Gene
| Gene Model ID | habu1_s10520_g20093 |
|---|---|
| Locus | habu1_scaffold10520 : 88466 ... 112893 : + |
| To GenomeBrowser | habu1_scaffold10520:88466..112893 |
| Genes list of scaffold | habu1_scaffold10520 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eukaryotic translation initiation factor 2d | GO:0003743 GO:0005840 GO:0006446 GO:0071826 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s10520_g20093.t1 | 1 | 1 | SUI1 | 464 | 539 | 9.2e-15 | 54.2 | 5.8e-18 | 2.1e-14 | 53.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s10520_g20093.t1 | gi|602668193|ref|XP_007439647.1| | PREDICTED: eukaryotic translation initiation factor 2D [Python bivittatus] | 0.0 |
| habu1_s10520_g20093.t1 | gi|327278645|ref|XP_003224071.1| | PREDICTED: eukaryotic translation initiation factor 2D [Anolis carolinensis] | 0.0 |
| habu1_s10520_g20093.t1 | gi|564257863|ref|XP_006267879.1| | PREDICTED: eukaryotic translation initiation factor 2D [Alligator mississippiensis] | 0.0 |
| habu1_s10520_g20093.t1 | gi|591381217|ref|XP_007065146.1| | PREDICTED: eukaryotic translation initiation factor 2D isoform X1 [Chelonia mydas] | 0.0 |
| habu1_s10520_g20093.t1 | gi|530639416|ref|XP_005306501.1| | PREDICTED: eukaryotic translation initiation factor 2D [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.1 |
| Venom grand-1 | 9.3 |
| Pit, infrared sensing | 3.3 |
| Nose | 2.6 |
| Brain-1 | 1.5 |
| Eye | 2.7 |
| fetal fibroblast | 13.6 |
| venom gland-2 | 12.5 |
| Brain-2 | 2.1 |
| Spleen | 4.2 |
| Lung | 3.1 |
| Liver | 7.4 |
| Kidney | 10.2 |
| Pancreas | 7.8 |
| Small intestine | 5.3 |
| Large intestine | 4.2 |
| Stomach | 5.4 |
| heart | 7.3 |
| ovary | 16.5 |
| cheek muscle | 19.0 |
Transcript
| Transcript ID | habu1_s10520_g20093.t1 |
|---|---|
| Definition | - |
>habu1_s10520_g20093.t1 ccgattctactgcggtatctttgctgctgagatcaccagagcaggaaatagtagtcgtaccagttgtaggaataatcatg caattgccccacggactccttttgttgcagtaccgcactatggctgcgcccatgtaacgaagagagatttctatgcagat ctttacagacaatcaatgggtcccactttctaaagtatttcccctatttctggggaatccacgatcggcggaattccaag ttctcccagaatcggagtcttgggatttttttaaaatatgtttgtcaaacctttcagggtgaaatccaacaccgctatca aagggtccgataggaggaaattgcgaaatgatgttgcagcggtatttcccatcctaacttcagaacaacttgctgaagtt gtgccaatgaaagaggaattgaatattatgaaaatatatactcataaaggagaaattgtcacagtctatgccaatggcaa aaatcctatcctttttgaaatggagaaaatgatatatccaacagtgtacacgctgtggtcttatccccatcttctccctg ccttttctacttggccacctgtggtgcacaaattagtaggaggagcagatttaatgcttccaggagttatcgtccccaaa tgtggtctcccccaggtaaatcgaggtagtctctgtgctgttaccttggtggaaaacagagcccctgtggccattggaat agctattatgacaactgctgagatggtggcagctggaatgaaaggaaaaggtttcacagtgctgcacacttacatggatc acctatgggccattggtgacaaatcaagcccgcctacaatacccctcttagaaatagaatcttcaaagatgatagctgaa gaagaagaggaacagaagaaggaagaaggggtaacacctgaaagcagcctctctcttgatccatccttgcagatggacat agaacatctcaccctagaggaagatatttcgcatactgtcatggatgaaaaagaggaactcagtcagagtgatgctgctg aaaagactgaagagaatgaaccaaatatttctcaggagatggaagataacagaagtccacaagagcaaatggatgccctg cttcatcaatgtttctttcatgccttaaaatgtaaagtgaagaagtcagagctccccctgctgaccagtacgtttttgcg taactacatattttcctgctgtccaaaagatcaacaactggatataaagaaatctagctacaaaaagttctcaaaatttc tgcagtcagtgcaacagcagaagattcttcaggtgaaagagttgagtaagggtgtggaaagtattgtggacatagattgg aaacatgaaagcattagatccttcatagtacctgaaagtgcaacatctgaaatgtctgtccaagaccataaaggtgatga tcaagaacaactgtaccatcctcctgaaattatgcaactttatggaatctcatcaaaaatggccccattgtttcaagagt ctggacataaaaaaggccataccctctccagcggtgaagtgagaagtgtgatcatcaactatgtaaaggctaatgagttg gttgatgaaataaacaaaaactttgtaaaggtgaatccaattttgtgcgattgtctgttggacaaagcagagcaagatga aatctcaaggctcaagtgggatgacctcctcagcaggtgtctaaacaaactagaacctttccatcaggtaaccttttggg gacaggaacctgttgtgagaaaaggaaatattcttccaattgatgtaaccgtagcacagagatcatccaataaaaaggtg acaataattaagaatcttgagctgtatggtttggaccctcaggctgttgctagtacccttcagcaaaaggttcaagctag tgccattatcgtcgcaatccctggagcaaaggacagatcacaagtccagatacagggcaatcagatcaatcatcttgcta aactgctcttagaggactaccagataccttacagttatatccagggtcttaagaaagcaccaaagacggggcggaagaaa tagccaggcctgtacctcagattcagaaatagctctgtggaatcactcgaccaacatgcagtggatgcagtctggactca gaggcaatttggtctgtgcattgacgacgatctaaattgtgtaatttattggaatgtgtttcttgctcacatagaggtag atgaatatgtaggataaatcaaaaggaaatggtaccagtaaagctacatagaaaaataaagtctgaaagatttctgttgg ta |
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Protein
| Protein ID | habu1_s10520_g20093.t1 |
|---|---|
| Definition | - |
>habu1_s10520_g20093.t1 MKEELNIMKIYTHKGEIVTVYANGKNPILFEMEKMIYPTVYTLWSYPHLLPAFSTWPPVVHKLVGGADLMLPGVIVPKCG LPQVNRGSLCAVTLVENRAPVAIGIAIMTTAEMVAAGMKGKGFTVLHTYMDHLWAIGDKSSPPTIPLLEIESSKMIAEEE EEQKKEEGVTPESSLSLDPSLQMDIEHLTLEEDISHTVMDEKEELSQSDAAEKTEENEPNISQEMEDNRSPQEQMDALLH QCFFHALKCKVKKSELPLLTSTFLRNYIFSCCPKDQQLDIKKSSYKKFSKFLQSVQQQKILQVKELSKGVESIVDIDWKH ESIRSFIVPESATSEMSVQDHKGDDQEQLYHPPEIMQLYGISSKMAPLFQESGHKKGHTLSSGEVRSVIINYVKANELVD EINKNFVKVNPILCDCLLDKAEQDEISRLKWDDLLSRCLNKLEPFHQVTFWGQEPVVRKGNILPIDVTVAQRSSNKKVTI IKNLELYGLDPQAVASTLQQKVQASAIIVAIPGAKDRSQVQIQGNQINHLAKLLLEDYQIPYSYIQGLKKAPKTGRKK |
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