Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s10520_g20092
Locus habu1_scaffold10520 : 65954 ... 80685 : -
To GenomeBrowser habu1_scaffold10520:65954..80685
Genes list of scaffold habu1_scaffold10520

Annotation by Blast2GO
Annotation GO
dual specificity tyrosine-phosphorylation-regulated kinase 3 isoform x2 EC:2.7.11.0 GO:0000287 GO:0004674 GO:0005524 GO:0005634 GO:0006468 GO:0009069 GO:0030218

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s10520_g20092.t1 1 1 Pkinase 198 512 0.0 204.9 0.0 0.0 204.4
habu1_s10520_g20092.t1 1 1 Pkinase_Tyr 200 394 5.8e-22 78.0 8.0e-25 1.7e-21 76.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s10520_g20092.t1 gi|602668187|ref|XP_007439644.1| PREDICTED: dual specificity tyrosine-phosphorylation-regulated kinase 3 isoform X2 [Python bivittatus] 0.0
habu1_s10520_g20092.t1 gi|602668185|ref|XP_007439643.1| PREDICTED: dual specificity tyrosine-phosphorylation-regulated kinase 3 isoform X1 [Python bivittatus] 0.0
habu1_s10520_g20092.t1 gi|637326870|ref|XP_003224072.2| PREDICTED: dual specificity tyrosine-phosphorylation-regulated kinase 3 isoform X2 [Anolis carolinensis] 0.0
habu1_s10520_g20092.t1 gi|637326866|ref|XP_008113870.1| PREDICTED: dual specificity tyrosine-phosphorylation-regulated kinase 3 isoform X1 [Anolis carolinensis] 0.0
habu1_s10520_g20092.t1 gi|530639427|ref|XP_005306506.1| PREDICTED: dual specificity tyrosine-phosphorylation-regulated kinase 3 isoform X3 [Chrysemys picta bellii] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 3.3
Venom grand-1 2.4
Pit, infrared sensing 3.4
Nose 5.0
Brain-1 2.9
Eye 4.1
fetal fibroblast 9.5
venom gland-2 1.5
Brain-2 2.9
Spleen 2.3
Lung 2.9
Liver 1.0
Kidney 1.6
Pancreas 1.9
Small intestine 3.9
Large intestine 2.1
Stomach 1.8
heart 8.6
ovary 2.7
cheek muscle 1.7

