Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1085_g03791
Locus habu1_scaffold1085 : 347246 ... 413818 : +
To GenomeBrowser habu1_scaffold1085:347246..413818
Genes list of scaffold habu1_scaffold1085

Annotation by Blast2GO
Annotation GO
solute carrier family 22 member 4 GO:0005739 GO:0006641 GO:0009437 GO:0015226 GO:0015491 GO:0016021 GO:0016324 GO:0030165 GO:1902603

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1085_g03791.t2 2 1 Sugar_tr 142 175 2.4e-20 72.5 1.3e-07 0.00097 17.8
habu1_s1085_g03791.t2 3 1 MFS_1 144 176 8.7e-14 50.9 1.6e-07 0.0012 17.6
habu1_s1085_g03791.t2 2 2 Sugar_tr 187 432 2.4e-20 72.5 1.5e-19 1.1e-15 57.1
habu1_s1085_g03791.t2 3 2 MFS_1 227 390 8.7e-14 50.9 7.4e-11 5.5e-07 28.6
habu1_s1085_g03791.t2 3 3 MFS_1 298 431 8.7e-14 50.9 1.3e-10 9.9e-07 27.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1085_g03791.t2 gi|675644691|ref|XP_008989653.1| PREDICTED: solute carrier family 22 member 4 isoform X4 [Callithrix jacchus] 0.0
habu1_s1085_g03791.t2 gi|183986242|gb|AAI66421.1| Slc22a5 protein [Rattus norvegicus] 0.0
habu1_s1085_g03791.t2 gi|625264481|ref|XP_007623696.1| PREDICTED: solute carrier family 22 member 5 isoform X3 [Cricetulus griseus] 0.0
habu1_s1085_g03791.t2 gi|545516737|ref|XP_005626574.1| PREDICTED: solute carrier family 22 member 4 isoform X4 [Canis lupus familiaris] 0.0
habu1_s1085_g03791.t2 gi|568974967|ref|XP_006533868.1| PREDICTED: solute carrier family 22 member 21 isoform X2 [Mus musculus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 2.5
Venom grand-1 1.5
Pit, infrared sensing 2.4
Nose 5.4
Brain-1 4.9
Eye 1.5
fetal fibroblast 11.0
venom gland-2 5.3
Brain-2 3.2
Spleen 2.0
Lung 1.7
Liver 1.5
Kidney 5.3
Pancreas 1.5
Small intestine 11.4
Large intestine 2.2
Stomach 2.5
heart 1.1
ovary 1.4
cheek muscle 0.2

