Gene
Gene Model ID | aug_v2a.24126 |
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Locus | scaf17806 : 12587 ... 14875 : - |
To GenomeBrowser | scaf17806:12587..14875 |
Genes list of scaffold | scaf17806 |
Manual annotation
Study field | Transcription Factor |
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Gene name | Adi-clock2 |
Description | Named thus based on BLASTP results against NCBI nr and molecular phylogenetic analyses (NJ and ML). |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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circadian locomoter output cycles protein kaput | GO:0001047 GO:0006355 GO:0007623 GO:0044424 GO:0044707 GO:0044763 GO:0051716 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.24126.t1 | gi|156402728|ref|XP_001639742.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.24126.t1 | gi|524915252|ref|XP_005112430.1| | PREDICTED: circadian locomoter output cycles protein kaput-like [Aplysia californica] | 1.4013e-45 |
aug_v2a.24126.t1 | gi|637305982|ref|XP_008109890.1| | PREDICTED: circadian locomoter output cycles protein kaput [Anolis carolinensis] | 3.00018e-42 |
aug_v2a.24126.t1 | gi|556964260|ref|XP_005991927.1| | PREDICTED: neuronal PAS domain-containing protein 2-like [Latimeria chalumnae] | 3.00018e-42 |
aug_v2a.24126.t1 | gi|602637080|ref|XP_007425389.1| | PREDICTED: circadian locomoter output cycles protein kaput [Python bivittatus] | 8.00001e-42 |
Transcript
Transcript ID | aug_v2a.24126.t1 |
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Definition | - |
>aug_v2a.24126.t1 cgttaataaaaagaacaattgttgatgagataactaccccaaaaatattaaatccctggtgggaacagtcagagtagttc aggaacctcttctgcaacatatggccagcgacgaaatcaaacgacgcaatgaaacggagaaaaaacgtcgcgatcgattc aatagtttgatcgacgagctcgcaggattcatttgcgaccgctgtaaaacaaagagaagcaaacacaagtgttcgatttt gaaaatcacgaaagaatattttctcgagcaagaagaacttgctggtcagaagacttcgcaagacccttttggatgggaaa aacccgattttctggcagacgacgagctttgcttcgtgttgcaggaatcatctagggctttcgtatttgctgtggacagg gagagcaaaattgtttacacttcagacagtgctctcaatgcggttggatatttgccttgtcaaattttacagcggagtat ttacgattttattcatcttcagtaccatttcatttttcagggcttgttgtcgaattttttgatatcctcggttggtgata ctaaggtttcccaacgctttgaaccgtttttatgctacttttgccgcggcccgtacgcccaggaaaagggtttcgaagct gtcatttgtcaaggaacaatctttaaaaattcacaagccgacgagggtcaaacactcgaagattctcattatattcttgt gttggcaaaaccattaaatcgagtatcgacaaacacgacactcgtttgttcagatggtccacaaacaaaattcactgcaa ggatttgtgttgttggaaaatacgaatacctcgacaagcgagtggtttccgttctgggtttcttcccttcagaattaatc ggaaattcatttttcgattactgtcaccccgaagaccttgaaaatttggccgagtactgcgaaattcttctcatgacagg gagactagccacttgctactaccgtcagctaacaaaggcacagtcatggatctggcttcgatcgcttttcgatctgagtt acagcgattggagctccaagccgcaagcaataacttgtctctcttgggtggtacaccatgaagaggtgtgtgcaagacat gaggacattttagcatccgatcgagtgagatttgaacaaatccgcgccgctcaccaaaacgcaaatggcaagttgatatc ctctcctagttcaaaccaatcaccagaaagcacctggccaggtgtgacgaatgggagaaccatcggatcggagagagaaa ttagcaaggtcaatcgtgttacttcaacaatcgtttctgatgttcaatcggacaacaatatcaataaattaacaacaaac gaattggtcgattttcaaggctttctggcgagacttcaattccctgaaaagttgacgactgcacaagaaaatgctcatct acttttgaccggaatgtacacagaccttttaaatacaatcaagaaacaaaacgaggaactggaaagtattcagaagcaat taaaagtagaaggagaattgcgcgatctccttgagacactcgaagaagtgaaagccagaaatgatacgaaagaggaatat gctgtcactagcaaaattatggagaaatttcaagaggttcgcaatgagtgcacaggaacccgagcagaaaaacctctagc aggtagctatgagctttgccgcaaaagacttgaagaaattcgcggtgacaggcgccgaaagcgacaagatgctaccgtga atgaagtacaaactgctgagctgttttctgacctatttggtcaacaaaacatttattcacttctccataaagatcaacaa caatcgcagttaggagttcatgatgaagatattttctttgatcaagctaaaagtttgcaaaaccaaggccagcaatttca aatgcaacagcaagtcttgacagaacagttgcacagcgcgcagaatttaccccaacaaaggcaaagagataggaatggga atataatgcctcaggccgaacaggaattggtcctagaaatacccaataatcagcaacaaacagaccatcgaattgaatca tgggactttccgccagcccaatcctccaccatctttcctttcgacttatcgctgctctcagcgccaaactctgctgcttt ccctatgtatcctccagaagagcactgatcggctgatcttactgtctatccctccaagaacaatgttggctcaaggccaa attatttaagcaatttctagcttttcttttataaactggagtggtttat |
Protein
Protein ID | aug_v2a.24126.t1 |
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Definition | - |
>aug_v2a.24126.t1 MASDEIKRRNETEKKRRDRFNSLIDELAGFICDRCKTKRSKHKCSILKITKEYFLEQEELAGQKTSQDPFGWEKPDFLAD DELCFVLQESSRAFVFAVDRESKIVYTSDSALNAVGYLPCQILQRSIYDFIHLQYHFIFQGLLSNFLISSVGDTKVSQRF EPFLCYFCRGPYAQEKGFEAVICQGTIFKNSQADEGQTLEDSHYILVLAKPLNRVSTNTTLVCSDGPQTKFTARICVVGK YEYLDKRVVSVLGFFPSELIGNSFFDYCHPEDLENLAEYCEILLMTGRLATCYYRQLTKAQSWIWLRSLFDLSYSDWSSK PQAITCLSWVVHHEEVCARHEDILASDRVRFEQIRAAHQNANGKLISSPSSNQSPESTWPGVTNGRTIGSEREISKVNRV TSTIVSDVQSDNNINKLTTNELVDFQGFLARLQFPEKLTTAQENAHLLLTGMYTDLLNTIKKQNEELESIQKQLKVEGEL RDLLETLEEVKARNDTKEEYAVTSKIMEKFQEVRNECTGTRAEKPLAGSYELCRKRLEEIRGDRRRKRQDATVNEVQTAE LFSDLFGQQNIYSLLHKDQQQSQLGVHDEDIFFDQAKSLQNQGQQFQMQQQVLTEQLHSAQNLPQQRQRDRNGNIMPQAE QELVLEIPNNQQQTDHRIESWDFPPAQSSTIFPFDLSLLSAPNSAAFPMYPPEEH* |