Gene
| Gene Model ID | habu1_s105_g00542 |
|---|---|
| Locus | habu1_scaffold105 : 117352 ... 142635 : - |
| To GenomeBrowser | habu1_scaffold105:117352..142635 |
| Genes list of scaffold | habu1_scaffold105 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase 42 | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s105_g00542.t1 | 1 | 1 | UCH | 110 | 408 | 0.0 | 198.2 | 0.0 | 0.0 | 197.3 |
| habu1_s105_g00542.t1 | 1 | 1 | UCH_1 | 110 | 390 | 7.7e-26 | 91.2 | 2.3e-29 | 1.7e-25 | 90.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s105_g00542.t1 | gi|602636726|ref|XP_007425215.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Python bivittatus] | 0.0 |
| habu1_s105_g00542.t1 | gi|637355229|ref|XP_003227691.2| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Anolis carolinensis] | 0.0 |
| habu1_s105_g00542.t1 | gi|591371803|ref|XP_007060712.1| | PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 42 [Chelonia mydas] | 0.0 |
| habu1_s105_g00542.t1 | gi|530635810|ref|XP_005304763.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Chrysemys picta bellii] | 0.0 |
| habu1_s105_g00542.t1 | gi|395514662|ref|XP_003761533.1| | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.3 |
| Venom grand-1 | 2.8 |
| Pit, infrared sensing | 2.9 |
| Nose | 2.9 |
| Brain-1 | 2.2 |
| Eye | 2.4 |
| fetal fibroblast | 3.6 |
| venom gland-2 | 2.4 |
| Brain-2 | 2.2 |
| Spleen | 2.2 |
| Lung | 3.2 |
| Liver | 2.8 |
| Kidney | 3.4 |
| Pancreas | 2.9 |
| Small intestine | 3.3 |
| Large intestine | 2.8 |
| Stomach | 1.8 |
| heart | 1.9 |
| ovary | 2.7 |
| cheek muscle | 1.3 |
Transcript
| Transcript ID | habu1_s105_g00542.t1 |
|---|---|
| Definition | - |
>habu1_s105_g00542.t1 agttgcggctttgtgtaaccacaatttacagtgtttcggggtgatttctggcacaagatcccgtttaaaggaaagaattt gccttcaggaccacatggttgcttaacgatcctttggtgactgccgttaacagggtcataaagtgaggcttaatatcaag tccaatcactggcaacagcttttgactgatacttcggtcttcgctgtggttagatgaaccatgaccatagttgacaagac ggccgagtcctccaaggcctctgcttctgagaagcaacctttcaactccgtggcgccagcttccggtgacatggactcgg gctcagcaggatgggtcgctgtgtcttcttcgttagaggctccaaaacacaagagctcgatggggccagtgccgggagcc gcgctgtattccactacatcaggaccagataaatgcaagccttccgccaaagagctggtgatcggtgacgggattgcggc cccccagaaagtccttttcccagcagagaagatttgcttaaaatggcaaaagatgcatcgggtcggagctggtctccaaa acctgggcaacacctgtttcctaaactctgctctgcagtgtctgacgtacacccctcccctggccaactacatgctctcc tacgaacactccaaaacctgtcacgaacaaggattttgcatgatgtgcaccatgcaaggtcacatcaaccaagctctttc caattccggcaccgtcatcaagccgatgtctgtcataaatgatcttagacgaatagcaaaacatttccgtttcggtaacc aggaagatgcccacgaattcctaaggtacacggttgatgccatgcagaaagcatgtgtgaatggtagcaacaaattggac