Gene
| Gene Model ID | habu1_s10520_g20103 |
|---|---|
| Locus | habu1_scaffold10520 : 704345 ... 716497 : + |
| To GenomeBrowser | habu1_scaffold10520:704345..716497 |
| Genes list of scaffold | habu1_scaffold10520 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rab-7l1 | GO:0005525 GO:0005802 GO:0007030 GO:0007264 GO:0035526 GO:0070062 GO:0090316 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s10520_g20103.t1 | 1 | 1 | Arf | 2 | 163 | 9.0e-18 | 64.1 | 9.8e-21 | 1.1e-17 | 63.7 |
| habu1_s10520_g20103.t1 | 1 | 1 | Ras | 3 | 168 | 5.60519e-45 | 152.7 | 0.0 | 5.60519e-45 | 152.4 |
| habu1_s10520_g20103.t1 | 1 | 1 | Miro | 3 | 122 | 2.2e-18 | 66.8 | 3.1e-21 | 3.5e-18 | 66.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s10520_g20103.t1 | gi|602630601|ref|XP_007422214.1| | PREDICTED: ras-related protein Rab-7L1 [Python bivittatus] | 0.0 |
| habu1_s10520_g20103.t1 | gi|637326795|ref|XP_003224067.2| | PREDICTED: ras-related protein Rab-7L1 [Anolis carolinensis] | 0.0 |
| habu1_s10520_g20103.t1 | gi|530639394|ref|XP_005306490.1| | PREDICTED: ras-related protein Rab-7L1 [Chrysemys picta bellii] | 0.0 |
| habu1_s10520_g20103.t1 | gi|564257846|ref|XP_006267871.1| | PREDICTED: ras-related protein Rab-7L1 [Alligator mississippiensis] | 0.0 |
| habu1_s10520_g20103.t1 | gi|663282402|ref|XP_008498904.1| | PREDICTED: ras-related protein Rab-7L1 [Calypte anna] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.8 |
| Venom grand-1 | 2.4 |
| Pit, infrared sensing | 3.5 |
| Nose | 2.2 |
| Brain-1 | 0.7 |
| Eye | 1.5 |
| fetal fibroblast | 3.3 |
| venom gland-2 | 1.7 |
| Brain-2 | 0.6 |
| Spleen | 3.0 |
| Lung | 4.3 |
| Liver | 6.2 |
| Kidney | 3.8 |
| Pancreas | 3.3 |
| Small intestine | 4.4 |
| Large intestine | 4.0 |
| Stomach | 4.9 |
| heart | 3.6 |
| ovary | 114.0 |
| cheek muscle | 3.2 |
Transcript
| Transcript ID | habu1_s10520_g20103.t1 |
|---|---|
| Definition | - |
>habu1_s10520_g20103.t1 attcatatgactgaaacaacacttctgggagtggtatatttggtctccttgcccctaaattaagggtgtgcttggtggga aagaggtatccttgcagccggaaagaccaggaagcgacccttttggaaagggaagaggaggcagcacccgcttcttttaa ttgggtttggtgtccagtcatggtgggccatcacgaccacatgttcaaagtcttaattattggtgatgccacagttggga agacatcgttagttcagcgatatgctaatgatagtttcaacaaggactacaagcctacggtaggagtggattttgctctg aaggtggtgcaatggtcagagtccgagacagtgaggttacagctatgggacattgctggtcaggaacgtttcacatcaat gactcgactgtattacagggaggcatcagcctgtgtcgtcatgtttgatgtcaccgattttagcacattcaccagttgcc agaaatggaaacaagatttggacagcaaggtgaaactgcaagatggaagtcctgtcccttgtctgttattggctaataag agtgacctttatccgtgggctatgactagagaagaaattgatcaattcagcaaggagaatggctttactggttggactga gacatctgtaaaggaaaacaaaaatgtaaatgagtcaatgagggtccttgttgaaaaaatgatggctacaacatggctag gtgttaatgatatgtctgtttcaggccatggagactatatcaatttgaaagatggatccacatccaactggggttgctgc taactatatttgcttcttcatctgaccagaggtctaaagatctaatttgcctctttcagattctgatgaattacttgcct tcagccatccaactaagaagggttatatagcagcatggcaggctctttgaaaggccacctactggtttagtgatctgagg gacaaaacagaacagagagtgtagcagaataaaagctaaagttaaaatatttcct |
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Protein
| Protein ID | habu1_s10520_g20103.t1 |
|---|---|
| Definition | - |
>habu1_s10520_g20103.t1 MFKVLIIGDATVGKTSLVQRYANDSFNKDYKPTVGVDFALKVVQWSESETVRLQLWDIAGQERFTSMTRLYYREASACVV MFDVTDFSTFTSCQKWKQDLDSKVKLQDGSPVPCLLLANKSDLYPWAMTREEIDQFSKENGFTGWTETSVKENKNVNESM RVLVEKMMATTWLGVNDMSVSGHGDYINLKDGSTSNWGCC |
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