Transcript
Transcript IDhabu1_s10520_g20092.t1
Definition-
>habu1_s10520_g20092.t1
gggttttttcccgggtatcctgagcgctatgatgctgctgagcaggaagtcggaaggtcccctctcggcagccaggtttg
gagatggcttgtatgactcttatatgagaatagatcagattagatatccagaacctacaaatgaagaatgcaccccttct
ggttttccttcactagggagatctaatgtaactactagcataatcacaatgaaggatcatcctttgactgggagccaagt
caaagttgagcaattatttgaagactctggaaatagaaggagcagtactctgcagtcctctggaataaatggctctgaaa
ggtcatttccaactccagtaaaagataaaagcggtgatagtatatgcaccgtcaaaaatagtggcagctcaataaaagca
cagaaagctggatgtcagtctgcagagcaagcactgaagcaatataaacagcagttaacagcctatgagcaacaagaaat
atttaattttcctgaaatctattttgtgggtccaaatgcaaagaaaagacagggagttattagtggcccaaacaatggtg
gatatgatgatgaacaaggcagctacgttcatgtgcctcatgaccatcttgcgtacagatatgaagtgcttaagataatt
gggaaaggcagctttggccaagtagctaaagtgtttgatcacaaacaacaccaacatttggctctaaagatggtgcgcaa
tgagaaacggtttcaccggcaagcggcagaagaaatacgcatcttggaacatctcaaaaagcaagataaaactggcagca
tgaatgttattcacatgctagaaagctttacctttcgaaatcatatatgtatgacttttgagctcctgagcatgaatttg
tatgagctgatcaaaagaaacaagtttcaaggcttcagtgtgcagcttgtacgtaaatttgcccactcaatattgcaatg
tctggaggggcttttcagaaacaaaattatacattgtgacttaaaacctgaaaatattcttctgaaacagcaagggcgga
gtggaatcaaagtaattgattttggatctagttgttttgagcaccaaagagtttacacttacatacaatctcggttttac
agagccccagaagttatcctgggaagccgctatgggatgcccatagatatgtggagttttggctgtattctggtggaact
tctgactggttatcctttgtttccaggagaggatgagggtgatcagctagcttgtatgatggagctccttggaatgcctc
cacagaaattgctagaccaatccaagcgagccaaaaacttcatcaattcgaaaggtcatcctcgctattgcagtgtaaca
acaactcaagcagatgggaaagttattcttaatggtagcagatcacgaaggggtaaaatgcgcagtgctccaggcaacaa
ggactggattacagcattaaaaggctgtgatgactctttgtttatagagttcttaaaagaatgtcttaattgggatcctt
ctgcaaggatgactcctagccaagctttaagacatccttggatttgtaaacgagtacctaagcctcccagcgtggataaa
agttcaggcaaacggattgctcactatacaagcgctttcccagggataaattccagattacccccagttgttggggtagc
aaacaaactgagagctaatctaatgtctgattcaaatgccaatatacctctatgtactgtgctaccaaaattggtcagct
aatagagaattacatactcccagggtatatactgtgtttattattatctccttgaaccacaaagagattagtgtagggcc
tggggaaaagattattgaaggttgaatcttgtataaaaaaacctgaatgaaaacaagcattttaagggctataattattt
aatcaaatagtttcagctagaatgggatgcttattgtatacatttgttttattcagtgagatcacatgctgtataacaga
tattagagtaacgttataataaaccacaaaatcactgttcatgccggcggtcatgtaaacagaaaattgagtgcaatgtg
gtttcaagataatttgcacctgatagtaaatttcttacagaatgctggtcaaaaagcacaagttcttaagctttttgttg
tctatgaattattttgtagtaatttctacatataattgcaagatttctgagtttgcaaaattaatttgcgaactctcctt
caaattgtttgcagacaagcaccttgcaaaagtgtgtggtgagccagacctatgaagataatagtttttggacactcatt
ttaatatttttaattcttcattccaacattttaaattgaattaattaatcacatggagataaaaatatttctgagaaaat
ttcttgtaagtaagttgcttttaattttagtgaaggataaactgaggaaaatgctgttttcaaatctcagatgcaaaaag
atgggtgcttcaaatattttgtacaggaaaatgtaatgggcagcatctggatattggaaaataaaattattttactagtg
cacataagtttgcctcttggttttcccattcaggatcttgattatgaagacttgatctttagcaaagcacaaaacagtat
tactcagacctaaagtacagtttaggtatatgatgcaaggttaatggatcattattaatggtagccatttgcattggata
tttaccaataagttgaagatgaactattatttaaattccattttccacattggatgcattctatattataataatttgta
gaacagctaatcactgagaaattaatttgcttcctcctgtttttgtgttaactgtgtttactctcatgagttacacaaat
actagattagatactctgtcagctgtttattcagattgcaatgcaatttctgcacatgcgtgttaatactgcataggtag
gaaaatgtgaagagtcctcaagaatagagattttatagatgctcactaacttcagaaccagaaagctctattgcacttac
atgtaaattttattccaattccaaataaatgccttaatttctctatttcacatagttgggtttttacatctgcatggcca
tttaagattatttgaaattaagaattctgtcttagcagtaataatgatcacagttcaggctttttagattgtaacattct
cgaggcaatgcaaacaaaaatatttgattgcagtagcagacattgagtgtataaagaattgcacatatccttctaaccct
aacccttggcaagacaatcttgtgcaaaatgttattttactgcataaacattttaatgtttagtgaatttgtatgccatt
ccattagttgaggaatttgggacagtttacaagaaaataaaatcatgaagtaagcaagtacaataaaacaaaatataaaa
ttgaaaacttgattttagttgcacgtttatagctcattgcatttcgttttttaattgttcaccctttgtataaaatataa
tatttttcacaaaatacttacaaactatagcgaaatgtatggggtacattatagcttgttgctttttattgctttaaata
atgctgaatcttgcaggtaaaagtcaccattaataaaatccaggtcattttgggaaataaaatatatatagtatttgatt
gaaagcttatcaaataggtttcatagtaaacaattttctctttttaattattgtctttaaacttttttaaaagggcatcc
acgttcttccattttcttgtttctttggctgaaaaagctcctctgtgataattcttgctaatatgagaataacacaaaaa
ctgattgtacatctggattaccgagacatttaccttgcctttaataggcaatttgttatggagacaaaaatcttcaaaaa
ttatttgcatcatttcaccatcttgtaacaggtgtaaaacaagatatatttctataaaagaatgatttctgaaatagttt
gggtttttaccatttctattaaagaaagttaatttagacaaggtacttttaagtgaggtaactgatatagttatggaatt
ttctgaactaaataaaatcttacagtaacattccttttctgtaaaatgtctgttaaggaaaatgcaacaacagcaaattg
gcttacttagcatttggcactggtctgtaatatcctgtatctataaatagactgggtttattggtattttatatacaaaa
ggttttctaatttgaaataatgttcatctgaattctttattttaatgtgagaactaagttaatatcttcagttctatgaa
aatactctagcccagaaatattaactgaaatgagttttcttgaaaaataaaaatatgatatagtgaattgagg

Protein
Protein IDhabu1_s10520_g20092.t1
Definition-
>habu1_s10520_g20092.t1
MMLLSRKSEGPLSAARFGDGLYDSYMRIDQIRYPEPTNEECTPSGFPSLGRSNVTTSIITMKDHPLTGSQVKVEQLFEDS
GNRRSSTLQSSGINGSERSFPTPVKDKSGDSICTVKNSGSSIKAQKAGCQSAEQALKQYKQQLTAYEQQEIFNFPEIYFV
GPNAKKRQGVISGPNNGGYDDEQGSYVHVPHDHLAYRYEVLKIIGKGSFGQVAKVFDHKQHQHLALKMVRNEKRFHRQAA
EEIRILEHLKKQDKTGSMNVIHMLESFTFRNHICMTFELLSMNLYELIKRNKFQGFSVQLVRKFAHSILQCLEGLFRNKI
IHCDLKPENILLKQQGRSGIKVIDFGSSCFEHQRVYTYIQSRFYRAPEVILGSRYGMPIDMWSFGCILVELLTGYPLFPG
EDEGDQLACMMELLGMPPQKLLDQSKRAKNFINSKGHPRYCSVTTTQADGKVILNGSRSRRGKMRSAPGNKDWITALKGC
DDSLFIEFLKECLNWDPSARMTPSQALRHPWICKRVPKPPSVDKSSGKRIAHYTSAFPGINSRLPPVVGVANKLRANLMS
DSNANIPLCTVLPKLVS

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