Gene
| Gene Model ID | habu1_s1085_g03789 |
|---|---|
| Locus | habu1_scaffold1085 : 97944 ... 138275 : - |
| To GenomeBrowser | habu1_scaffold1085:97944..138275 |
| Genes list of scaffold | habu1_scaffold1085 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| prolyl 4-hydroxylase subunit alpha-2 isoform x1 | EC:1.13.11.0 EC:1.14.11.2 GO:0004656 GO:0005506 GO:0005634 GO:0006525 GO:0006560 GO:0016222 GO:0016702 GO:0018401 GO:0031418 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1085_g03789.t4 | 1 | 1 | P4Ha_N | 1 | 128 | 4.5e-40 | 136.5 | 2.10195e-43 | 4.5e-40 | 136.5 |
| habu1_s1085_g03789.t4 | 1 | 1 | 2OG-FeII_Oxy | 387 | 513 | 3.8e-11 | 43.1 | 6.0e-14 | 1.3e-10 | 41.4 |
| habu1_s1085_g03789.t4 | 1 | 1 | 2OG-FeII_Oxy_3 | 391 | 512 | 1.1e-06 | 29.1 | 8.4e-09 | 1.8e-05 | 25.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1085_g03789.t4 | gi|641792546|ref|XP_008177648.1| | PREDICTED: prolyl 4-hydroxylase subunit alpha-2 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 27.9 |
| Venom grand-1 | 45.5 |
| Pit, infrared sensing | 25.9 |
| Nose | 16.4 |
| Brain-1 | 7.2 |
| Eye | 12.1 |
| fetal fibroblast | 69.2 |
| venom gland-2 | 94.1 |
| Brain-2 | 5.2 |
| Spleen | 17.6 |
| Lung | 23.8 |
| Liver | 39.9 |
| Kidney | 9.5 |
| Pancreas | 10.9 |
| Small intestine | 25.8 |
| Large intestine | 23.7 |
| Stomach | 18.1 |
| heart | 15.8 |
| ovary | 51.1 |
| cheek muscle | 22.8 |
Transcript
| Transcript ID | habu1_s1085_g03789.t1 |
|---|---|
| Definition | - |
>habu1_s1085_g03789.t1 ggggttgggggacccctgccctagcactattctcaaacaaagattctctttcagatgcttactctgaatcagtattttgc acagggcatcagacacaatcagagacaaaccctcataaatgcagactagggttctgtgaagcattcaaagaatgtaccac aaggctcattggtgttaaaacaattttattttctgaaaacttggctttcatacttctaaggctttttatgactgcacaca tatatattccattgattgaagatggcacaatggattatgttattactgttgacctgtctggggtgcataaaaggagaatt tttcacttctataggtgagacacaagaggcatattacaagtcccgtctgctaaggagttttatctgacagaccaaggaga agagttttttctgcagtacagtagcatctgccatattggaacatcattctctctgaggccagatgacagacctgatttat gcggaaaaagatctggtacagtcattaaaagcatatattcaggaggaagaaaccaaactttctaaaataaaaagctgggc tgagacaatggaatccttaacagtcaaatccacctctgatccagaaggttatcttgctcatcctgtcaatgcctataaat tagtaaagcgcctcaacaaagaatggctggagctggagaatctagttcttgaggacatgaccaagggctttattacaaat ctgacggttcagcgtcagtttttcccaaatgaagaagatgagactggagctgccaaggcattaatgcgtttgcaggacac atacaagctggattctgaaacaatatcaaagggagaatttccaggcacaaagtaccgatctaccttgacagtggatgact gttttggtatggggaaaacagcttacagtgatggagattattatcacacagtgctgtggatgcagcaggccctaaaacaa catgataatggtgaacagacaaccatcagtaaagctgacatcttggattacctcagctatgctgtttttcagctcgggga tttacagagagcaatagagcttacaagacggttggtcatcctagacccaggtcatgagagagcaggcagcaacatgcagt actttgagaagctgctagagagtgaaaaagaaagcaaccaaatcaataaattgtcagtgaaccccagtgagcccaaaacc tacaatggcatttatgaaaggcctcaggactacctgccagagcgtgagacctatgaagccctttgcagaggggaaggcgt