Gene
| Gene Model ID | habu1_s10520_g20098 |
|---|---|
| Locus | habu1_scaffold10520 : 520435 ... 540323 : + |
| To GenomeBrowser | habu1_scaffold10520:520435..540323 |
| Genes list of scaffold | habu1_scaffold10520 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rab-7b isoform x2 | GO:0005525 GO:0005764 GO:0005770 GO:0005802 GO:0007264 GO:0015031 GO:0032755 GO:0034144 GO:0034164 GO:0034499 GO:0045335 GO:0045654 GO:0051092 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s10520_g20098.t1 | 1 | 1 | Arf | 6 | 161 | 2.2e-17 | 62.8 | 3.0e-20 | 2.8e-17 | 62.4 |
| habu1_s10520_g20098.t1 | 1 | 1 | Ras | 10 | 172 | 0.0 | 171.3 | 0.0 | 0.0 | 171.1 |
| habu1_s10520_g20098.t1 | 1 | 1 | Miro | 10 | 127 | 3.2e-20 | 72.7 | 6.0e-23 | 5.6e-20 | 72.0 |
| habu1_s10520_g20098.t1 | 1 | 1 | Gtr1_RagA | 10 | 166 | 5.1e-07 | 29.0 | 7.8e-10 | 7.2e-07 | 28.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s10520_g20098.t1 | gi|602630587|ref|XP_007422207.1| | PREDICTED: ras-related protein Rab-7b isoform X2 [Python bivittatus] | 0.0 |
| habu1_s10520_g20098.t1 | gi|602630585|ref|XP_007422206.1| | PREDICTED: ras-related protein Rab-7b isoform X1 [Python bivittatus] | 0.0 |
| habu1_s10520_g20098.t1 | gi|327278641|ref|XP_003224069.1| | PREDICTED: ras-related protein Rab-7b [Anolis carolinensis] | 0.0 |
| habu1_s10520_g20098.t1 | gi|558226281|ref|XP_006137280.1| | PREDICTED: ras-related protein Rab-7b-like [Pelodiscus sinensis] | 0.0 |
| habu1_s10520_g20098.t1 | gi|557283892|ref|XP_006024810.1| | PREDICTED: ras-related protein Rab-7b-like [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.8 |
| Venom grand-1 | 0.7 |
| Pit, infrared sensing | 3.3 |
| Nose | 3.3 |
| Brain-1 | 0.5 |
| Eye | 1.2 |
| fetal fibroblast | 2.6 |
| venom gland-2 | 1.8 |
| Brain-2 | 1.2 |
| Spleen | 1.4 |
| Lung | 5.1 |
| Liver | 0.7 |
| Kidney | 0.8 |
| Pancreas | 0.9 |
| Small intestine | 1.2 |
| Large intestine | 3.6 |
| Stomach | 2.4 |
| heart | 0.4 |
| ovary | 0.9 |
| cheek muscle | 0.8 |
Transcript
| Transcript ID | habu1_s10520_g20098.t1 |
|---|---|
| Definition | - |
>habu1_s10520_g20098.t1 cggaggactcagaggctctagttccgaactttcccggagagtcagcacaacccggcaacaaaacgtcaaacccggcagaa gcaacgccagtcccacattcatgggtccaagtaaaaaagtggatttgaaaatcattatcattggagccttgggtgtagga aaaacttctctcctacatcagtatattcacaagagattttatgaagactatcgcaccaccctgggagctagtattttgtc caaagttatggaagtagatcacacaccactgaaattgcagatttgggacactggaggccaggaacgattccggtccattg tgtccacattctacaaaggttcagatggttgcatgctggcttttgatgtcacagatatggattcttttgagtccttggat gtttggaggaatgattttcttcagaaagtcaactctacagagcaaggcttcccaatggttgtgctggggaataaaattga tctgaaagatcgacaagtgtccaaggagatggcttcatcatggtgcaaggagaaggatatagcatattttgaagttagtg ccaaaaatgatattaatgtggtgcaggcttttgagaccctgacaaggcaagccctatcaagatatcaaggggtgattgag agctacctaaccgaatctataaagctaagtccagaagatcagcccacaaccagatgttgctgacatctcgtttggaatga ttgacatttggatacagtttgaaagctggcacgtggaacagctgctgctactggggaatgctgctcatcagggtgaaaga tgcactaatataacaatattgccctttggcatcc |
|
Protein
| Protein ID | habu1_s10520_g20098.t1 |
|---|---|
| Definition | - |
>habu1_s10520_g20098.t1 MGPSKKVDLKIIIIGALGVGKTSLLHQYIHKRFYEDYRTTLGASILSKVMEVDHTPLKLQIWDTGGQERFRSIVSTFYKG SDGCMLAFDVTDMDSFESLDVWRNDFLQKVNSTEQGFPMVVLGNKIDLKDRQVSKEMASSWCKEKDIAYFEVSAKNDINV VQAFETLTRQALSRYQGVIESYLTESIKLSPEDQPTTRCC |
|