agacacacccaggccaccagttttattcaccagatatttggaggatacctcagatctagagtaaaatgcatgaactgcaa aggtgtttcagatacatttgatccctatttggatattacattggaaataaagtcagctcaaagtgtcaacaaagctctgg agcagtttgtcaagcctgaacagctggatggagaaaacgcgtataagtgcagcaagtgtaaaaaaatggttcctgcatcc aagcggtttacgatacatcgggcttccaatgtcctcaccttgtccctcaaacggtttgcaaatttcagtggcggcaaaat caccaaggaagtgaaatatcctgaatatttggatatccggccgtatatgtcccaacccaatggagaaccaataatttatg cactttatgcagtgctcgtccataccggcttcagctgtcacgctgggcattattactgctacataaaggccagtaacggg cagtggtaccagatgaacgattccaccgtttccaacagtgacatcaggactgtattaaaccaacaagcctacgtgctgtt ctacatcaggacccacgacttgaaaaatggtgccgaacacattcattcggttcacacgccgggacagtcttctccccgac cggttatcaatcagcgggtgctcagtaataaacagagtactccaggatttatcggacctcagctccctccacacatggtg aagaattcaaaccatttgaacggaaccggatccctgaaggaaacccccagcagcacggtggccatttctaccagcgcttc cctcgtcaaatctccttcggccccttccttgtccatctccaagtggaccatgaaccggtcagccacggccgccggccccc cggattcctccaagaagccaaaactcaccctcagtattcacaacaacaaactgcccgctcgccaaagcgtctctcacacc agctgcaccgtcgagaccctcagcaagcccgccccttcctccaccatttccaacccttccgcagtgcagtctacctcaag cagctccaccgtctcctcggccgctaaccaagtctccaaaccgagcaccccgggcaaatccggttccaagctgatcatga acggcaaggccaaacacagtcccagcatcctggtcccttacggagcggaatcctcggaagactcggaggaggaatccaaa ggcctgctgaaggagaacggccacctccaagtgcccaacggcattttatcggaaaacacggcgggcgggctggagaactc ctgcttgtcctgccacaagccggagaaggaaagcccccagcccgagttgccccagaacgtctccgtgatgctctccatca gcctaaacgaggccccgaagcagaacgggcaaataagcaacgattccacctcccaagggaagccggcaaagttggcagac cgcccctttcccaaaaccaacggcttgcccggaaaagttgctttttccagtgtttacaattttgaacggtcactaaacgg atggttcagtgctcctgagccagagaaatcaacggccgaggatgcttctgaaaaggcccccgatgcccttcccaacagta tcccaagcccgggaatacttttggaccccaacgtcacttcaaccacggaagacccttgcgaaagaattgcccagacggaa aacagaccgttggagaacgaccggcagcacagctccccagcaagagaagaagcccccacctgccctggagaaggggatgc tcaagtccttcctgaaagggcaggtgtatccaaagaggagaaagccgcttcagagacgagtcctgagcctgctgaaggac aggcagggccaccagaaaaagacacccagagcccccagatgaggttggacggtgaatctaggccccaaaagctaaagacc cctctaaacgcgcccgagacaggtcctgaattccagggcagccctctgagcagtaaagacgccccttgtaccgagaattc cccccttccccaacccaaaattgttgccgagaaccagtgttcaaagacggaaagcaaatcggcagaaggcagcgagccag tccgaagaagcctcgaaaagccgggcccgagatcctccccgaaggagaaagcccacagttacaaaaaaactgaccaagaa cattatcgtcctaaaaggaaacgttccgaaaacgaggaagaggaagaggaggaggaggtggtagcggccgacggggcagg tgggcggagccagcccgacggacactgcagcaagcagaggtgcgcttacagtagggagcgggtgaagcagcaggaccagc cccgacgggaataccacggcaccagctactacaggttcccgggcagtcccgatcccgccaggagtttagggaagtaccct ccttacccatcccgcagccggggcaaaacggactctgagcggagcaggcccagttacgggaaaggaggagagaggtcgtg gagcagggagaggtactaccaggagacgccgaggaggtgggacgcgtgccgctcgtacagttactattactcggcttccc