Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s10520_g20099
Locus habu1_scaffold10520 : 579555 ... 621196 : +
To GenomeBrowser habu1_scaffold10520:579555..621196
Genes list of scaffold habu1_scaffold10520

Annotation by Blast2GO
Annotation GO
solute carrier family 26 member 9 GO:0005254 GO:0006885 GO:0008271 GO:0009986 GO:0010628 GO:0015106 GO:0015301 GO:0015701 GO:0016021 GO:0016324 GO:0051117 GO:0070062 GO:1902358 GO:1902476

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s10520_g20099.t1 1 1 Sulfate_tra_GLY 56 138 1.1e-26 92.2 3.9e-30 1.1e-26 92.2
habu1_s10520_g20099.t1 1 1 Sulfate_transp 187 465 0.0 186.1 0.0 0.0 186.1
habu1_s10520_g20099.t1 1 1 STAS 520 747 1.4e-23 82.5 9.5e-27 2.8e-23 81.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s10520_g20099.t1 gi|591381241|ref|XP_007065158.1| PREDICTED: solute carrier family 26 member 9 [Chelonia mydas] 0.0
habu1_s10520_g20099.t1 gi|558226278|ref|XP_006137279.1| PREDICTED: solute carrier family 26 member 9 [Pelodiscus sinensis] 0.0
habu1_s10520_g20099.t1 gi|602630593|ref|XP_007422210.1| PREDICTED: solute carrier family 26 member 9 [Python bivittatus] 0.0
habu1_s10520_g20099.t1 gi|637326806|ref|XP_008113858.1| PREDICTED: solute carrier family 26 member 9 [Anolis carolinensis] 0.0
habu1_s10520_g20099.t1 gi|641774896|ref|XP_008170950.1| PREDICTED: solute carrier family 26 member 9 [Chrysemys picta bellii] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 12.0
Venom grand-1 0.1
Pit, infrared sensing 2.2
Nose 0.2
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.3
Spleen 0.6
Lung 2.8
Liver 0.0
Kidney 0.0
Pancreas 1.2
Small intestine 0.0
Large intestine 0.0
Stomach 20.4
heart 0.0
ovary 0.0
cheek muscle 0.4