gaaactgacgcctcgaaggcagaagaggttgttttgcagataccacaatggaaatcgaaatcctcatttaattatagcgc cttttaaagaagaagatgaatgggacagcccacgtattgtcagatattatgaagtcctatctgatgaagaaatagagaag attaaggagttggctaaaccaaaattggcaagagctacagtccgggacccgaaaacaggtgtactaacagtagccaacta ccgggtttccaaaagttcctggctggaagaagaggacgatctggttgttgccagagtaaatcatcgaatggaacaaatta caggattaactaccaaaacagctgaattgttgcaggttgctaattatggcatgggaggacaatatgaacctcattttgac ttctcaaggaaagaggaacctgatgttttcaagcatttagggactgggaaccgtttggccacttttttgaactatatgag tgatgttgaagcaggaggtgcaacagttttcccagattttggagctgcgatttggcccaaaaaggggactgcagttttct ggtataacctctttcgaagtggagaaggtgattaccgaacgagacatgcagcatgcccagtgttagtaggctgtaaatgg gtatcaaacaaatggtttcatgagagaggaaatgaatttttaagaccatgtggtacaacagaagtggactgaaaccagcc caaccatattttccttctctgctgtcagctttctacattgttcagttcatttctaagaaatgacttctactatgaaaatg acagcattatttattgaagaaaggcaacatctcacaagaaaagaagacagctctttggacagttggtgctatgtacttat atatggttactgtcattctccttctcccttcagtttctgcaacctccagcaatgtgatatgttacagattggccatggaa cattttttttttcagaatgtatattttgaaaatgttactgtattttctaggaagtacaacatccattaaactttttaaaa agaggccacgtg |
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| Transcript ID | habu1_s1085_g03789.t2 |
| Definition | - |
>habu1_s1085_g03789.t2 ggggttgggggacccctgccctagcactattctcaaacaaagattctctttcagatgcttactctgaatcagtattttgc acagggcatcagacacaatcagagacaaaccctcataaatgcagactagggttctgtgaagcattcaaagaatgtaccac aaggctcattggtgttaaaacaattttattttctgaaaacttggctttcatacttctaaggctttttatgactgcacaca tatatattccattgattgaagatggcacaatggattatgttattactgttgacctgtctggggtgcataaaaggagaatt tttcacttctataggtgagacacaagaggcatattacaagtcccgtctgctaaggagttttatctgacagaccaaggaga agagttttttctgcagtacagtagcatctgccatattggaacatcattctctctgaggccagatgacagacctgatttat gcggaaaaagatctggtacagtcattaaaagcatatattcaggaggaagaaaccaaactttctaaaataaaaagctgggc tgagacaatggaatccttaacagtcaaatccacctctgatccagaaggttatcttgctcatcctgtcaatgcctataaat tagtaaagcgcctcaacaaagaatggctggagctggagaatctagttcttgaggacatgaccaagggctttattacaaat ctgacggttcagcgtcagtttttcccaaatgaagaagatgagactggagctgccaaggcattaatgcgtttgcaggacac atacaagctggattctgaaacaatatcaaagggagaatttccaggcacaaagtaccgatctaccttgacagtggatgact gttttggtatggggaaaacagcttacagtgatggagattattatcacacagtgctgtggatgcagcaggccctaaaacaa catgataatggtgaacagacaaccatcagtaaagctgacatcttggattacctcagctatgctgtttttcagctcgggga tttacagagagcaatagagcttacaagacggttggtcatcctagacccaggtcatgagagagcaggcagcaacatgcagt actttgagaagctgctagagagtgaaaaagaaagcaaccaaatcaataaattgtcagtgaaccccagtgagcccaaaacc tacaatggcatttatgaaaggcctcaggactacctgccagagcgtgagacctatgaagccctttgcagaggggaaggcgt gaaactgacgcctcgaaggcagaagaggttgttttgcagataccacaatggaaatcgaaatcctcatttaattatagcgc cttttaaagaagaagatgaatgggacagcccacgtattgtcagatattatgaagtcctatctgatgaagaaatagagaag attaaggagttggctaaaccaaaattggcaagagctacagtccgggacccgaaaacaggtgtactaacagtagccaacta ccgggtttccaaaagttcctggctggaagaagaggacgatctggttgttgccagagtaaatcatcgaatggaacaaatta