Gene
| Gene Model ID | habu1_s10768_g20189 |
|---|---|
| Locus | habu1_scaffold10768 : 216 ... 36314 : + |
| To GenomeBrowser | habu1_scaffold10768:216..36314 |
| Genes list of scaffold | habu1_scaffold10768 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s10768_g20189.t2 | 4 | 1 | dsrm | 81 | 143 | 0.0 | 171.3 | 4.8e-16 | 1.8e-12 | 47.6 |
| habu1_s10768_g20189.t2 | 4 | 2 | dsrm | 204 | 254 | 0.0 | 171.3 | 1.4e-10 | 5.3e-07 | 30.1 |
| habu1_s10768_g20189.t2 | 4 | 3 | dsrm | 280 | 343 | 0.0 | 171.3 | 1.8e-15 | 6.8e-12 | 45.7 |
| habu1_s10768_g20189.t2 | 4 | 4 | dsrm | 379 | 444 | 0.0 | 171.3 | 5.2e-15 | 1.9e-11 | 44.3 |
| habu1_s10768_g20189.t2 | 1 | 1 | DND1_DSRM | 379 | 445 | 2.0e-09 | 37.5 | 9.2e-07 | 0.0034 | 17.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s10768_g20189.t2 | gi|327271788|ref|XP_003220669.1| | PREDICTED: double-stranded RNA-binding protein Staufen homolog 1 isoform X2 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 35.0 |
| Venom grand-1 | 51.7 |
| Pit, infrared sensing | 48.8 |
| Nose | 31.7 |
| Brain-1 | 142.0 |
| Eye | 50.9 |
| fetal fibroblast | 95.7 |
| venom gland-2 | 54.1 |
| Brain-2 | 148.1 |
| Spleen | 24.4 |
| Lung | 16.8 |
| Liver | 40.3 |
| Kidney | 69.5 |
| Pancreas | 21.8 |
| Small intestine | 25.6 |
| Large intestine | 23.5 |
| Stomach | 36.9 |
| heart | 113.5 |
| ovary | 50.3 |
| cheek muscle | 400.8 |
Transcript
| Transcript ID | habu1_s10768_g20189.t1 |
|---|---|
| Definition | - |
>habu1_s10768_g20189.t1 ttccctgcctgccttttcctcgtggccctcgatgtgggaaacccagcgcgtcgtgtgggctctgtggaaaaagaagccgt ggactgtggagggtctgaggtagcgcagctctccacggcatcctagtgatcggtttgggttagagtcccattctgggaga ggcaatttccatcatataaatattatccttggaactaacacccaaagtaaactgtcccaggaacaccaaaaggtacaaat tcaagcacttatacagaaaaaacctgcgttcaaggccaagtttacctgcactgattagatttggatggaaataaatatgt ctcaagttcaaatacagaatccatctgctactctttctagcagccaaatactaaacaagaaccaatctctcgcacagcct ttgagtattccttctcccactagttctttgccctctgaaaatgcgggtagacctattcaaaattctgctttaccctctgc atctgttacatctactagtgttgctgcagtttcttctaacatggcaaaccccaaagagaaaacacccatgtgtcttgtga atgagttagcccgtttcaacaagattcagcctgaatataagcttttgagtgagcagggtccagctcactcgaaggtgttt acagtgcagctgactcttggggaccagcattgggaagctgaaggaactagtattaagaaagctcaacatgcagctgctgc caaagctttggaagggacaagatttcctaaacctacagctcgcccatctcgcaatgaaggaaagaatccagatagtgtaa cccccacagtggagctgaatgcgctttgtatgaaactgggaaagaaacctatgtacaaacctatagatccttatacagag atgaggtccacctacaactacaatatgagaggcggtgcttatcccccacggtacttctatccatttcctgtaggaccatg gctctatcaagtagagctttctatagggggacagcagtttcatgggaaaggtagaacacgacaggctgctaagcatgatg cagctgctaaagcactgaaaatcctgcaaaacgagcccctgcctgagaaaccagagataaatgggagagaaccagatgat gaaaatctcaataaatctgaaataagccaagtgtttgagattgcacttaaaaggaacttgcctgtgaattttgagttttt acctctgaaacaggtgacccgggagagcggtcccccgcatatgaagagctttgtaacaaaggtatctgtgggcgagttca tgggtgaaggtgaaggcaagagcaagaagatttcaaaaaagaatgcagctattgcagtcctagaggagttgaagaagctg cctccccttcctacagttgagaaaatgaagccacgaatcaaaaagaaaacgaaaacaatagtcaagacgagtcctgaata