Gene
| Gene Model ID | habu1_s105_g00540 |
|---|---|
| Locus | habu1_scaffold105 : 51267 ... 66135 : - |
| To GenomeBrowser | habu1_scaffold105:51267..66135 |
| Genes list of scaffold | habu1_scaffold105 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related c3 botulinum toxin substrate 1 isoform x1 | GO:0001934 GO:0003924 GO:0005525 GO:0005802 GO:0005829 GO:0005884 GO:0005925 GO:0006954 GO:0007411 GO:0009887 GO:0010310 GO:0010592 GO:0016032 GO:0030027 GO:0030041 GO:0030168 GO:0031295 GO:0031410 GO:0031529 GO:0031996 GO:0032707 GO:0035025 GO:0036464 GO:0038095 GO:0038096 GO:0043065 GO:0044459 GO:0045087 GO:0048010 GO:0048011 GO:0048013 GO:0048261 GO:0050690 GO:0051022 GO:0051496 GO:0051668 GO:0051894 GO:0060263 GO:0060429 GO:0061024 GO:0070062 GO:0071526 GO:0090023 GO:0097190 GO:1900026 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s105_g00540.t1 | 1 | 1 | Miro | 57 | 102 | 4.3e-06 | 27.2 | 1.0e-09 | 7.4e-06 | 26.4 |
| habu1_s105_g00540.t1 | 1 | 1 | Ras | 59 | 161 | 1.1e-21 | 76.9 | 2.0e-25 | 1.5e-21 | 76.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s105_g00540.t1 | gi|602674273|ref|XP_007442628.1| | PREDICTED: ras-related C3 botulinum toxin substrate 1, partial [Python bivittatus] | 0.0 |
| habu1_s105_g00540.t1 | gi|527250210|ref|XP_005143418.1| | PREDICTED: ras-related C3 botulinum toxin substrate 1 isoform X1 [Melopsittacus undulatus] | 0.0 |
| habu1_s105_g00540.t1 | gi|564252618|ref|XP_006265331.1| | PREDICTED: ras-related C3 botulinum toxin substrate 1 isoform X1 [Alligator mississippiensis] | 0.0 |
| habu1_s105_g00540.t1 | gi|543358001|ref|XP_005523017.1| | PREDICTED: ras-related C3 botulinum toxin substrate 1 isoform X1 [Pseudopodoces humilis] | 0.0 |
| habu1_s105_g00540.t1 | gi|9845509|ref|NP_061485.1| | ras-related C3 botulinum toxin substrate 1 isoform Rac1b [Homo sapiens] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 69.9 |
| Venom grand-1 | 73.6 |
| Pit, infrared sensing | 44.2 |
| Nose | 85.4 |
| Brain-1 | 25.2 |
| Eye | 25.7 |
| fetal fibroblast | 163.1 |
| venom gland-2 | 72.3 |
| Brain-2 | 23.4 |
| Spleen | 18.5 |
| Lung | 84.6 |
| Liver | 15.6 |
| Kidney | 26.7 |
| Pancreas | 9.3 |
| Small intestine | 34.8 |
| Large intestine | 28.0 |
| Stomach | 44.1 |
| heart | 28.9 |
| ovary | 57.3 |
| cheek muscle | 39.7 |
Transcript
| Transcript ID | habu1_s105_g00540.t1 |
|---|---|
| Definition | - |
>habu1_s105_g00540.t1 gcttcctgtttcctccgcgctcgcctcagtcgcccgccccgcgctttgggtggtggccgttgcctcctccgctcccgccg ccgccgccgccgccgccctcctcgccctcctctcggcgccctcactgcggttccttccaggggaggcagcagcagccgaa gcccgagagacaagccgaggccgcccagggcctttccttccgcccacgctcgccccgaccgagcagccgccccgatgcag gccatcaagtgtgtggtggtgggcgacggggttcagcttccagaattctcagcaatggctctgcagactgtggaattctg ggatttgaagtccatcgacttggctattgccaaggttgaaggaacgaatggtaaggatttaactcccagtgggaagcgtc agccactctgcgatgtgttcttaatttgcttttccctggtgagcccagcatcctttgaaaatgtccgtgcaaagtggtat ccagaagtgcgacaccattgccccaatacccccatcatcctagtgggaaccaaacttgatctccgagatgacaaggacac tatcgaaaaactcaaggagaagaagctgactccgatcacctacccacaaggccttgccatggcgaaggagattggtgcag tcaaatacctagaatgctcagcactcacacagcggggcctcaagaccgtcttcgacgaagccatccgagccgttctgtgc ccccctcctgtaaagaagaggaagaggaaatgcctgctgctctaatgacccttaaccaccccccccagcccccactccaa aaccttttgtgctttgcttggaataatggagcattcctgcgtttctgtttttttaaaaaattggttctctcctcttctgg ttatcttaaacagtcaccttacacttccctttgtttaaaaaagttagcttctccttaattctcctacagagatttttttt taaagacaaacttaaataaaggccttatttctctccctcccccttcctttttcgctccgcttaatcaactgttgccaaat ttttctgctccttactcttcttggattgctgtgctttgttacgtgaagcaccggacctgtctttttcctttaaaaagcca ggcaggtgtctttaaaaaaaaatactaatgtttattagcagttgcaacacttggatggggttttcccaggaagaaaatat tcctctctaaaaaaaaaaaaaagtgcactcgttcatccgacagcttcttcacatccatctttcaagcttgaacaaatgca ataattgacaactccagattcacccttccctttttaaaaaaacacacaaaaaaacaaaaaaaaaataaatcaaatttact aaggtctgcga |
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Protein
| Protein ID | habu1_s105_g00540.t1 |
|---|---|
| Definition | - |
>habu1_s105_g00540.t1 MQAIKCVVVGDGVQLPEFSAMALQTVEFWDLKSIDLAIAKVEGTNGKDLTPSGKRQPLCDVFLICFSLVSPASFENVRAK WYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAV LCPPPVKKRKRKCLLL |
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