caggattaactaccaaaacagctgaattgttgcaggttgctaattatggcatgggaggacaatatgaacctcattttgac ttctcaaggcgaccctttgacatcacactcagaacggaaggaaataggctagcaacatttcttaactatatgagtgatgt tgaagcaggaggtgcaacagttttcccagattttggagctgcgatttggcccaaaaaggggactgcagttttctggtata acctctttcgaagtggagaaggtgattaccgaacgagacatgcagcatgcccagtgttagtaggctgtaaatgggtatca aacaaatggtttcatgagagaggaaatgaatttttaagaccatgtggtacaacagaagtggactgaaaccagcccaacca tattttccttctctgctgtcagctttctacattgttcagttcatttctaagaaatgacttctactatgaaaatgacagca ttatttattgaagaaaggcaacatctcacaagaaaagaagacagctctttggacagttggtgctatgtacttatatatgg ttactgtcattctccttctcccttcagtttctgcaacctccagcaatgtgatatgttacagattggccatggaacatttt ttttttcagaatgtatattttgaaaatgttactgtattttctaggaagtacaacatccattaaactttttaaaaagaggc cacgtg |
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| Transcript ID | habu1_s1085_g03789.t3 |
| Definition | - |
>habu1_s1085_g03789.t3 ggggttgggggacccctgccctagcactattctcaaacaaagattctctttcagatgcttactctgaatcagtattttgc acagggcatcagacacaatcagagacaaaccctcataaatgcagactagggttctgtgaagcattcaaagaatgtaccac aaggctcattggtgttaaaacaattttattttctgaaaacttggctttcatacttctaaggctttttatgactgcacaca tatatattccattgattgaagatggcacaatggattatgttattactgttgacctgtctggggtgcataaaaggagaatt tttcacttctataggccagatgacagacctgatttatgcggaaaaagatctggtacagtcattaaaagcatatattcagg aggaagaaaccaaactttctaaaataaaaagctgggctgagacaatggaatccttaacagtcaaatccacctctgatcca gaaggttatcttgctcatcctgtcaatgcctataaattagtaaagcgcctcaacaaagaatggctggagctggagaatct agttcttgaggacatgaccaagggctttattacaaatctgacggttcagcgtcagtttttcccaaatgaagaagatgaga ctggagctgccaaggcattaatgcgtttgcaggacacatacaagctggattctgaaacaatatcaaagggagaatttcca ggcacaaagtaccgatctaccttgacagtggatgactgttttggtatggggaaaacagcttacagtgatggagattatta tcacacagtgctgtggatgcagcaggccctaaaacaacatgataatggtgaacagacaaccatcagtaaagctgacatct tggattacctcagctatgctgtttttcagctcggggatttacagagagcaatagagcttacaagacggttggtcatccta gacccaggtcatgagagagcaggcagcaacatgcagtactttgagaagctgctagagagtgaaaaagaaagcaaccaaat caataaattgtcagtgaaccccagtgagcccaaaacctacaatggcatttatgaaaggcctcaggactacctgccagagc gtgagacctatgaagccctttgcagaggggaaggcgtgaaactgacgcctcgaaggcagaagaggttgttttgcagatac cacaatggaaatcgaaatcctcatttaattatagcgccttttaaagaagaagatgaatgggacagcccacgtattgtcag atattatgaagtcctatctgatgaagaaatagagaagattaaggagttggctaaaccaaaattggcaagagctacagtcc gggacccgaaaacaggtgtactaacagtagccaactaccgggtttccaaaagttcctggctggaagaagaggacgatctg gttgttgccagagtaaatcatcgaatggaacaaattacaggattaactaccaaaacagctgaattgttgcaggttgctaa ttatggcatgggaggacaatatgaacctcattttgacttctcaaggcgaccctttgacatcacactcagaacggaaggaa ataggctagcaacatttcttaactatatgagtgatgttgaagcaggaggtgcaacagttttcccagattttggagctgcg atttggcccaaaaaggggactgcagttttctggtataacctctttcgaagtggagaaggtgattaccgaacgagacatgc agcatgcccagtgttagtaggctgtaaatgggtatcaaacaaatggtttcatgagagaggaaatgaatttttaagaccat gtggtacaacagaagtggactgaaaccagcccaaccatattttccttctctgctgtcagctttctacattgttcagttca tttctaagaaatgacttctactatgaaaatgacagcattatttattgaagaaaggcaacatctcacaagaaaagaagaca gctctttggacagttggtgctatgtacttatatatggttactgtcattctccttctcccttcagtttctgcaacctccag caatgtgatatgttacagattggccatggaacattttttttttcagaatgtatattttgaaaatgttactgtattttcta ggaagtacaacatccattaaactttttaaaaagaggccacgtg |
