Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s104_g00537
Locus habu1_scaffold104 : 198896 ... 202410 : +
To GenomeBrowser habu1_scaffold104:198896..202410
Genes list of scaffold habu1_scaffold104

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s104_g00537.t1 1 1 DREV 1 192 0.0 324.5 0.0 0.0 324.3
habu1_s104_g00537.t1 1 1 Methyltransf_23 18 163 9.9e-11 41.6 6.8e-14 1.3e-10 41.2
habu1_s104_g00537.t1 1 1 Methyltransf_12 25 106 2.0e-08 34.6 1.7e-11 3.1e-08 33.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s104_g00537.t1 gi|602672822|ref|XP_007441912.1| PREDICTED: methyltransferase-like protein 9 isoform X1 [Python bivittatus] 0.0
habu1_s104_g00537.t1 gi|602672824|ref|XP_007441913.1| PREDICTED: methyltransferase-like protein 9 isoform X2 [Python bivittatus] 0.0
habu1_s104_g00537.t1 gi|637355203|ref|XP_008119084.1| PREDICTED: methyltransferase-like protein 9 [Anolis carolinensis] 0.0
habu1_s104_g00537.t1 gi|591371763|ref|XP_007060692.1| PREDICTED: methyltransferase-like protein 9 isoform X2 [Chelonia mydas] 0.0
habu1_s104_g00537.t1 gi|558115142|ref|XP_006112866.1| PREDICTED: methyltransferase-like protein 9 isoform X3 [Pelodiscus sinensis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 22.1
Venom grand-1 77.4
Pit, infrared sensing 18.5
Nose 23.4
Brain-1 8.1
Eye 12.4
fetal fibroblast 48.5
venom gland-2 184.8
Brain-2 9.1
Spleen 18.9
Lung 13.6
Liver 22.2
Kidney 14.8
Pancreas 33.0
Small intestine 12.6
Large intestine 17.5
Stomach 18.6
heart 9.6
ovary 45.1
cheek muscle 22.6

Transcript
Transcript IDhabu1_s104_g00537.t1
Definition-
>habu1_s104_g00537.t1
ccccttccaaaataaactcacctctccccatctttgacctttcagcttgctggaaagaggttccatgtttgtgttttcac
ctgaacaatttcagagactgctcaaaatcagcccagactggaagtcgcgtcggcttctcgatttaggagccggagatggt
gaagtcaccaaagtcatgagtccccactttgaagaaacgtacgtgaccgagttgtctgagaccatgatttggcagcttca
aaagaagaaatacagggtgcttggcatcaatgaatggcagaatacgggattccagtatgacgtcatcagttgcttgaact
tgctggatcgctgcgaccagccactgacggtcttaaaagatatcaggagcgtgctggaaccgacgagaggccgagtcatc
ctggcactagttttgccttttcatccctatgtggaaaatgtaggtggcaagtgggataaaccctctgaaattttggacat
caaaggacagacgtgggaggagcaggtgaacagcttgccggaggttctcaagaaagccggcttcgccattgaagccttca
ccagactaccctacttgtgtgaaggcgacatgtacaacgactattacgtcctggacgacgcggtcttcatcctcagaccc
atctgaatcgggtcctggggaatccggtcggaagccaccagcaaacggaaacgtttcgattcttcgtctgggtttgggtt
cttgttgatttgggtggttttcgttttgaatttatgatcccttcccggcagaggaaggggttttttttgtggttgtctaa
tctccgtggacttcttgaactgaaaatggaaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtt
tttaatcacgctaataaaacttttttttttcgaggtggtg

Protein
Protein IDhabu1_s104_g00537.t1
Definition-
>habu1_s104_g00537.t1
MFVFSPEQFQRLLKISPDWKSRRLLDLGAGDGEVTKVMSPHFEETYVTELSETMIWQLQKKKYRVLGINEWQNTGFQYDV
ISCLNLLDRCDQPLTVLKDIRSVLEPTRGRVILALVLPFHPYVENVGGKWDKPSEILDIKGQTWEEQVNSLPEVLKKAGF
AIEAFTRLPYLCEGDMYNDYYVLDDAVFILRPI

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