Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s105_g00546
Locus habu1_scaffold105 : 187636 ... 207881 : +
To GenomeBrowser habu1_scaffold105:187636..207881
Genes list of scaffold habu1_scaffold105

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s105_g00546.t3 8 1 MORN 105 125 4.79999e-40 132.9 3.5e-10 2.6e-06 26.8
habu1_s105_g00546.t3 8 2 MORN 128 149 4.79999e-40 132.9 5.2e-06 0.039 13.6
habu1_s105_g00546.t3 8 3 MORN 151 168 4.79999e-40 132.9 3.4e-07 0.0025 17.4
habu1_s105_g00546.t3 8 4 MORN 175 192 4.79999e-40 132.9 8.5e-08 0.00063 19.3
habu1_s105_g00546.t3 8 5 MORN 223 240 4.79999e-40 132.9 1.3e-08 9.5e-05 21.8
habu1_s105_g00546.t3 8 6 MORN 247 264 4.79999e-40 132.9 3.8e-07 0.0028 17.2
habu1_s105_g00546.t3 8 7 MORN 280 301 4.79999e-40 132.9 2.0e-08 0.00015 21.3
habu1_s105_g00546.t3 8 8 MORN 303 323 4.79999e-40 132.9 5.2e-10 3.9e-06 26.2

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.3
Venom grand-1 0.1
Pit, infrared sensing 0.3
Nose 1.2
Brain-1 0.1
Eye 0.2
fetal fibroblast 0.1
venom gland-2 0.0
Brain-2 0.2
Spleen 0.1
Lung 0.1
Liver 0.0
Kidney 0.1
Pancreas 0.1
Small intestine 0.1
Large intestine 0.1
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s105_g00546.t1
Definition-
>habu1_s105_g00546.t1
tcgcagagaaacttcaggccgtttttgcgaagggttgcaaaatagcagggatttccaaagagttcaaaataggagctcca
gtctttgcaaggacgcctcattctgccctacaacggagcgatgggtaaagataagaagaaagacagcaaaaagggagaga
aggccgcatctgctccagcccacgacacctccatcgagttagcagtctccaaccagaatgtcccacctctggcagaccaa
ggggacgagcactcggctactcggataacttccaaagaagaaaacaaagatctagagcttcctcttgtccctgaacccat
tgagtatgaagaacccatcctcacccaactgattgttgaaagttacgagggagaaaagatccgtggattatacgaagggg
aaggaacggcctattttcaaggaggcaacatctacaagggaatgttttcggaaggactcatgcacgggcgagggacttac
acatggactgatggggtgcagtacgagggaaacttcgtcaagaacgtgcaaatggatcgtggcacttacaagtggccaga
cggcagcctgtacgaaggcgaagtgaagaacgggatcagacatggctttggcatgtacaaatgtggcacctatcccgttt
cgtacatcggccactgggtggaaggcaagagacatggaaagggtaccatttactacaatgaaccgggttcttcttggtac
gaaggagactttgtgaacaatgtaaaaagtggatggggaataagatgttacaaatctggaaatatctacgaagggcagtg
ggagagagacctgcgccatggagaaggacggatgaggtggctaacatctaaccaggaatatactgggaactgggttaatg
gcatacagcacggccagggtacccatacctggtatctgaagaggatagctgggtcacagtatcccctgaggaatgagtac
gttggagacttcgtcaacggcgaccggcacggacacggaaaattcttctttgccagtggtgccatgtacgatggagaatg
