Gene
| Gene Model ID | habu1_s104_g00535 |
|---|---|
| Locus | habu1_scaffold104 : 172161 ... 181715 : - |
| To GenomeBrowser | habu1_scaffold104:172161..181715 |
| Genes list of scaffold | habu1_scaffold104 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cerebellar degeneration-related protein 2 | GO:0005737 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s104_g00535.t1 | gi|602675653|ref|XP_007443303.1| | PREDICTED: cerebellar degeneration-related protein 2, partial [Python bivittatus] | 0.0 |
| habu1_s104_g00535.t1 | gi|327289119|ref|XP_003229272.1| | PREDICTED: cerebellar degeneration-related protein 2 [Anolis carolinensis] | 0.0 |
| habu1_s104_g00535.t1 | gi|564269942|ref|XP_006273738.1| | PREDICTED: cerebellar degeneration-related protein 2 [Alligator mississippiensis] | 0.0 |
| habu1_s104_g00535.t1 | gi|641799861|ref|XP_008162859.1| | PREDICTED: cerebellar degeneration-related protein 2 [Chrysemys picta bellii] | 0.0 |
| habu1_s104_g00535.t1 | gi|558115117|ref|XP_006112860.1| | PREDICTED: LOW QUALITY PROTEIN: cerebellar degeneration-related protein 2 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.3 |
| Venom grand-1 | 2.5 |
| Pit, infrared sensing | 4.3 |
| Nose | 5.4 |
| Brain-1 | 1.2 |
| Eye | 18.7 |
| fetal fibroblast | 5.9 |
| venom gland-2 | 9.0 |
| Brain-2 | 2.0 |
| Spleen | 0.6 |
| Lung | 1.0 |
| Liver | 0.4 |
| Kidney | 0.4 |
| Pancreas | 0.2 |
| Small intestine | 1.5 |
| Large intestine | 0.7 |
| Stomach | 1.8 |
| heart | 1.4 |
| ovary | 147.5 |
| cheek muscle | 1.3 |
Transcript
| Transcript ID | habu1_s104_g00535.t1 |
|---|---|
| Definition | - |
>habu1_s104_g00535.t1 gctcgggggcggctttaaaggcggcgcgcagcccggcgcccgcagggacggtgagtggcggcagcggcggcggtgcgatg ctcaccgacagtctggtggaggagttcgagatccgcgaggatgagccgtggtacgaccagcaggacctgcagcaagatct tcatctggctgctgaactggggaagacccttttggaccgaaacacggaattagaatcctctctgcaacagatgtactcca ccaaccaggagcaactgcaggaaatagagtatctcaccaagcaggtggaccttctccgtcaaatgaacgatcagcacgcc aaggtctacgaacagctggacatcacggctcgagatctagaagatgccaatcaaaaactgatttctgacagcagagcctc ccagcaaaagataggaagcctcacggaaaccattgataacctccagactcacattgatgaactgcagaggcaggtggaag agttgaagacctccgggcaaagccacgtaaattacgaaagacctgagcagcccaagtcggtccagagttttccatgcctg aaagaactgtatgatctccgcaagtatttcgtctatgaccatatatttgccgaaaagattatatcaatggatagtcaact aagtcccgctgaagaggaaaaccagaatttgaagaaggccgtaactctcttacaaactcaactcaacttggagaaggaaa aaaggttttctatggaggaagagtacagttttctgctgaaggaaaacacggatctggagcaacggctggtggacaaccat ctctaccaggccagagtggaggaactggagatagaagtggctgaaatgaagcagctctttcattctgggaacccttgtcc gaacgggatggagcaactgcccccggagtcttttttcgtttctctcaaagaccccttagaaagagaactcagccagggtc cttgggacgggatgtccttcatccttcctgaacttgagaaacggtccctcaaaagaagcagcagcgagggctggctcagc ggcggcacggcaggcgaggacctcttcaaaggccacgaagagacctgcatcaggagggcggaagccgtgaagcaacgggg cgtttccctactcaacgaggttgacgcccagtacaacgctttgaaggtcaagtatgaagagctgctgcagaagtgtcaaa cggacaaagaactgctggaccacaaggctgtgcagacctcaaaacagcgtcccaaggatgtccatggtgggagagtaccc ctggaggagggtcttagggagcccggttccccgactgccgattcagccaacttttcttccagtgcttcccctgaatataa acttctcttcaaggaaatctttaatcgcattgaggaaactagaaaggaaattgatgaacatcgggcaaaatataagcctt tctcttctcaatgtccttaaaaagtatgggtacgatggtgggggttgaaaaatatattttttttttcatgatgcaaccaa cccttctaatattccttagggaatgcaacttggctcaaggtcggcagattttctgtaaaatgggttggatccttttgatt cggtctacagagtcgggatccggttgattccatctcgccctgaaccaagtttccccctggagggcgagtccctggcaacc aatttgcaaattaatttgattgcacaactcttattaaccgtcctcgttctgttgaaaaagtttgatgcgttgtagaaaca agaaccacagagaagattgtatcatagaatgacagctctcctgagcttaacccattcttcctaggttggaataaaccaaa atgtagatgatttttgc |
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Protein
| Protein ID | habu1_s104_g00535.t1 |
|---|---|
| Definition | - |
>habu1_s104_g00535.t1 MLTDSLVEEFEIREDEPWYDQQDLQQDLHLAAELGKTLLDRNTELESSLQQMYSTNQEQLQEIEYLTKQVDLLRQMNDQH AKVYEQLDITARDLEDANQKLISDSRASQQKIGSLTETIDNLQTHIDELQRQVEELKTSGQSHVNYERPEQPKSVQSFPC LKELYDLRKYFVYDHIFAEKIISMDSQLSPAEEENQNLKKAVTLLQTQLNLEKEKRFSMEEEYSFLLKENTDLEQRLVDN HLYQARVEELEIEVAEMKQLFHSGNPCPNGMEQLPPESFFVSLKDPLERELSQGPWDGMSFILPELEKRSLKRSSSEGWL SGGTAGEDLFKGHEETCIRRAEAVKQRGVSLLNEVDAQYNALKVKYEELLQKCQTDKELLDHKAVQTSKQRPKDVHGGRV PLEEGLREPGSPTADSANFSSSASPEYKLLFKEIFNRIEETRKEIDEHRAKYKPFSSQCP |
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