Gene
| Gene Model ID | habu1_s10768_g20190 |
|---|---|
| Locus | habu1_scaffold10768 : 69196 ... 75613 : + |
| To GenomeBrowser | habu1_scaffold10768:69196..75613 |
| Genes list of scaffold | habu1_scaffold10768 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| somatomedin-b and thrombospondin type-1 domain-containing | GO:0005044 GO:0006898 GO:0006955 GO:0007165 GO:0030247 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s10768_g20190.t1 | gi|327271838|ref|XP_003220694.1| | PREDICTED: somatomedin-B and thrombospondin type-1 domain-containing protein-like [Anolis carolinensis] | 0.0 |
| habu1_s10768_g20190.t1 | gi|558204635|ref|XP_006132323.1| | PREDICTED: somatomedin-B and thrombospondin type-1 domain-containing protein-like [Pelodiscus sinensis] | 0.0 |
| habu1_s10768_g20190.t1 | gi|699581323|ref|XP_009862956.1| | PREDICTED: somatomedin-B and thrombospondin type-1 domain-containing protein-like, partial [Apaloderma vittatum] | 0.0 |
| habu1_s10768_g20190.t1 | gi|591370148|ref|XP_007059902.1| | PREDICTED: somatomedin-B and thrombospondin type-1 domain-containing protein-like [Chelonia mydas] | 0.0 |
| habu1_s10768_g20190.t1 | gi|641773240|ref|XP_008170361.1| | PREDICTED: somatomedin-B and thrombospondin type-1 domain-containing protein-like [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.0 |
| Venom grand-1 | 1.0 |
| Pit, infrared sensing | 1.2 |
| Nose | 1.7 |
| Brain-1 | 0.9 |
| Eye | 2.1 |
| fetal fibroblast | 2.0 |
| venom gland-2 | 0.2 |
| Brain-2 | 1.4 |
| Spleen | 2.1 |
| Lung | 4.5 |
| Liver | 0.8 |
| Kidney | 0.5 |
| Pancreas | 4.1 |
| Small intestine | 2.6 |
| Large intestine | 5.3 |
| Stomach | 4.0 |
| heart | 0.8 |
| ovary | 12.7 |
| cheek muscle | 17.3 |
Transcript
| Transcript ID | habu1_s10768_g20190.t1 |
|---|---|
| Definition | - |
>habu1_s10768_g20190.t1 caaccggtcgtaagtcgaggactttccctgcccgggagcaccgctcatgcgtggttccgccccctgcaccggccgaggca tagctggcaagcggcagagacggagcaggccgaccaccagctggcccagctcaagggaggtaaggcacccgccggaaaag gggaaaaaaatggcggacaaaaaaatggcggacagccttgcttggcgacccccatgaaatggtcgatcaaccccaaatgg ggtcccgacccacaggttaagaaccactgccttagctggtccaaataggtacggctatatgagaaacaataaaaaatgct tttttccaggtctgtgttaaaaaggttaaattagttaaggtgaactattttttccttaaaaaaacaaaacacggttgaga tccaagtaaaatttatggactggtgatcaattcaaatggattgtatttctaccgaactatggtggattattaaaataact cccttccttctagaaggataataagtaggcctgctccaaaaagaaagaaaagggatgaagatttcccgattctacagttg atgaataattatttgtgatcaggaactgtgggagaaaatgtatctttggtttcccacttgcgaacaaaaacaaggcatta aactccatgagcatcccaggcttggttattctgctgatgtaagtgagttttagagtgcagttttcactgactgtggttgt tgtggtttttattcctccccttcatgtaatcagtcccagcattaataactactggaggctatgggaaggcaaggagaaag cgtgctgtgctcagcgggagacaaagaattgggtattgtgttgagttccagctcatggccatcacaaaaggctgcctgaa tgggaacagttcctacactcattggatgaagtatctcagtgaaggacacacagtgtgtgtggaatgtcaacatccagccc tagatcagaagagtctacactgctctggggatgggagcggagccaagaagaaccagctactgtactggcaggctgtgggg aatccgagatgtagaggaacctggaagagggttcgccagcgggatacttgcacttgtccttcagttcacagcttcttgtt catctgacttccatatattgccaccaacattgatttctgcactactgtagtcctcatttacagaaattcagggaataaga tgcaacctgctgcatgaacttttcaacattctgccaatgtctgaagccctacctctcatcccaatattttatatttcaaa gtatattgaatagcagagtttaaagaggaaccactgcaagggagacccaggattgtaaggttttgatctgaaggcagact cggttgaatacagatggataaccttgtcaatgct |
|
Protein
| Protein ID | habu1_s10768_g20190.t1 |
|---|---|
| Definition | - |
>habu1_s10768_g20190.t1 MAITKGCLNGNSSYTHWMKYLSEGHTVCVECQHPALDQKSLHCSGDGSGAKKNQLLYWQAVGNPRCRGTWKRVRQRDTCT CPSVHSFLFI |
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