ggtgctgaacaaaaagcatggcaagggcaagctagtcttcaagaacggccgggtgtacgaaggcgactttaactacgatc
acatagcggagtgtccgtccttgcaaattgacatgaccaacatggaagagctgagcaaccttcctctgaagggtttttct
ggcatagatagtgtcaaagttgtggatcattcaaggagttcctcttcgtcgggaccaaacattgaaatagatctatcaac
cttgttggctatatttccggaaaaagacagggaggatgaaatgaaacagaccgaatacgccgtgctgagatatatctctg
agctgaggaggatctacaccttttacagcagcctgggctatgaccactccctggacaacaccttcctgatgaccaagctt
cagttctggaggttcttgaaggactgcagatttcattactgcaaccagacactcgcctccatggaccggattctgaacga
taaaacattactggaagagattcattctccatatgagactttgctccttaggatgtttttgacctacctcatttacttgt
ccttccacatttaccacaaggattttgatgacacaagtcctcgcctgttcaagtgtttctccaagctgatggtcaagaat
atttgtcccaacgcctgccgtatcaaaggtatactgttcagtgaccgacagcaagctgtctatgtgctcagttacattga
caagtgctgggagattttccaggcgttctgtagaccaagtactctgcctccttatgaacctacaatgacgatgaggcact
tcctgtggatgttgaaagatttaagactgataaccaaacaactgacagctaccaaggttgtggacattctggctaaagac
aatccttcagtctccgatgcagagactgtcaatctggaacacgagcttgtcttccttgagttctttgaagctctggtaga
ctgtgcccttctttatgtcacggacgagatgttgaagcagcaggctgaagaggttacccaagaagtgacagcttcttaca
ggccagatgtgctgccagaacggagtgaaactgcctctttgcctccggaattgtcttctcctcagaaaggcaaaagcaaa
gaagggaagaaagaggagaaatcccacaaaggaaagtcccacggcaaagaaaaaactgcctctcctcaaagcataactgt
gaatgtcgtgttttctcccatcccggaagacaaagaggcaaccattgaacctcttccggttttaggggatctggataaaa
ttcccttgaaggaattagcagaaaagctcgaaaaagagaaaaatgaggaaaaagataagctcaacctctggatgagtcag
atgtacattttttttgtcaaaaagttttttgccaactacaagaacttgcagttggtgaacgaaaccatcgaagataacag
agcccgagaagccgaactctcaatcttgcggaagaaagaagaagaggaagaagaggccaagctccaggctatgaaggagg
ccgaagaggcccgaaaattagaagaagcggcagcggaaaaagcagccttagaactagaggagagtttgaatcgagaaatg
gaggaaagtctgagccagctccaatctcctccgaaggaagaatctcctacttcgcttcagagtgtgcccggtaccaaggc
agccgtagtggggaaaaagaagaaaaagtgagaagagctgcacagccaccagtaaagtaagttacacaatgacagacaga
gacaaggaaggaaggacacaggtttcattctgaccaattttaataaatttgaacataaatattttaaaa
Transcript IDhabu1_s105_g00546.t2
Definition-
>habu1_s105_g00546.t2
tcgcagagaaacttcaggccgtttttgcgaagggttgcaaaatagcagggatttccaaagagttcaaaataggagctcca
gtctttgcaaggacgcctcattctgccctacaacggagcgatgggtaaagataagaagaaagacagcaaaaagggagaga
aggccgcatctgctccagcccacgacacctccatcgagttagcagtctccaaccagaatgtcccacctctggcagaccaa
ggggacgagcactcggctactcggataacttccaaagaagaaaacaaagatctagagcttcctcttgtccctgaacccat