Transcript
Transcript IDhabu1_s10520_g20099.t1
Definition-
>habu1_s10520_g20099.t1
aaccggtcataagtcgaagactttccctgcccgggagtgccgtgcatgtgtggttccgcccccagcgccggccgaggcgt
agctggcaagcggcagagacggagcaggccgaccaccagctggcccagcccaagggagttgacttccatttcactttggg
ggtgaaagatttcatgaagcaaaaatgattgaaactcggccacgctacatcatcaaccgtccagcttattctagcaacta
ctttgatgaagaatttgacaggaaaagtagaagttatccccttggagagaaaataaagaatcttttcagatgttcaccat
ctagactcaaactcatcctttacagtctatttcccatacttgtatggcttccaaaatacaaaatcagagattacattgtg
cctgatgtccttggtggagtaagtgctggaactattcaagtacctcaaggcatggcttttgctctgctggccaacctacc
tccagtcaatgggctctattcttctttctttcctttgattacctattttttgctaggaggtattcctcagatggtcccag
gtacatttgcagtcatcagtattatcgtaggaaacgtctgccatgaactggctccggattctgaatttcaatattttaac
cacacagctaaggaaattatggttaacaacacagccatggaagcagccagactggagatctctgccactttggcttgtct
gacagctttaatacaaatatgcctgggatttgtgcaatttggctttgtagccatctacctttcagagtccttcattaggg
gtttcatgacagcagctggtctacagatcctcgtctcggttctcaagtatatctttggtctgaagattgaagcctacaca
ggaccctttgccattgtctatacctttattgatatttgcaaaaatctgttgaaaaccaatgtggcttctctggtgtttgc
tttgatcagctctgtgcttctcatcattgtgaaagagctaaatatgaaatatatgaagaagattcgagtcccaattccca
tggagatcattatagtcattgtggctacggtcatttctggaagttttaatatgcctgagaaatatgacatgccaattgtt
ggacttattaatatggggtttccatctgccacacttccactagtgggcaaatggaaatatatgattggcccagctttttc
acttgccattgtgggctatgtgatcaacctagccatgggcagaacccttgggaataagcatggctatgatgtggacccaa
atcaggaaatgttggccctgggctgcagtaacttttttggatccttttttaaaatccatgtgatctgctgtgcgctttca
gtcaccttagctgtggatggagctggtggaaaatctcaggtggcaagtttttgtgtagcattggtggtaatgataaccat
gttgtctttgggaagctatcttagccctcttccaaaggcagttctaggagctttgatagctgtaaatttgaagaattctc
tcaagcaactgactgatccatattacctctggaaaaaaagcaagttggattgtatggtttgggtggtgagcttcctatca
gctttcttcctaggcttgccttttggactcgctgtgggagtgggtttttccatcctggtggtagttttccacacccagtt
ccgcaatggttctgtccttggccctgtagcttctactgatatatacaagaaccccaaagtctacagcaaggttcaagaaa
tagaagggattaaaattgtcacctactgctccccactatactttgccaattcagaaatattcagggagaaagttatcgca
aagactggcgtggatcccatcaaagtctacttggccagaaaaaaatttgtgaaaaatcaagaaaaggtgacagcagcagt
acagaaaacgagcaaattaaaatctatcttcagaaaagacaagactgtgtctctgcaagaactccagaaggattttgaaa
gtacttctccaacagataccaataacaaccagacagctgccaatggcaacagcatctcctatattgtcttcaacccatct
gtgaactcttcaagtccaaataatacctcatgtgaacaaagaagcacatctgatcataggaacagcaactgcagcattat
tccagcctccagtattgatcctatgagcatagcacccccttttgttaatttccacaccattattcttgacatgagtggag
tttgctttgtggatctgatgggtacaaaagctttgggaaagctatgtaccaactatcaaaggattgggattaaagtcttt
cttgcaaatatatctgctcaagtgtatgatgacatttgcactggtggagtttttgaagaaggaggtcttgagccttgtca
cctctttgtgaccatccatgatgctgttttgtttgcaacgatgaacagcagcagagctacttgtcattctgtcctagaac
agaggtcaaatcagattgaagtctctgtctcggatgaatctctggaagatagcagtgctgaattccaaaatttggaagag
gaaatgtttggaagcatttttcattcggaaacacaaacagcgctgtgagcaactcaggaacattcctgtgatggcaaatt
atttgttcatgatgtttctttatgaaggtccctgtgcctgaatggcaaggaaattggcctttctggcaaggggccatggg
tgcttctatagcactgaggacagaatgtctctcggatctggtattttcttctgtaattcctcttggattatgaacctcag
agcacctgactcttgaaacagttggcatggaaggaagaaactcagggaatatatttcatccatcttgaagaagccgaagg
atagcttgaatatcttctggatcatattttcctcctcttacatcctttatttatggagccataagtatgcatgtagcaca
catgcttgtctattaattttccagcattgttctcatgagggaaatcaaaggaaaatatggaaaatatttgattgccagat
aaagtgctcaaattgcagcagtttc

Protein
Protein IDhabu1_s10520_g20099.t1
Definition-
>habu1_s10520_g20099.t1
MIETRPRYIINRPAYSSNYFDEEFDRKSRSYPLGEKIKNLFRCSPSRLKLILYSLFPILVWLPKYKIRDYIVPDVLGGVS
AGTIQVPQGMAFALLANLPPVNGLYSSFFPLITYFLLGGIPQMVPGTFAVISIIVGNVCHELAPDSEFQYFNHTAKEIMV
NNTAMEAARLEISATLACLTALIQICLGFVQFGFVAIYLSESFIRGFMTAAGLQILVSVLKYIFGLKIEAYTGPFAIVYT
FIDICKNLLKTNVASLVFALISSVLLIIVKELNMKYMKKIRVPIPMEIIIVIVATVISGSFNMPEKYDMPIVGLINMGFP
SATLPLVGKWKYMIGPAFSLAIVGYVINLAMGRTLGNKHGYDVDPNQEMLALGCSNFFGSFFKIHVICCALSVTLAVDGA
GGKSQVASFCVALVVMITMLSLGSYLSPLPKAVLGALIAVNLKNSLKQLTDPYYLWKKSKLDCMVWVVSFLSAFFLGLPF
GLAVGVGFSILVVVFHTQFRNGSVLGPVASTDIYKNPKVYSKVQEIEGIKIVTYCSPLYFANSEIFREKVIAKTGVDPIK
VYLARKKFVKNQEKVTAAVQKTSKLKSIFRKDKTVSLQELQKDFESTSPTDTNNNQTAANGNSISYIVFNPSVNSSSPNN
TSCEQRSTSDHRNSNCSIIPASSIDPMSIAPPFVNFHTIILDMSGVCFVDLMGTKALGKLCTNYQRIGIKVFLANISAQV
YDDICTGGVFEEGGLEPCHLFVTIHDAVLFATMNSSRATCHSVLEQRSNQIEVSVSDESLEDSSAEFQNLEEEMFGSIFH
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