acctgccccggcataaccaggagaggaagccgacgcattccgagagagactataacaagtcgagtcatgtttacagtagc ccctacgataaatacgattattacaaaagccggtcgaaccacgaccaggataggaaaaggcccgaggccagcgactgcgc ccccgaaaagaaacaccccaagctcttgtcggagagttctcccgacgaacaaaagggaaggaagcggaagaagtcgaaga agaagaaaaagttgaaagacaaacacaaagagaaagatgccagccccagttccttgtctgcaaaatgggtagcagagcag tcttcgcccccttcattatggggtggcagagtgaatgacccagtgaatgaatcaaagccacaggaaaccgctcttcagtc aagccacaaggacagacggcatcgccaagattccgacccgtctccctccaactccgaggccgagacccacaaacacaaac acaagaaaaagaagaagaagaaaaagaagaagcacgcgaggaaatcggaagactgcgaccaaggccctgcccctccttcc ctccccaagccggccgccctgcaaatcaagaatctcaaaagctgggagacgacgcccaaaccgcctttggaggcttgtcg gaaacacggcgcgacgacgtcttgcaaagaaactccggccgtttggcggaaatcaaaagccctggagaggagcaacaggg acggcggcttcaatccactgagagatcagaacagtggcatctcgtccctgttccgcagagttactttattacacaggttg gacttctagcctgcaccagaaaattctttggaactcaccctcgttgcaaaacgcaaagaaagatgaaatatgagagtttg gtatcgtcataaggatagtaccttgaggagctaaaaactttcagaggcctttcctagtctaaactaaaattaaattacta aactaaactaaaccta |
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Protein
| Protein ID | habu1_s105_g00542.t1 |
|---|---|
| Definition | - |
>habu1_s105_g00542.t1 MTIVDKTAESSKASASEKQPFNSVAPASGDMDSGSAGWVAVSSSLEAPKHKSSMGPVPGAALYSTTSGPDKCKPSAKELV IGDGIAAPQKVLFPAEKICLKWQKMHRVGAGLQNLGNTCFLNSALQCLTYTPPLANYMLSYEHSKTCHEQGFCMMCTMQG HINQALSNSGTVIKPMSVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACVNGSNKLDRHTQATSFIHQIFGGYLRSR VKCMNCKGVSDTFDPYLDITLEIKSAQSVNKALEQFVKPEQLDGENAYKCSKCKKMVPASKRFTIHRASNVLTLSLKRFA NFSGGKITKEVKYPEYLDIRPYMSQPNGEPIIYALYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSTVSNSDIRTVLN QQAYVLFYIRTHDLKNGAEHIHSVHTPGQSSPRPVINQRVLSNKQSTPGFIGPQLPPHMVKNSNHLNGTGSLKETPSSTV AISTSASLVKSPSAPSLSISKWTMNRSATAAGPPDSSKKPKLTLSIHNNKLPARQSVSHTSCTVETLSKPAPSSTISNPS AVQSTSSSSTVSSAANQVSKPSTPGKSGSKLIMNGKAKHSPSILVPYGAESSEDSEEESKGLLKENGHLQVPNGILSENT AGGLENSCLSCHKPEKESPQPELPQNVSVMLSISLNEAPKQNGQISNDSTSQGKPAKLADRPFPKTNGLPGKVAFSSVYN FERSLNGWFSAPEPEKSTAEDASEKAPDALPNSIPSPGILLDPNVTSTTEDPCERIAQTENRPLENDRQHSSPAREEAPT CPGEGDAQVLPERAGVSKEEKAASETSPEPAEGQAGPPEKDTQSPQMRLDGESRPQKLKTPLNAPETGPEFQGSPLSSKD APCTENSPLPQPKIVAENQCSKTESKSAEGSEPVRRSLEKPGPRSSPKEKAHSYKKTDQEHYRPKRKRSENEEEEEEEEV VAADGAGGRSQPDGHCSKQRCAYSRERVKQQDQPRREYHGTSYYRFPGSPDPARSLGKYPPYPSRSRGKTDSERSRPSYG KGGERSWSRERYYQETPRRWDACRSYSYYYSASHLPRHNQERKPTHSERDYNKSSHVYSSPYDKYDYYKSRSNHDQDRKR PEASDCAPEKKHPKLLSESSPDEQKGRKRKKSKKKKKLKDKHKEKDASPSSLSAKWVAEQSSPPSLWGGRVNDPVNESKP QETALQSSHKDRRHRQDSDPSPSNSEAETHKHKHKKKKKKKKKKHARKSEDCDQGPAPPSLPKPAALQIKNLKSWETTPK PPLEACRKHGATTSCKETPAVWRKSKALERSNRDGGFNPLRDQNSGISSLFRRVTLLHRLDF |
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