tgagtatgaagaacccatcctcacccaactgattgttgaaagttacgagggagaaaagatccgtggattatacgaagggg
aaggaacggcctattttcaaggaggcaacatctacaagggaatgttttcggaaggactcatgcacgggcgagggacttac
acatggactgatggggtgcagtacgagggaaacttcgtcaagaacgtgcaaatggatcgtggcacttacaagtggccaga
cggcagcctgtacgaaggcgaagtgaagaacgggatcagacatggctttggcatgtacaaatgtggcacctatcccgttt
cgtacatcggccactgggtggaaggcaagagacatggaaagggtaccatttactacaatgaaccgggttcttcttggtac
gaaggagactttgtgaacaatgtaaaaagtggatggggaataagatgttacaaatctggaaatatctacgaagggcagtg
ggagagagacctgcgccatggagaaggacggatgaggtggctaacatctaaccaggaatatactgggaactgggttaatg
gcatacagcacggccagggtacccatacctggtatctgaagaggatagctgggtcacagtatcccctgaggaatgagtac
gttggagacttcgtcaacggcgaccggcacggacacggaaaattcttctttgccagtggtgccatgtacgatggagaatg
ggtgctgaacaaaaagcatggcaagggcaagctagtcttcaagaacggccgggtgtacgaaggcgactttaactacgatc
acatagcggagtgtccgtccttgcaaattgacatgaccaacatggaagagctgagcaaccttcctctgaagggtttttct
ggcatagatagtgtcaaagttgtggatcattcaaggagttcctcttcgtcgggaccaaacattgaaatagatctatcaac
cttgttggctatatttccggaaaaagacagggaggatgaaatgaaacagaccgaatacgccgtgctgagatatatctctg
agctgaggaggatctacaccttttacagcagcctgggctatgaccactccctggacaacaccttcctgatgaccaagctt
cagttctggaggttcttgaaggactgcagatttcattactgcaaccagacactcgcctccatggaccggattctgaacga
taaaacattactggaagagattcattctccatatgagactttgctccttaggatgtttttgacctacctcatttacttgt
ccttccacatttaccacaaggattttgatgacacaagtcctcgcctgttcaagtgtttctccaagctgatggtcaagaat
atttgtcccaacgcctgccgtatcaaaggtatactgttcagtgaccgacagcaagctgtctatgtgctcagttacattga
caagtgctgggagattttccaggcgttctgtagaccaagtactctgcctccttatgaacctacaatgacgatgaggcact
tcctgtggatgttgaaagatttaagactgataaccaaacaactgacagctaccaaggttgtggacattctggctaaagac
aatccttcagtctccgatgcagagactgtcaatctggaacacgagcttgtcttccttgagttctttgaagctctggtaga
ctgtgcccttctttatgtcacggacgagatgttgaagcagcaggctgaagaggttacccaagaagtgacagcttcttaca
ggccagatgtgctgccagaacggagtgaaactgcctctttgcctccggaattgtcttctcctcagtccgttcatactaga
agcaccagcagtgatgaagccagcactgaaggcacagatgtcaccaccgcccaagttggccccaaatattcctcaagcaa
gattgtgcatttcgtggaaatgggcaagaccaagaaatctgaaggccataaaaagggaagtcatagtggtagcatcccat
ttccttggcaaggcaaaagcaaagaagggaagaaagaggagaaatcccacaaaggaaagtcccacggcaaagaaaaaact
gcctctcctcaaagcataactgtgaatgtcgtgttttctcccatcccggaagacaaagaggcaaccattgaacctcttcc
ggttttaggggatctggataaaattcccttgaaggaattagcagaaaagctcgaaaaagagaaaaatgaggaaaaagata
agctcaacctctggatgagtcagatgtacattttttttgtcaaaaagttttttgccaactacaagaacttgcagttggtg
