttgatctgcgagtgctgaacaagtcca tgcagcgcacacgacaagtacaggcaccaatcacagaggatttcatcaccacattcaaagattgcaaagtctttagtaag ctggacatgaaccatggataccaccagttcccactagacgaggaatcaagaaagctcatgacattctcaagtccatgggg taactatcgctacaaacgacttgccttcggaggcgtgaatagccaggatttatttgacacagaaatgagcaagatcatct ctgggataccacgcgtcctcaacaatagagatgacattatggttggcggagccgactgggacgaccataatgctaaccta accgctttattacagcgacttgagacccacaacttaaccttacgcaaggagaagtgtgaattcggcaagtccacgattga cttccacggacatctgttcaccgccgagggactgaaacccagtcccagcaaagtcaaggctgtacgtgaatgcagcccac cgaaatccaaggaggaacttatctcatttttacaaatgatggcatatttatcgagaaacatcagcaacttctcgagccgt tgcgaacctctgagaagattaaccaagaaagagcacaagttcgaatggacagaggcccaacagaaggcatttgaagactt aaagacagcaatcactacagcacctgttcttatcccttacaaaccgggacgtgacaccatggttatctgtgatggaagtc cgactggccttggaggtggcttatttcagaggacagaacatggctaccaaccagtacacttcgttagcagatcgttgaca gataccgaaaaacggtactcacagatagaacgagaggcattagcagcagaattcacaactacaaggctgcacatgtattt aatgggaacgcaacactttcagctagcaactgaccacaaaccgctcctcccatttttcaacaacccaaacgctaagctgc cacccagaatagagagaatggtgatgaagatgcagaacctcgacttcaccgcaattcacatacctgggaagtccaatatg acggactatctatcccgacacccattaccagaggtagaaaagaccggccatgagcgacacgtcagagcaattattgaaac agatcatgcagtagtcatggaaactatccagtcagcaaccaaagacgacagagcactccaaaagctgaaaaacnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttgaagcagacttctgcgggccattccctaacgg cgagtatgtatttgttttaaccgaccagtactcaaggtaccccgaggccgaatttatcaactcaacatcgatcaagccgg ttcgaagaaaactaaagaaaatcttcgctacgcatggagtaccgaaaacagtacaaacggataatggaccaccattcaac tcaaaggagttccagacactcgcaaaagaaatgggattcaaccacaagaaggtgacacccagacatctcaaagcacaagg acaggtggaaggttttaacaaactcgtaaacaagacagccaccattgcaaatcaggagggaatagaagtacacgaagcaa cctatgacatgcttcaagcttacagagacacgccacacccagctaccaagatgactccctatgaactaatgatgaataga gaagtccggacgaaaattgaacagtttccttcggaaacatcaccaaaggatcaggaggccagacgtaatgaccgaaacta caaggagcgaatcaaacaataccatgacaagcgataccgggtaacacaacttcaacttgaagtaggacaagcagtcgtca tcaagcgagaaaagaaacggaaagctgagacaccatatgaactacacatctatctggtaatcaaagtgaaaggatcgacc atctatgctagcagactaagcgatggtaaaacaatctgtcgagatgcatcgaggttcaaactgctgaaaacagacacaag gagcacaaacgacgaagaagccagaatgctgaaaccgacacagataccacctgcatactgtccccagcaaccagaaatag caacacagaggaatgaggcagttggcaatcatgagaacaacagtcaggccgcaccggagccacagcttaggcgatcacac agaacacatagatcagtgtttgaagggcacctaagagatttcgaacagcgctaggtttagactgacttgagcgctgactc aacattgaatatgaacacgaacgttgaatttgttgttgttacattaagtaatcatcctgaatcataactctatttgttga catgagatttaagctgattttaaattgattatatgtgcatttatagtcatacggaaatgtaactgaaaagggaggaatgt agtaatatgatagtacatgattatgcaatcgaatg |
Protein
Protein ID | aug_v2a.24095.t1 |
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Definition | - |
>aug_v2a.24095.t1 MTETASGATQHAQLQQNITVVNRQLNIRPFNISNDANDTAVRWTKWKKDIERQFRFFGLTDPEVKKDGLIIYGGPQIADL EESLPDLPPQESEDVYSRFIRKLDRNFLPRKNKDYARFQFGNLSQEADESMAKYYARLRDIAKKYEAAVEEESTAQAHEI DKKLHDATEFQKIKHITKDKRDRSATCYRCGSKHARGNCKAYGAKCFKCGKRNHYTRMCRSTDSRDRTEEKRDKSSHRDD KKEDFPRGPRHARPPTDNQHRHRRVQHVQQEDTEERQTLEDLGMIKFDAKGRLKQPNRDETQTINKVQSGNRDLHRILHQ QKGRFEGIGKAKRDGEDINIHLPLKDDAQPIAQKPRRVPYHLMEPLKKRMEEFVDKDIMEKVPEHESITWCSPLVVQPKP KNPNDIRVSLDLRVLNKSMQRTRQVQAPITEDFITTFKDCKVFSKLDMNHGYHQFPLDEESRKLMTFSSPWGNYRYKRLA FGGVNSQDLFDTEMSKIISGIPRVLNNRDDIMVGGADWDDHNANLTALLQRLETHNLTLRKEKCEFGKSTIDFHGHLFTA EGLKPSPSKVKAVRECSPPKSKEELISFLQMMAYLSRNISNFSSRCEPLRRLTKKEHKFEWTEAQQKAFEDLKTAITTAP VLIPYKPGRDTMVICDGSPTGLGGGLFQRTEHGYQPVHFVSRSLTDTEKRYSQIEREALAAEFTTTRLHMYLMGTQHFQL ATDHKPLLPFFNNPNAKLPPRIERMVMKMQNLDFTAIHIPGKSNMTDYLSRHPLPEYSRYPEAEFINSTSIKPVRRKLKK IFATHGVPKTVQTDNGPPFNSKEFQTLAKEMGFNHKKVTPRHLKAQGQVEGFNKLVNKTATIANQEGIEVHEATYDMLQA YRDTPHPATKMTPYELMMNREVRTKIEQFPSETSPKDQEARRNDRNYKERIKQYHDKRYRVTQLQLEVGQAVVIKREKKR KAETPYELHIYLVIKVKGSTIYASRLSDGKTICRDASRFKLLKTDTRSTNDEEARMLKPTQIPPAYCPQQPEIATQRNEA VGNHENNSQAAPEPQLRRSHRTHRSVFEGHLRDFEQR* |