Gene
Gene Model ID | aug_v2a.24514 |
---|---|
Locus | scaf18399 : 9419 ... 20466 : - |
To GenomeBrowser | scaf18399:9419..20466 |
Genes list of scaffold | scaf18399 |
Manual annotation
Study field | Flagellum |
---|---|
Gene name | Adi-DHC-f29 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See chlamydomonas DHC-alpha (AAA57316) and DHC-gamma (AAA50455). This is probably a fragmented gene model. This gene model has AAA7 and AAA8 domains. EST_assem_6155 is corresponding to this genome region and has AAA7, AAA8, MT, AAA9 and Dynein_Heavy domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.24514.t1 | gi|667270741|ref|XP_008570797.1| | PREDICTED: dynein heavy chain 1, axonemal [Galeopterus variegatus] | 0.0 |
aug_v2a.24514.t1 | gi|620981800|ref|XP_007655380.1| | PREDICTED: dynein heavy chain 1, axonemal-like, partial [Ornithorhynchus anatinus] | 0.0 |
aug_v2a.24514.t1 | gi|166796749|gb|AAI59124.1| | dnah1 protein [Xenopus (Silurana) tropicalis] | 0.0 |
aug_v2a.24514.t1 | gi|597782156|ref|XP_007254627.1| | PREDICTED: dynein heavy chain 1, axonemal-like [Astyanax mexicanus] | 0.0 |
Transcript
Transcript ID | aug_v2a.24514.t1 |
---|---|
Definition | - |
>aug_v2a.24514.t1 gcgtaaaggtgtatttggccctcctttgggaaaacactttgttttctttgttgatgatctcaacatgcccgctttggaag tgtacggcgcgcagccaccaatagaaatccttcgacagtattgtgaccacaagggatggtacgacagaaaggcgataggt aggttttcaaataaaattttgaatagcttccccagtcgttgacaagagcgtttagtttatgttttnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcagt ccgagaaggactgttgcttgcgactgacgtctcgacaacctgtgcggaagccattttcagaatcaagcgatttgattggt caatagatagagtagccgttggtaaatgcgtgatgtgattggccttgaagacgtgtgcgtagataagttatccaaatagg gttgtaagatgaataataaacaatgtgttactgtctcccgttgagtaatcacagggcaaatatcgacgcaaatgggagtt cttgcgtgatacatgtccagcggttttgcaccacgtgacgtaaagtagccaatgaaatcacgcgaaaattaatgaagggt tataataaaggatctccgccgtccgatttgatattttgacggaagataagccaagaaacgagctaatgttcaagctaatt aaactcttaattggtcacggaaaacaaaacaataccgttttgtagaagatagagacggagaagttaaaaggctaggtgat aatcccgcaccaagaaacacgaaaaaatccacaaaaatatacatggaaggtctaaatgcgttcgccttgagaaattaatc agagggttagagttacgtttggattgttgaatattgctattgtgttcaaaggtgttctcatttgtacttggttttcgtgt tctcatttgtaccttttggttttcttgttgcagcttcttacgttggtgaggacaaagagacactctgtgacagcctagtt gggaatactatcgctgtttataacacggtcataactcaggtactgaaccgttaattgccattaccacacttttcagacga aagacgaaacttattgagccatagtagtattaccccttatctttgactcggtctgaaaagctcgaatactgttccgtttg ttgacggagatcatagtcaagactgatcatggagggtttcatcttctcctattgtaggctattggccttgcatggattct tgtctctgcttactttcttcatcgtccttgttaatgtttttttcttaaaacgtttattaaccgaggaaaatctagatttc ggttagctctttattcgagtcctaaactaaagaattgctctgttagaagctcaagaaagctaagttgtcggcgtcgcaat cagaagtgcaaaaaaccaaccaagaacagtatcagttctcaccaaacaatcgcacgcaatggcacttctttcgagttaaa