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| Transcript ID | habu1_s1085_g03789.t4 |
| Definition | - |
>habu1_s1085_g03789.t4 ggggttgggggacccctgccctagcactattctcaaacaaagattctctttcagatgcttactctgaatcagtattttgc acagggcatcagacacaatcagagacaaaccctcataaatgcagactagggttctgtgaagcattcaaagaatgtaccac aaggctcattggtgttaaaacaattttattttctgaaaacttggctttcatacttctaaggctttttatgactgcacaca tatatattccattgattgaagatggcacaatggattatgttattactgttgacctgtctggggtgcataaaaggagaatt tttcacttctataggtgagacacaagaggcatattacaagtcccgtctgctaaggagttttatctgacagaccaaggaga agagttttttctgcagtacagtagcatctgccatattggaacatcattctctctgaggccagatgacagacctgatttat gcggaaaaagatctggtacagtcattaaaagcatatattcaggaggaagaaaccaaactttctaaaataaaaagctgggc tgagacaatggaatccttaacagtcaaatccacctctgatccagaaggttatcttgctcatcctgtcaatgcctataaat tagtaaagcgcctcaacaaagaatggctggagctggagaatctagttcttgaggacatgaccaagggctttattacaaat ctgacggttcagcgtcagtttttcccaaatgaagaagatgagactggagctgccaaggcattaatgcgtttgcaggacac atacaagctggattctgaaacaatatcaaagggagaatttccaggcacaaagtaccgatctaccttgacagtggatgact gttttggtatggggaaaacagcttacagtgatggagattattatcacacagtgctgtggatgcagcaggccctaaaacaa catgataatggtgaacagacaaccatcagtaaagctgacatcttggattacctcagctatgctgtttttcagctcgggga tttacagagagcaatagagcttacaagacggttggtcatcctagacccaggtcatgagagagcaggcagcaacatgcagt actttgagaagctgctagagagtgaaaaagaaagcaaccaaatcaataaattgtcagtgaaccccagtgagcccaaaacc tacaatggcatttatgaaaggcctcaggactacctgccagagcgtgagacctatgaagccctttgcagaggggaaggcgt gaaactgacgcctcgaaggcagaagaggttgttttgcagataccacaatggaaatcgaaatcctcatttaattatagcgc cttttaaagaagaagatgaatgggacagcccacgtattgtcagatattatgaagtcctatctgatgaagaaatagagaag attaaggagttggctaaaccaaaattggcaagagctacagtccgggacccgaaaacaggtgtactaacagtagccaacta ccgggtttccaaaagttcctggctggaagaagaggacgatctggttgttgccagagtaaatcatcgaatggaacaaatta caggattaactaccaaaacagctgaattgttgcaggttgctaattatggcatgggaggacaatatgaacctcattttgac ttctcaaggcgaccctttgacatcacactcagaacggaaggaaataggctagcaacatttcttaactataaagaggaacc tgatgttttcaagcatttagggactgggaaccgtttggccacttttttgaactatatgagtgatgttgaagcaggaggtg caacagttttcccagattttggagctgcgatttggcccaaaaaggggactgcagttttctggtataacctctttcgaagt ggagaaggtgattaccgaacgagacatgcagcatgcccagtgttagtaggctgtaaatgggtatcaaacaaatggtttca tgagagaggaaatgaatttttaagaccatgtggtacaacagaagtggactgaaaccagcccaaccatattttccttctct gctgtcagctttctacattgttcagttcatttctaagaaatgacttctactatgaaaatgacagcattatttattgaaga aaggcaacatctcacaagaaaagaagacagctctttggacagttggtgctatgtacttatatatggttactgtcattctc cttctcccttcagtttctgcaacctccagcaatgtgatatgttacagattggccatggaacattttttttttcagaatgt atattttgaaaatgttactgtattttctaggaagtacaacatccattaaactttttaaaaagaggccacgtg |
