Gene
| Gene Model ID | habu1_s10520_g20100 |
|---|---|
| Locus | habu1_scaffold10520 : 629245 ... 643881 : + |
| To GenomeBrowser | habu1_scaffold10520:629245..643881 |
| Genes list of scaffold | habu1_scaffold10520 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable carboxypeptidase pm20d1 | GO:0004180 GO:0006508 GO:0050691 GO:0050792 GO:0070062 GO:1901215 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s10520_g20100.t1 | 1 | 1 | M20_dimer | 42 | 186 | 5.8e-15 | 55.0 | 1.7e-18 | 8.6e-15 | 54.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s10520_g20100.t1 | gi|602630597|ref|XP_007422212.1| | PREDICTED: probable carboxypeptidase PM20D1 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s10520_g20100.t1 | gi|602630595|ref|XP_007422211.1| | PREDICTED: probable carboxypeptidase PM20D1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s10520_g20100.t1 | gi|637326802|ref|XP_008113857.1| | PREDICTED: probable carboxypeptidase PM20D1 [Anolis carolinensis] | 0.0 |
| habu1_s10520_g20100.t1 | gi|591381358|ref|XP_007065215.1| | PREDICTED: probable carboxypeptidase PM20D1 [Chelonia mydas] | 0.0 |
| habu1_s10520_g20100.t1 | gi|558226401|ref|XP_006137328.1| | PREDICTED: probable carboxypeptidase PM20D1 [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.5 |
| Venom grand-1 | 0.8 |
| Pit, infrared sensing | 1.7 |
| Nose | 1.1 |
| Brain-1 | 0.6 |
| Eye | 0.9 |
| fetal fibroblast | 2.7 |
| venom gland-2 | 1.7 |
| Brain-2 | 2.1 |
| Spleen | 1.2 |
| Lung | 0.9 |
| Liver | 8.4 |
| Kidney | 4.1 |
| Pancreas | 3.4 |
| Small intestine | 10.8 |
| Large intestine | 1.6 |
| Stomach | 3.4 |
| heart | 1.5 |
| ovary | 3.2 |
| cheek muscle | 1.4 |
Transcript
| Transcript ID | habu1_s10520_g20100.t1 |
|---|---|
| Definition | - |
>habu1_s10520_g20100.t1 ggtcgcggcattaaaaaggtgggtggcaaaaaaggagcaatgaaaattgtggctgagctggaatctagaggggtacaact ttcttttgtgcttgatgaaggaagctttatttttgatggagtcatccctaaaatagagaaaccagtagctgtaataggta tcacagaaaagggtgcacttgatgtaaatctcagtgtaacatctcaagttggccattcttctacaccccctaagaggacc agcattggtattctttctgaagcattatacaagttggaaacacagcctatgcctaatttgtttggtcatggacctgaaat catgatgtttgaacaactggtaccagtgttcggcttccccctcaatatcatcatggcaaatctgtggctcttcggacctc ttgttggctggtttcttgagcaaactcctggcactaatgctttagttcggaccaccactgcaatcaccatgtttcatgca ggaataaagtcaaatgttattccaccaaaagctgatgccacagtgaatttccgcatccactcatcacaaaccattgagga ggtcctggaaatattagacaaaacaattaatgataagagagtgaagatagaagtgatggatacctttgatccaccccccg ttagcccctgggacgaccagacctttgctgtacgggtcttccgccagaccaccctggatgttttcccagatgttgccagt gtagctccaggcatttgtgttggaaacactgatagcaggcactacagcagcctcacaaaggctatttatcgatttaaccc agtaacctttaaagctgaagatttgccaagattccatgggctgaatgaaaggatctctatggaagtttatgcaaagcaag tggaatttttctttcaactaattcaaaattgtgatttgaaccaacccacagagccacatgcaaaccttcacgagctatag aaacaagaaaatataaaggcttgtgggagttgttagaaatctgaactattcaaagcagcagtgttctatgttgttctcag tgcccaaacctcattactgtattagagatttaaagtaataacacaacctagttgcactgcaagttgttgtgaaacaaact attaaacataacaattcaacaaattatt |
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Protein
| Protein ID | habu1_s10520_g20100.t1 |
|---|---|
| Definition | - |
>habu1_s10520_g20100.t1 MKIVAELESRGVQLSFVLDEGSFIFDGVIPKIEKPVAVIGITEKGALDVNLSVTSQVGHSSTPPKRTSIGILSEALYKLE TQPMPNLFGHGPEIMMFEQLVPVFGFPLNIIMANLWLFGPLVGWFLEQTPGTNALVRTTTAITMFHAGIKSNVIPPKADA TVNFRIHSSQTIEEVLEILDKTINDKRVKIEVMDTFDPPPVSPWDDQTFAVRVFRQTTLDVFPDVASVAPGICVGNTDSR HYSSLTKAIYRFNPVTFKAEDLPRFHGLNERISMEVYAKQVEFFFQLIQNCDLNQPTEPHANLHEL |
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