Genome browser
OIST Marine Genomics Unit since 2008
Photoreceptors / Circadian: Total 27 genes are annotated
Gene model
Gene name
Description
Blast top hit
Blast2GO annotation
Scaffold
aug_v2a.08869
Adi-ARNT
gi|156373864|ref|XP_0016295...
predicted protein [Nematost...
aryl hydrocarbon receptor nuclear translocator
scaf3381
aug_v2a.21671
Adi-bmal/cycle
gi|156359347|ref|XP_0016247...
predicted protein [Nematost...
aryl hydrocarbon receptor nuclear translocator-like protein 1
scaf14286
aug_v2a.20767
Adi-ck1 alpha-1
gi|156399594|ref|XP_0016385...
predicted protein [Nematost...
casein kinase i isoform alpha isoform x3
scaf13103
aug_v2a.18113
Adi-ck1 alpha-2
gi|147905704|ref|NP_0010805...
casein kinase 1, alpha 1 [X...
casein kinase i isoform alpha isoform x4
scaf9608
aug_v2a.11803
Adi-ck2alpha
gi|642911565|ref|XP_0081994...
casein kinase II subunit a...
casein kinase ii subunit alpha isoform x2
scaf4639
aug_v2a.08513
Adi-CREB/ATF
gi|156385047|ref|XP_0016334...
predicted protein [Nematost...
camp-responsive element modulator isoform x1
scaf3241
aug_v2a.02780
Adi-Cry1
gi|551500798|ref|XP_0058019...
cryptochrome-1-like [Xipho...
cryptochrome-1-like
scaf937
aug_v2a.16791
Adi-Cry2
gi|685526789|ref|XP_0091997...
neprilysin [Papio anubis]
endothelin-converting enzyme
scaf8033
aug_v2a.16488
Adi-Cry4
gi|742142383|ref|XP_0108792...
cryptochrome-1-like [Esox ...
cryptochrome 3
scaf7750
aug_v2a.14798
Adi-DASH
gi|156372263|ref|XP_0016289...
predicted protein [Nematost...
–
scaf6234
aug_v2a.18753
Adi-dco
gi|156365823|ref|XP_0016268...
predicted protein [Nematost...
casein kinase i isoform epsilon
scaf10596
aug_v2a.13302
Adi-grin1
gi|156368325|ref|XP_0016276...
predicted protein [Nematost...
n-methyl-d-aspartate receptor subunit nr1-3a
scaf5392
aug_v2a.23327
Adi-nr1d1-1
–
–
protein
scaf16654
aug_v2a.11217
Adi-nr1d1-2
gi|156395075|ref|XP_0016369...
predicted protein [Nematost...
estrogen receptor isoform x1
scaf4329
aug_v2a.09658
Adi-nr1d1-3
gi|156376476|ref|XP_0016303...
predicted protein [Nematost...
nuclear receptor subfamily 2 group e member 1
scaf3696
aug_v2a.10255
Adi-nr1d1-4
gi|156374224|ref|XP_0016297...
predicted protein [Nematost...
nuclear receptor subfamily 2 group f member 1-a isoform x4
scaf3932
aug_v2a.10255
Adi-nr1d1-5
gi|156374224|ref|XP_0016297...
predicted protein [Nematost...
nuclear receptor subfamily 2 group f member 1-a isoform x4
scaf3932
aug_v2a.04233
Adi-nr1d1-6
gi|156380981|ref|XP_0016320...
predicted protein [Nematost...
2 nuclear receptor
scaf1544
aug_v2a.21535
Adi-nr1d1-7
gi|156390845|ref|XP_0016354...
predicted protein [Nematost...
cadmium zinc-transporting atpase hma2-like
scaf14130
aug_v2a.19625
Adi-opsin-10
gi|156366198|ref|XP_0016270...
predicted protein [Nematost...
protein
scaf11689
aug_v2a.10282
Adi-opsin-2
gi|156363565|ref|XP_0016261...
predicted protein [Nematost...
melanopsin-a-like isoform x2
scaf3940
aug_v2a.01085
Adi-opsin-4
gi|585645901|ref|XP_0068822...
15-hydroxyprostaglandin de...
15-hydroxyprostaglandin dehydrogenase
scaf433
aug_v2a.00529
Adi-opsin-9
–
–
–
scaf241
aug_v2a.07426
Adi-pdp1-like
gi|390336256|ref|XP_785252.3|
hyaluronan mediated motili...
–
scaf2784
aug_v2a.11535
Adi-sgg/zw3
gi|156370351|ref|XP_0016284...
predicted protein [Nematost...
glycogen synthase kinase-3 beta isoform x2
scaf4501
aug_v2a.07489
Adi-slmb
gi|156405527|ref|XP_0016407...
predicted protein [Nematost...
f-box wd repeat-containing protein 1a
scaf2807
aug_v2a.09078
Adi-timeout
gi|617500026|ref|XP_0075407...
protein timeless homolog [...
–
scaf3474
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