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Protein
| Protein ID | habu1_s1085_g03789.t1 |
|---|---|
| Definition | - |
>habu1_s1085_g03789.t1 MTDLIYAEKDLVQSLKAYIQEEETKLSKIKSWAETMESLTVKSTSDPEGYLAHPVNAYKLVKRLNKEWLELENLVLEDMT KGFITNLTVQRQFFPNEEDETGAAKALMRLQDTYKLDSETISKGEFPGTKYRSTLTVDDCFGMGKTAYSDGDYYHTVLWM QQALKQHDNGEQTTISKADILDYLSYAVFQLGDLQRAIELTRRLVILDPGHERAGSNMQYFEKLLESEKESNQINKLSVN PSEPKTYNGIYERPQDYLPERETYEALCRGEGVKLTPRRQKRLFCRYHNGNRNPHLIIAPFKEEDEWDSPRIVRYYEVLS DEEIEKIKELAKPKLARATVRDPKTGVLTVANYRVSKSSWLEEEDDLVVARVNHRMEQITGLTTKTAELLQVANYGMGGQ YEPHFDFSRKEEPDVFKHLGTGNRLATFLNYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPV LVGCKWVSNKWFHERGNEFLRPCGTTEVD |
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| Protein ID | habu1_s1085_g03789.t2 |
| Definition | - |
>habu1_s1085_g03789.t2 MTDLIYAEKDLVQSLKAYIQEEETKLSKIKSWAETMESLTVKSTSDPEGYLAHPVNAYKLVKRLNKEWLELENLVLEDMT KGFITNLTVQRQFFPNEEDETGAAKALMRLQDTYKLDSETISKGEFPGTKYRSTLTVDDCFGMGKTAYSDGDYYHTVLWM QQALKQHDNGEQTTISKADILDYLSYAVFQLGDLQRAIELTRRLVILDPGHERAGSNMQYFEKLLESEKESNQINKLSVN PSEPKTYNGIYERPQDYLPERETYEALCRGEGVKLTPRRQKRLFCRYHNGNRNPHLIIAPFKEEDEWDSPRIVRYYEVLS DEEIEKIKELAKPKLARATVRDPKTGVLTVANYRVSKSSWLEEEDDLVVARVNHRMEQITGLTTKTAELLQVANYGMGGQ YEPHFDFSRRPFDITLRTEGNRLATFLNYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLV GCKWVSNKWFHERGNEFLRPCGTTEVD |
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| Protein ID | habu1_s1085_g03789.t3 |
| Definition | - |
>habu1_s1085_g03789.t3 MTDLIYAEKDLVQSLKAYIQEEETKLSKIKSWAETMESLTVKSTSDPEGYLAHPVNAYKLVKRLNKEWLELENLVLEDMT KGFITNLTVQRQFFPNEEDETGAAKALMRLQDTYKLDSETISKGEFPGTKYRSTLTVDDCFGMGKTAYSDGDYYHTVLWM QQALKQHDNGEQTTISKADILDYLSYAVFQLGDLQRAIELTRRLVILDPGHERAGSNMQYFEKLLESEKESNQINKLSVN PSEPKTYNGIYERPQDYLPERETYEALCRGEGVKLTPRRQKRLFCRYHNGNRNPHLIIAPFKEEDEWDSPRIVRYYEVLS DEEIEKIKELAKPKLARATVRDPKTGVLTVANYRVSKSSWLEEEDDLVVARVNHRMEQITGLTTKTAELLQVANYGMGGQ YEPHFDFSRRPFDITLRTEGNRLATFLNYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLV GCKWVSNKWFHERGNEFLRPCGTTEVD |
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| Protein ID | habu1_s1085_g03789.t4 |
| Definition | - |
>habu1_s1085_g03789.t4 MTDLIYAEKDLVQSLKAYIQEEETKLSKIKSWAETMESLTVKSTSDPEGYLAHPVNAYKLVKRLNKEWLELENLVLEDMT KGFITNLTVQRQFFPNEEDETGAAKALMRLQDTYKLDSETISKGEFPGTKYRSTLTVDDCFGMGKTAYSDGDYYHTVLWM QQALKQHDNGEQTTISKADILDYLSYAVFQLGDLQRAIELTRRLVILDPGHERAGSNMQYFEKLLESEKESNQINKLSVN PSEPKTYNGIYERPQDYLPERETYEALCRGEGVKLTPRRQKRLFCRYHNGNRNPHLIIAPFKEEDEWDSPRIVRYYEVLS DEEIEKIKELAKPKLARATVRDPKTGVLTVANYRVSKSSWLEEEDDLVVARVNHRMEQITGLTTKTAELLQVANYGMGGQ YEPHFDFSRRPFDITLRTEGNRLATFLNYKEEPDVFKHLGTGNRLATFLNYMSDVEAGGATVFPDFGAAIWPKKGTAVFW YNLFRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGNEFLRPCGTTEVD |
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