aacgaaaccatcgaagataacagagcccgagaagccgaactctcaatcttgcggaagaaagaagaagaggaagaagaggc
caagctccaggctatgaaggaggccgaagaggcccgaaaattagaagaagcggcagcggaaaaagcagccttagaactag
aggagagtttgaatcgagaaatggaggaaagtctgagccagctccaatctcctccgaaggaagaatctcctacttcgctt
cagagtgtgcccggtaccaaggcagccgtagtggggaaaaagaagaaaaagtgagaagagctgcacagccaccagtaaag
taagttacacaatgacagacagagacaaggaaggaaggacacaggtttcattctgaccaattttaataaatttgaacata
aatattttaaaa
Transcript IDhabu1_s105_g00546.t3
Definition-
>habu1_s105_g00546.t3
tcgcagagaaacttcaggccgtttttgcgaagggttgcaaaatagcagggatttccaaagagttcaaaataggagctcca
gtctttgcaaggacgcctcattctgccctacaacggagcgatgggtaaagataagaagaaagacagcaaaaagggagaga
aggccgcatctgctccagcccacgacacctccatcgagttagcagtctccaaccagaatgtcccacctctggcagaccaa
ggggacgagcactcggctactcggataacttccaaagaagaaaacaaagatctagagcttcctcttgtccctgaacccat
tgagtatgaagaacccatcctcacccaactgattgttgaaagttacgagggagaaaagatccgtggattatacgaagggg
aaggaacggcctattttcaaggaggcaacatctacaagggaatgttttcggaaggactcatgcacgggcgagggacttac
acatggactgatggggtgcagtacgagggaaacttcgtcaagaacgtgcaaatggatcgtggcacttacaagtggccaga
cggcagcctgtacgaaggcgaagtgaagaacgggatcagacatggctttggcatgtacaaatgtggcacctatcccgttt
cgtacatcggccactgggtggaaggcaagagacatggaaagggtaccatttactacaatgaaccgggttcttcttggtac
gaaggagactttgtgaacaatgtaaaaagtggatggggaataagatgttacaaatctggaaatatctacgaagggcagtg
ggagagagacctgcgccatggagaaggacggatgaggtggctaacatctaaccaggaatatactgggaactgggttaatg
gcatacagcacggccagggtacccatacctggtatctgaagaggatagctgggtcacagtatcccctgaggaatgagtac
gttggagacttcgtcaacggcgaccggcacggacacggaaaattcttctttgccagtggtgccatgtacgatggagaatg
ggtgctgaacaaaaagcatggcaagggcaagctagtcttcaagaacggccgggtgtacgaaggcgactttaactacgatc
acatagcggagtgtccgtccttgcaaattgacatgaccaacatggaagagctgagcaaccttcctctgaagggtttttct
ggcatagatagtgtcaaagttgtggatcattcaaggagttcctcttcgtcgggaccaaacattgaaatagatctatcaac
cttgttggctatatttccggaaaaagacagggaggatgaaatgaaacagaccgaatacgccgtgctgagatatatctctg
agctgaggaggatctacaccttttacagcagcctgggctatgaccactccctggacaacaccttcctgatgaccaagctt
cagttctggaggttcttgaaggactgcagatttcattactgcaaccagacactcgcctccatggaccggattctgaacga
taaaacattactggaagagattcattctccatatgagactttgctccttaggatgtttttgacctacctcatttacttgt
ccttccacatttaccacaaggattttgatgacacaagtcctcgcctgttcaagtgtttctccaagctgatggtcaagaat
atttgtcccaacgcctgccgtatcaaagggccacacttggaatacggcatccagttttggtcaccacgatgtaaaaaaga