tcccgttcaggtctgagatgattatgtcacccttttgctatactccatatttcgaatatatgactttcccgtatatttta cattggtctcatgtttgctttgcagctgctaccaacaccagctaaaagccactacacgttcaacctgcgtgatttgtcca aagttttccaaggcattctcatggctgaagcacagaaactcagtgatctgagtgatgtcttacgactgtggtaccatgaa aactgtcgggttttccaggaccggctggtcaacgacgaagacagaaaatggttcgtggacttgatcagggacaagatggc gtctggatttgagattgccatgggggatgtggtgaaagattccaccatgatctacggtgactttatggttccaagcgccg agaataaagtctacaatgaagtagccgaatttaataaggtaaactttgaagtagtcgttacaacacttttcaaggctgga cctgtcgtctcggtaggccagtcaatacgtagtgggctgaaatgaattttttgattcttcgtgtcaatgttgagcgataa tcgcagctctattttgataccttttttttagggcaattcttgattctgactttcccaaaatttttttccgaataatccca aaatcgcttggtcagccgacaagacagaggaattgcctgtgtaccaaccacaataagtgtaacctttatttgaaagaaat tgctgtcagtttttggctttggttttgttttgcatggttggttcgttttatgttgccagaacattcgtgaaagagcaatt tgacggtggtgactggccattgtatttggctttcaattacagacaaaagaaattcttctcccctcctcgtcttcctcctt tttcttctttttcttgttcttctttgtcttcttcgttttgttcttcctcttcactttactttcttctttccttcacagat ggtgaagatcatggaggaatatctggatgattacaatcagatcaacactgcgcagatgaagcttgttctcttcggtgacg ctgtccgtcacgtggcacgtataagccgtgtgattcgtcagccgcttggtaacgctctcttgctaggtgtaggtggaagt ggacgccaaagtcttacaagactggctgctcacatgtaagtatgttgttctgtttcgtggttttacaattaggtcatgct ttgggatgctttgtttacaggaagtctgcacaacggaaatgtacccgtcactttaggcgcagcgaatgcagcgactgtcg ccgtagcttatcaactgagtcttttttttttggctggaaaacgtgtcttatccacactgcagccaatgacaggatgaaag gatgagacctattttcccggctccgatgaaacagtttcgaactgatgcagcctgtcagtgatttcttgttttccaatttg atattattttagggcggagtacgaatgcttccaaattgagctggcaaagaactacggtgtacctgaatggcgtgaagatc taaagaagatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnncactctaacaaatatgttacaaaaaatatggatgnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnngggtgattgtgcacctatcagtcgagctgccattcgttttcggctgatgattatataaacttg tatttctatataccttgtctgtcggtttttcttctcaggttagcatttgcggtgttattcaccagtcggtgtccctgaaa tcaaagcaatacctggctgaattgtcgcgacacaattacgtcactcccacaaggtacagggaagaataactttctttttc tccgccagtccggtggaggggagacataaattgtgagtgtagacttagattattctcatctttaattgattacttctttt ctttagctacctagagctactgggcaccttccgaaagttggttggtttgaagaaatcagagctttcatccgccaggaaca ggacaaaagtgggcttggacaaggtaaaaacattcattatcggaatggagatacgtttactcttcttctaatagtttact tgagatattccgagttgtctataaagcatggaattcatgcactctggctctagtcagtttgccacaaaacagttaaaaca gcgatgtcatttcccagactgataagttctttttactcaatatatttttctcagtatcttaagggtttcaagcgtggaat tcagttcacgaaaatagtcagttgccttgcaggtatatgatgttcttagacatgaatcgttatctcctaacattgcccta ttgtcttgtcgtttattctggccacagttgcttagcacggcagatgaagtggaaaagttgcaagaagaactggagaccat gcagcctttgttagctcaggcagccgaagaaactgtagagacaatggagaaaatcaaagtggactcggtaggaacgaact tttcttctctatctaaaattcgaattcataaaacactttttaattcaagttccatgcttctatgttcacatgtaatttga