cggtcaaggtatgaatcctattagccgactggctcaaatacaacaagcaaagaaagagaaagagccagagtacatgctca tcacagagcgtgggttgccaaggcgtcgggagttcgttatgcaggtgaaagttggcatgcacacagctgaaggaatggga actaacaagaaagtagccaaacgcaatgcagctgaaaacatgctggagctcttaggatttaaagtcccccaaccacaacc tccaaagccagcactaaagacagaagaaaagacgccagtaaaaaagccaggtgatggaaggaaagtaactttttttgaac ctgggtctgaagaaacatctagtagtaataaagaggatgagtttaggatgccttatctcagccatcagcagcttcctgct ggcattcttcccatggtccctgaagttgcacaggctgtaggagtcaatcaaggacatcacaccaaagagttcagtagagc agcccccaatcctgccaaggctacagtgacagccatgattgcaagagagctgttatatggtggcacttctcctactgctg aaaccattataaaaaacagttcgttgggccatgttccccatgggcctctcacgagaccctctgaacagttggattacctt tcgggtgttcagggaatccaggtggagtacaaagattttcccaaaaacaacaagaatgaattcgtgtctcttataaattg ttcctctcagccacccctgatcagtcatggaattggaaaagatgttgaatcttgccatgatatggctgcattaaacatct taaaattgctgtctgagttggaccaacaaagtacagagatgccaagaacaggaaatggaccaatgtctgtatgcgtgaag caagaaatggaaagtgaccctctcctcaaaccggctagctcaaacactttgggacaaacactggacaccactgcctaaac aggcttgactggacccaaacctgaaagcaccagagaaaatcaaatgcttcctaataatgtaacctaactgttttagagtg ctacagttgttacaacccactgtagtgtctaaatcataaccgttgcttttcaaacagtgataaaatttttagtttcattg cattgttttgaatgacactataaatttttcatttaaaagtttcttg |
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| Transcript ID | habu1_s10768_g20189.t2 |
| Definition | - |
>habu1_s10768_g20189.t2 ttccctgcctgccttttcctcgtggccctcgatgtgggaaacccagcgcgtcgtgtgggctctgtggaaaaagaagccgt ggactgtggagggtctgaggtagcgcagctctccacggcatcctagtgatcggtttgggttagagtcccattctgggaga ggcaatttccatcatataaatattatccttggaactaacacccaaagtaaactgtcccaggaacaccaaaaggtacaaat tcaagcacttatacagaaaaaacctgcgttcaaggccaagtttacctgcactgattagatttggatggaaataaatatgt ctcaagttcaaatacagaatccatctgctactctttctagcagccaaatactaaacaagaaccaatctctcgcacagcct ttgagtattccttctcccactagttctttgccctctgaaaatgcgggtagacctattcaaaattctgctttaccctctgc atctgttacatctactagtgttgctgcagtttcttctaacatggcaaaccccaaagagaaaacacccatgtgtcttgtga atgagttagcccgtttcaacaagattcagcctgaatataagcttttgagtgagcagggtccagctcactcgaaggtgttt acagtgcagctgactcttggggaccagcattgggaagctgaaggaactagtattaagaaagctcaacatgcagctgctgc caaagctttggaagggacaagatttcctaaacctacagctcgcccatctcgcaatgaaggaaagaatccagatagtgtaa cccccacagtggagctgaatgcgctttgtatgaaactgggaaagaaacctatgtacaaacctatagatccttatacagag atgaggtccacctacaactacaatatgagaggcggtgcttatcccccacggtacttctatccatttcctgtaggaccatg gctctatcaagtagagctttctatagggggacagcagtttcatgggaaaggtagaacacgacaggctgctaagcatgatg cagctgctaaagcactgaaaatcctgcaaaacgagcccctgcctgagaaaccagagataaatgggagagaaccagatgat gaaaatctcaataaatctgaaataagccaagtgtttgagattgcacttaaaaggaacttgcctgtgaattttgaggtgac ccgggagagcggtcccccgcatatgaagagctttgtaacaaaggtatctgtgggcgagttcatgggtgaaggtgaaggca agagcaagaagatttcaaaaaagaatgcagctattgcagtcctagaggagttgaagaagctgcctccccttcctacagtt gagaaaatgaagccacgaatcaaaaagaaaacgaaaacaatagtcaagacgagtcctgaatacggtcaaggtatgaatcc tattagccgactggctcaaatacaacaagcaaagaaagagaaagagccagagtacatgctcatcacagagcgtgggttgc caaggcgtcgggagttcgttatgcaggtgaaagttggcatgcacacagctgaaggaatgggaactaacaagaaagtagcc