ggttgagactctagaaagagtacagagaagagcaacaaagatgatcaggggactggaggctaaaacatatcaagaaccgt
tgctggaattgggtatactgttcagtgaccgacagcaagctgtctatgtgctcagttacattgacaagtgctgggagatt
ttccaggcgttctgtagaccaagtactctgcctccttatgaacctacaatgacgatgaggcacttcctgtggatgttgaa
agatttaagactgataaccaaacaactgacagctaccaaggttgtggacattctggctaaagacaatccttcagtctccg
atgcagagactgtcaatctggaacacgagcttgtcttccttgagttctttgaagctctggtagactgtgcccttctttat
gtcacggacgagatgttgaagcagcaggctgaagaggttacccaagaagtgacagcttcttacaggccagatgtgctgcc
agaacggagtgaaactgcctctttgcctccggaattgtcttctcctcagtccgttcatactagaagcaccagcagtgatg
aagccagcactgaaggcacagatgtcaccaccgcccaagttggccccaaatattcctcaagcaagattgtgcatttcgtg
gaaatgggcaagaccaagaaatctgaaggccataaaaagggaagtcatagtggtagcatcccatttccttggcaaggcaa
aagcaaagaagggaagaaagaggagaaatcccacaaaggaaagtcccacggcaaagaaaaaactgcctctcctcaaagca
taactgtgaatgtcgtgttttctcccatcccggaagacaaagaggcaaccattgaacctcttccggttttaggggatctg
gataaaattcccttgaaggaattagcagaaaagctcgaaaaagagaaaaatgaggaaaaagataagctcaacctctggat
gagtcagatgtacattttttttgtcaaaaagttttttgccaactacaagaacttgcagttggtgaacgaaaccatcgaag
ataacagagcccgagaagccgaactctcaatcttgcggaagaaagaagaagaggaagaagaggccaagctccaggctatg
aaggaggccgaagaggcccgaaaattagaagaagcggcagcggaaaaagcagccttagaactagaggagagtttgaatcg
agaaatggaggaaagtctgagccagctccaatctcctccgaaggaagaatctcctacttcgcttcagagtgtgcccggta
ccaaggcagccgtagtggggaaaaagaagaaaaagtgagaagagctgcacagccaccagtaaagtaagttacacaatgac
agacagagacaaggaaggaaggacacaggtttcattctgaccaattttaataaatttgaacataaatattttaaaa

Protein
Protein IDhabu1_s105_g00546.t1
Definition-
>habu1_s105_g00546.t1
MGKDKKKDSKKGEKAASAPAHDTSIELAVSNQNVPPLADQGDEHSATRITSKEENKDLELPLVPEPIEYEEPILTQLIVE
SYEGEKIRGLYEGEGTAYFQGGNIYKGMFSEGLMHGRGTYTWTDGVQYEGNFVKNVQMDRGTYKWPDGSLYEGEVKNGIR
HGFGMYKCGTYPVSYIGHWVEGKRHGKGTIYYNEPGSSWYEGDFVNNVKSGWGIRCYKSGNIYEGQWERDLRHGEGRMRW
LTSNQEYTGNWVNGIQHGQGTHTWYLKRIAGSQYPLRNEYVGDFVNGDRHGHGKFFFASGAMYDGEWVLNKKHGKGKLVF
KNGRVYEGDFNYDHIAECPSLQIDMTNMEELSNLPLKGFSGIDSVKVVDHSRSSSSSGPNIEIDLSTLLAIFPEKDREDE
MKQTEYAVLRYISELRRIYTFYSSLGYDHSLDNTFLMTKLQFWRFLKDCRFHYCNQTLASMDRILNDKTLLEEIHSPYET
LLLRMFLTYLIYLSFHIYHKDFDDTSPRLFKCFSKLMVKNICPNACRIKGILFSDRQQAVYVLSYIDKCWEIFQAFCRPS
TLPPYEPTMTMRHFLWMLKDLRLITKQLTATKVVDILAKDNPSVSDAETVNLEHELVFLEFFEALVDCALLYVTDEMLKQ
QAEEVTQEVTASYRPDVLPERSETASLPPELSSPQKGKSKEGKKEEKSHKGKSHGKEKTASPQSITVNVVFSPIPEDKEA