caaatgatcgttacttcttgattcttcttcttgatggtatgttacttcttaaaatgccatcccccgtcccttcaaccatg ttagaaaaaaacgaaatatgctgttgtttctgcgacttgatattttacttcaccggaagcaaatacattctatcgtaagt agccgacttgatacgttacgttgtcagtaaacgctctggcctttgtaccacactggttcctgttaatcagagcctagaca gttgtatcctttgtacagatatagtttaaagagtcttcgtccggatgaagttatcgcgacgttcattttcgaattttcac ttcagcttctatttcaaagcgagtctgagcctgcgaaacctttgtactgaacatcagtttgcactcattttttaaaatag aactaattaccataacaaatttcgcgccaagactcgctttgaaaacgagactgaggggaactcggaaatggtctatcatc aggggttcctggtgtaatatcaataatatacttattgatgttgtgttaggttgttgccaatgaaaccaaagtcgttgtgc aacgagaggaagaggaagccggaaagaaggctgcagagacccaagccattgctgatgatgcgcagagggacttggacgag gcccttccagcactggtaagtactaattggaataaggagcgatttgttcaaacgtttaactataaaatgccgcgatagaa tgatattggtttaaagcgtttgaaagagagggttgagacgttaaaagagggacgacttcttgactttgaactaacgtcat ttttaagaaaaaaatgtggggctgatagaaatgttcgctcaacgcggaaacgtcgtcggttttttcggtgttttaaccct ttttataatgtcttctgccgcagtatttcatagttgaatgcttggtgaaaaactttaaatgattcatcacggatggagtg aatcggtgcatggactggaagcagggattctccttttaaaatggatttcggaacggggttattcataatctttgtccgtc gaattggtttgttttcatatctgttgtttcctagatgatgatatcaaagatttcgcgttctctcaagtaactgcactagc ccatagaaaatgcagtttgactcatgctggattcatttagatcctaatctattattctttgggttaatcagctgcagtgc tttgaatccagcctgagctttagaatatttaattactactgtccagatgaagtccttgatcttattcactcgccaatttg tcaacaggaagctgctttagcgagtctcaagtccctgaacaaaacggatgtcgttgaggtaaaaagaaagaaccgtttaa tcattccatcagcaactgtttatgtactccttcccagtacttgtcggaaaagtctcagccttgtcatttgaacagttggc taaacatgcaacggagaaactagcacgcgcggcgatactttggccgtgattatgatttgaacgtaaccttttgttctaca atatagatcttttacactgccccaacatgtgcttcgtttttccattcttggcaggctcgatgttaatttttgttattgtg ttattgtgcttacggagtttgtgtgagaagcacagttgcgttactgttcgctttggttgtaggttcgtgctctacagcgc ccaccacctggtgtgaagcttgtgatcgaggctgttagcatcatgaaaggcgtcaaggcaaagaaagtggcaggagagaa ggtaaaataaagtttgcaataatttcaatctggcatcggaatcgttgcggttttgtcacatccaccctgttaatcgtcta aagcttaactgactctgcgtgaaaagtggcgagtcacttctagctacaatcatggacaaacgttgtcgagacgcatgaaa attactagcgtctctccttggtgtaaattctgctctttttttttcaatgatggaaacaacttaacatccacgaagcgttt tgcaacattgttttgggggggggggaggtggtgaccgatgaaaaagatgttttcattcaaatgcaatgttctgttgttag ttcgaaagcgtttatcttggtaaattgtctcaacacctttgtccatgattgtaggttaccatggccagagagagaactgg tacgcaaaacggtttcagttttgtcgaagaaaaaaaaaagatgggtcatcgcttcgatcttcagtctcgcaactcttcaa aaatgttggtttttcattcaacgcgtcgtcaagatcgaaagctatgacatttgattcttcgcgttcactttgagatccgc ttggtttatttgattattttcgtctcttttgatttgccccagaaattgttttaatttaatttgactgagttacaagaaat ccggatattgataacttaaagatgctgtgtcaacttgcattcttcattgggctgaaaagatagttaacctgacttgttta atgcggaaaacgttttctttgtggacattttgagtaggttggcacgaaggtagatgactactgggaacctggcaaagctc ttctgcaggatcctggaaaattcttggaaggtcttttcaagtatgacaaggtaaaatttcctctgtcctccgctgcgaaa