aaacgcaatgcagctgaaaacatgctggagctcttaggatttaaagtcccccaaccacaacctccaaagccagcactaaa gacagaagaaaagacgccagtaaaaaagccaggtgatggaaggaaagtaactttttttgaacctgggtctgaagaaacat ctagtagtaataaagaggatgagtttaggatgccttatctcagccatcagcagcttcctgctggcattcttcccatggtc cctgaagttgcacaggctgtaggagtcaatcaaggacatcacaccaaagagttcagtagagcagcccccaatcctgccaa ggctacagtgacagccatgattgcaagagagctgttatatggtggcacttctcctactgctgaaaccattataaaaaaca gttcgttgggccatgttccccatgggcctctcacgagaccctctgaacagttggattacctttcgggtgttcagggaatc caggtggagtacaaagattttcccaaaaacaacaagaatgaattcgtgtctcttataaattgttcctctcagccacccct gatcagtcatggaattggaaaagatgttgaatcttgccatgatatggctgcattaaacatcttaaaattgctgtctgagt tggaccaacaaagtacagagatgccaagaacaggaaatggaccaatgtctgtatgcgtgaagcaagaaatggaaagtgac cctctcctcaaaccggctagctcaaacactttgggacaaacactggacaccactgcctaaacaggcttgactggacccaa acctgaaagcaccagagaaaatcaaatgcttcctaataatgtaacctaactgttttagagtgctacagttgttacaaccc actgtagtgtctaaatcataaccgttgcttttcaaacagtgataaaatttttagtttcattgcattgttttgaatgacac tataaatttttcatttaaaagtttcttg |
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Protein
| Protein ID | habu1_s10768_g20189.t1 |
|---|---|
| Definition | - |
>habu1_s10768_g20189.t1 MEINMSQVQIQNPSATLSSSQILNKNQSLAQPLSIPSPTSSLPSENAGRPIQNSALPSASVTSTSVAAVSSNMANPKEKT PMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWEAEGTSIKKAQHAAAAKALEGTRFPKPTARPSRNEGK NPDSVTPTVELNALCMKLGKKPMYKPIDPYTEMRSTYNYNMRGGAYPPRYFYPFPVGPWLYQVELSIGGQQFHGKGRTRQ AAKHDAAAKALKILQNEPLPEKPEINGREPDDENLNKSEISQVFEIALKRNLPVNFEFLPLKQVTRESGPPHMKSFVTKV SVGEFMGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKPRIKKKTKTIVKTSPEYGQGMNPISRLAQIQQAKKEKE PEYMLITERGLPRRREFVMQVKVGMHTAEGMGTNKKVAKRNAAENMLELLGFKVPQPQPPKPALKTEEKTPVKKPGDGRK VTFFEPGSEETSSSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVNQGHHTKEFSRAAPNPAKATVTAMIARELLYGG TSPTAETIIKNSSLGHVPHGPLTRPSEQLDYLSGVQGIQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDM AALNILKLLSELDQQSTEMPRTGNGPMSVCVKQEMESDPLLKPASSNTLGQTLDTTA |
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| Protein ID | habu1_s10768_g20189.t2 |
| Definition | - |
>habu1_s10768_g20189.t2 MEINMSQVQIQNPSATLSSSQILNKNQSLAQPLSIPSPTSSLPSENAGRPIQNSALPSASVTSTSVAAVSSNMANPKEKT PMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWEAEGTSIKKAQHAAAAKALEGTRFPKPTARPSRNEGK NPDSVTPTVELNALCMKLGKKPMYKPIDPYTEMRSTYNYNMRGGAYPPRYFYPFPVGPWLYQVELSIGGQQFHGKGRTRQ AAKHDAAAKALKILQNEPLPEKPEINGREPDDENLNKSEISQVFEIALKRNLPVNFEVTRESGPPHMKSFVTKVSVGEFM GEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKPRIKKKTKTIVKTSPEYGQGMNPISRLAQIQQAKKEKEPEYMLI TERGLPRRREFVMQVKVGMHTAEGMGTNKKVAKRNAAENMLELLGFKVPQPQPPKPALKTEEKTPVKKPGDGRKVTFFEP GSEETSSSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVNQGHHTKEFSRAAPNPAKATVTAMIARELLYGGTSPTAE TIIKNSSLGHVPHGPLTRPSEQLDYLSGVQGIQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNIL KLLSELDQQSTEMPRTGNGPMSVCVKQEMESDPLLKPASSNTLGQTLDTTA |
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