TIEPLPVLGDLDKIPLKELAEKLEKEKNEEKDKLNLWMSQMYIFFVKKFFANYKNLQLVNETIEDNRAREAELSILRKKE
EEEEEAKLQAMKEAEEARKLEEAAAEKAALELEESLNREMEESLSQLQSPPKEESPTSLQSVPGTKAAVVGKKKKK
Protein IDhabu1_s105_g00546.t2
Definition-
>habu1_s105_g00546.t2
MGKDKKKDSKKGEKAASAPAHDTSIELAVSNQNVPPLADQGDEHSATRITSKEENKDLELPLVPEPIEYEEPILTQLIVE
SYEGEKIRGLYEGEGTAYFQGGNIYKGMFSEGLMHGRGTYTWTDGVQYEGNFVKNVQMDRGTYKWPDGSLYEGEVKNGIR
HGFGMYKCGTYPVSYIGHWVEGKRHGKGTIYYNEPGSSWYEGDFVNNVKSGWGIRCYKSGNIYEGQWERDLRHGEGRMRW
LTSNQEYTGNWVNGIQHGQGTHTWYLKRIAGSQYPLRNEYVGDFVNGDRHGHGKFFFASGAMYDGEWVLNKKHGKGKLVF
KNGRVYEGDFNYDHIAECPSLQIDMTNMEELSNLPLKGFSGIDSVKVVDHSRSSSSSGPNIEIDLSTLLAIFPEKDREDE
MKQTEYAVLRYISELRRIYTFYSSLGYDHSLDNTFLMTKLQFWRFLKDCRFHYCNQTLASMDRILNDKTLLEEIHSPYET
LLLRMFLTYLIYLSFHIYHKDFDDTSPRLFKCFSKLMVKNICPNACRIKGILFSDRQQAVYVLSYIDKCWEIFQAFCRPS
TLPPYEPTMTMRHFLWMLKDLRLITKQLTATKVVDILAKDNPSVSDAETVNLEHELVFLEFFEALVDCALLYVTDEMLKQ
QAEEVTQEVTASYRPDVLPERSETASLPPELSSPQSVHTRSTSSDEASTEGTDVTTAQVGPKYSSSKIVHFVEMGKTKKS
EGHKKGSHSGSIPFPWQGKSKEGKKEEKSHKGKSHGKEKTASPQSITVNVVFSPIPEDKEATIEPLPVLGDLDKIPLKEL
AEKLEKEKNEEKDKLNLWMSQMYIFFVKKFFANYKNLQLVNETIEDNRAREAELSILRKKEEEEEEAKLQAMKEAEEARK
LEEAAAEKAALELEESLNREMEESLSQLQSPPKEESPTSLQSVPGTKAAVVGKKKKK
Protein IDhabu1_s105_g00546.t3
Definition-
>habu1_s105_g00546.t3
MGKDKKKDSKKGEKAASAPAHDTSIELAVSNQNVPPLADQGDEHSATRITSKEENKDLELPLVPEPIEYEEPILTQLIVE
SYEGEKIRGLYEGEGTAYFQGGNIYKGMFSEGLMHGRGTYTWTDGVQYEGNFVKNVQMDRGTYKWPDGSLYEGEVKNGIR
HGFGMYKCGTYPVSYIGHWVEGKRHGKGTIYYNEPGSSWYEGDFVNNVKSGWGIRCYKSGNIYEGQWERDLRHGEGRMRW
LTSNQEYTGNWVNGIQHGQGTHTWYLKRIAGSQYPLRNEYVGDFVNGDRHGHGKFFFASGAMYDGEWVLNKKHGKGKLVF
KNGRVYEGDFNYDHIAECPSLQIDMTNMEELSNLPLKGFSGIDSVKVVDHSRSSSSSGPNIEIDLSTLLAIFPEKDREDE
MKQTEYAVLRYISELRRIYTFYSSLGYDHSLDNTFLMTKLQFWRFLKDCRFHYCNQTLASMDRILNDKTLLEEIHSPYET
LLLRMFLTYLIYLSFHIYHKDFDDTSPRLFKCFSKLMVKNICPNACRIKGPHLEYGIQFWSPRCKKEVETLERVQRRATK
MIRGLEAKTYQEPLLELGILFSDRQQAVYVLSYIDKCWEIFQAFCRPSTLPPYEPTMTMRHFLWMLKDLRLITKQLTATK
VVDILAKDNPSVSDAETVNLEHELVFLEFFEALVDCALLYVTDEMLKQQAEEVTQEVTASYRPDVLPERSETASLPPELS
SPQSVHTRSTSSDEASTEGTDVTTAQVGPKYSSSKIVHFVEMGKTKKSEGHKKGSHSGSIPFPWQGKSKEGKKEEKSHKG
KSHGKEKTASPQSITVNVVFSPIPEDKEATIEPLPVLGDLDKIPLKELAEKLEKEKNEEKDKLNLWMSQMYIFFVKKFFA
NYKNLQLVNETIEDNRAREAELSILRKKEEEEEEAKLQAMKEAEEARKLEEAAAEKAALELEESLNREMEESLSQLQSPP
KEESPTSLQSVPGTKAAVVGKKKKK

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