taatccattccattcagattttgtgctgaagtgttttctttgtatcaacacaggacaatattcctgatacagtaattcag aaaatccaaccttacattgaaaatgaagactttcagccagctgcgatcgccaaggtaagaggggcgcttagacctcacgg gacaattgacgatgtttctcaaactccagggtgcatccagttacttgcaatcttgaaaaatcttaagtgcaacaatcatg gctggataagaactactgcaagttgatatttgacactccagagcggcagtttcgcccaaatttccaaacgaagtatatat tgaagattctgagcaaaatattctgattgcgccaagacaagtcaagtgggaggatacctcacttcttgttgccgccagtc ccttaaatgtgaaaatgctcttacttagtctttttttttttgcgaagtttatgtgcatttgtcaatcagtgagcgcgctt tatgttcgacgcgacgtgacattgcgtcacaattggcgcgcgctacaaggagcagcaaaaaacaagcagagctagaatca gcgcgacctcatcttactttttgtgccatcaggtttccaaagcttgtacttccatttgtcagtgggtgagagctatgcac aagtatcactttgtggccaaagcagtggctcctaaacgggtaaatgtagtgtttcaacatgtattgaagcactgagttct atttgtcttagtccctagtatacttgttgcagaatatttgtccacgcgaggtgaaagaaagtctggtttgcttgagatct gatgttgatttctcatcttagaccatttatgttttgtgcagagcttcatatgagaatgtattttccgaagtataattaaa ctgatactttaagatttttctttccgcaaggaagagagtggagttaagattttattcctctttttggcgtttatgtgtaa gtgctaaagtaagttttgagtgatggttttcagtccgagtttcttttattgccttatgtaggctgctctcaaacaagcta cagaagaattgcaagagacccagcgagttcttgcggaggcgaaagctcggttagccgacgtagaggaaggcatagcctca ctccaagccaaatacgaggagtgcatttctaagaaacaagagttagaatttaagacagagcagtgctcagccaggcttgg cagagctgaaaaggtcggtgcagaaaatattgataagcgacaagtcctgtttattagttgtttaaaaaagagttctgtta ctaaatgaaaaaaaaatggaaatcgaaattggcatcaagtttttgcaatttgtgactgctctaagtcttgaaccaggtgg cttcatttgaaaactattatcgcattcagtttgccattacctttatgtagaaagactagttgcttttccatcagatatta ggagaaactaattgatcctgtatctgtttgttgatatgtaactaaagagaattgaagttgcgttgtcacttttgaaaatt cgttttggaaattttggacggcctttttacacttttccaattgttgccaatctcctgacgaggcacgcaaaagcactgat gcgtctcttcatgacaactgaaatttcaggaattttttttttgcaagaaagactcgctcaaaatgttccacttccttttc gtcttgtagttgattggtggactaagtgacgagaaggtccgctggcacgaatcagtcctggagtttgatgctcagattgt caatatcgttggtgacgttatgatttcgtcaggagtcatcgcttatcttggaactttcacggtgagtttttcccctgttt tgtcataaccgcgaaaatgtgcacgatagacctaatcggctaactcagtgttgtacccaattcaaatctcccggggttaa gattctttgtgtgttgcatttgcattagaatgtggcattcacatttaaacgatatggaaattcctgaaacaaaacatttt attcgcaaagggtttgaattgggtacccaattgggtctattaggcttttagttcgacccgtaaacgaaaccttcatgtaa tcgtgttcaagtgttaccactggagagttcttgttatctcagcctgggagttttcgaacatttttggcctttcttcttat ctccagtagcacacacaatagtagaacatccaaaccggttatcgaaagttcgaccttgtgaggtataaaataaaaataaa aacaccca |
Protein
Protein ID | aug_v2a.24514.t1 |
---|---|
Definition | - |
>aug_v2a.24514.t1 RKGVFGPPLGKHFVFFVDDLNMPALEVYGAQPPIEILRQYCDHKGWYDRKAIASYVGEDKETLCDSLVGNTIAVYNTVIT QLLPTPAKSHYTFNLRDLSKVFQGILMAEAQKLSDLSDVLRLWYHENCRVFQDRLVNDEDRKWFVDLIRDKMASGFEIAM GDVVKDSTMIYGDFMVPSAENKVYNEVAEFNKMVKIMEEYLDDYNQINTAQMKLVLFGDAVRHVARISRVIRQPLGNALL LGVGGSGRQSLTRLAAHMAEYECFQIELAKNYGVPEWR* |