Transcript
Transcript IDhabu1_s1085_g03791.t1
Definition-
>habu1_s1085_g03791.t1
gaccggcagagaccccacctccggagggatgccagaaccagtcagaagggcgcagcgcgggctctgttcagcagccggtc
tggggggtgtagcttttcctccgccggccgttctttgtgcccgtagccgctatgcgggattacgacgagatcatcgcctt
cctgggcgagtggggtccctaccagcgtctcatcttcttcttactcagcgccagcatcatccccaatggcttcaacggca
tgtccgccgttttcttagccggcacccccgagcaccggtgccgggtgcccgccagcgccaacctgagcgtggaatggctc
aacgccagcatccccctggaggatcgtgacgggcggcaggtgcggagccagtgcagccgctacagcctcggcgctctcat
caatttctccgcctggaacctggtgcccggccgcgatgtcaatctcagccaggtggagcaggagaagtgcctggatggct
gggagtacagccgggaggtttatctttccacgatcgtcacggagtggaatctcgtatgtgacaatgattggaaagctcct
ctaactacatctttgttctttgtgggtgtgctgcttggatcttttatatctggacaactctcagacaagtttggcagaaa
agctattctatttgcaaccatgggtgtgcagacaggtttcagcttcctccagatcttctcaaccagctgggaaatgttca
cagtgctttttcttatagttggcatggggcagatttcaaattacgttgtggccttcatattaggcacagaaattcttggc
aaatcagttcgtattatattctctacgttaggagtttgcatattttttgcaattggctacatgttgctgccactatttgc
ttacttcatcagagaatggcggatgctgctactggctcttactatccctggggtgtgctgcattccactgtggtggttta
ttcctgaatctcctcggtggctgatctctcaaggaagattcagagaagctgaagctattattcggaaggcagcacaaaca
aacaggattccagctccatcaataattttagatccagtggaggtagaagatttgaaagccaagcaacatcagggtgtgtt
tttggacttgttcagatcacgaaacattgcaattatgacttttatgtctcttcttttatggatgtttacatctattggct
atttcggtctgtcactcagcacccctaatctgcatggagatgcctacttcaattgttttctgtcagcagtcattgaggtc
ccagcctatgtgattgcttggctcctcctgcgcatcttgcctcggcgatatacaatatctggcaccctcttcttgggagg
aggagttattttgttcatacagttagtaccttcagatctccacattctgtctctcatcttagtgatgctggggaaatttg
ggatcacatcagccttctccatgctttatgtctacactgcagaactctacccaacgacagtaagaaacatggcagtgggt
tctgcttccatgtcatcccgggtgggcagcattattgcaccatactttgttttcctgggtgcctatggtaaatttctacc
ttacatcatcatgggcagcctaacgttattaatagggattctcaccctcttattaccggaaagttatggaaaacctcttc
cagagacatttgatgagatgcaacaaattaatgggttaagcaaaagaaaacatctctacagggtagagaattcagagcaa
agtgaactgaccatcaagaatatgacatcattttgatcatatcagttgaatggaagagtttgtggttaacaatatttcta
aagatatatgaaagtcgataacactattagacagacttttcctaacgaacctgtggttctcaaaacactgatgtaccaaa
tatgtggaattgtgttaaattgctgtgttggcacaagttacttttatcagtaactatttctgttccttggtttgggattt
gtatttttgtgaggtcttgaatattttcatctcttcttgaggtgtaggtattattttattgttgtatatgtgtatttatc
ctttttataacatttcttgaactccaaacatcatttataagtattctagtctggattaagatctatagtataatattaca
ctttagaaaataaatggcagaattttttgtggatagggctatatcttctaaggctcacttgaaaaatctttaaagtaaaa
attgactataataaattgtgattttaaactttaaaagatatttttaaaagtgaagcacaggttttgaaatttgtttactt
attagaaataaattataactatattttttctgtcaaccagaaaatagctctggaaatccaaaatctaaagttaatcatca
ttggcttctaccttttaggaaatttgcctgtcaaagagggaacaatgcatacaatacgtagacatggtttctacacactt
tgcattctagttatttatatgattaattaattcactgggcccaaatacagctctttatttattttcttcaatgagaaata
taaatcaggtattatgttggatataagtcagcctgccagaagaaactattttatgaaactggatttttaaagcattttag
gtgataaatattaaagatgatggcgtccatgagcttgtcaacaaatcctttgctgagaaagtcatatgataaaatagtga
ttaagatcaagtattcagacaattggatctttatgtatagatcacaatttgttgcccatttaacactgaaattctttgtc
ttttgtcaacaaaatcatatgcctacatctatttcttatttgaaaggcttaaaatggtattttatgaaaatgtaaatttc
tgtaattcagattttgcctgcatcatgggaggaaactggctttctaagtaccattcctaataatatattaatcagattta
attcattaaaaagtatgcaacccacttatctt
Transcript IDhabu1_s1085_g03791.t2
Definition-
>habu1_s1085_g03791.t2
gaccggcagagaccccacctccggagggatgccagaaccagtcagaagggcgcagcgcgggctctgttcagcagccggtc
tggggggtgtagcttttcctccgccggccgttctttgtgcccgtagccgctatgcgggattacgacgagatcatcgcctt
cctgggcgagtggggtccctaccagcgtctcatcttcttcttactcagcgccagcatcatccccaatggcttcaacggca
tgtccgccgttttcttagccggcacccccgagcaccggtgccgggtgcccgccagcgccaacctgagcgtggaatggctc
aacgccagcatccccctggaggatcgtgacgggcggcaggtgcggagccagtgcagccgctacagcctcggcgctctcat
caatttctccgcctggaacctggtgcccggccgcgatgtcaatctcagccaggtggagcaggagaagtgcctggatggct
gggagtacagccgggaggtttatctttccacgatcgtcacggagtggaatctcgtatgtgacaatgattggaaagctcct
ctaactacatctttgttctttgtgggtgtgctgcttggatcttttatatctggacaactctcagacaagtttggcagaaa
agctattctatttgcaaccatggatttcaaattacgttgtggccttcatattaggtttattcctgaatctcctcggtggc
tgatctctcaaggaagattcagagaagctgaagctattattcggaaggcagcacaaacaaacaggattccagctccatca
ataattttagatccagtggaggtagaagatttgaaagccaagcaacatcagggtgtgtttttggacttgttcagatcacg
aaacattgcaattatgacttttatgtctcttcttttatggatgtttacatctattggctatttcggtctgtcactcagca
cccctaatctgcatggagatgcctacttcaattgttttctgtcagcagtcattgaggtcccagcctatgtgattgcttgg
ctcctcctgcgcatcttgcctcggcgatatacaatatctggcaccctcttcttgggaggaggagttattttgttcataca
gttagtaccttcagatctccacattctgtctctcatcttagtgatgctggggaaatttgggatcacatcagccttctcca
tgctttatgtctacactgcagaactctacccaacgacagtaagaaacatggcagtgggttctgcttccatgtcatcccgg
gtgggcagcattattgcaccatactttgttttcctgggtgcctatggtaaatttctaccttacatcatcatgggcagcct
aacgttattaatagggattctcaccctcttattaccggaaagttatggaaaacctcttccagagacatttgatgagatgc
aacaaattaatgggttaagcaaaagaaaacatctctacagggtagagaattcagagcaaagtgaactgaccatcaagaat
atgacatcattttgatcatatcagttgaatggaagagtttgtggttaacaatatttctaaagatatatgaaagtcgataa
cactattagacagacttttcctaacgaacctgtggttctcaaaacactgatgtaccaaatatgtggaattgtgttaaatt
gctgtgttggcacaagttacttttatcagtaactatttctgttccttggtttgggatttgtatttttgtgaggtcttgaa
tattttcatctcttcttgaggtgtaggtattattttattgttgtatatgtgtatttatcctttttataacatttcttgaa
ctccaaacatcatttataagtattctagtctggattaagatctatagtataatattacactttagaaaataaatggcaga
attttttgtggatagggctatatcttctaaggctcacttgaaaaatctttaaagtaaaaattgactataataaattgtga
ttttaaactttaaaagatatttttaaaagtgaagcacaggttttgaaatttgtttacttattagaaataaattataacta
tattttttctgtcaaccagaaaatagctctggaaatccaaaatctaaagttaatcatcattggcttctaccttttaggaa
atttgcctgtcaaagagggaacaatgcatacaatacgtagacatggtttctacacactttgcattctagttatttatatg
attaattaattcactgggcccaaatacagctctttatttattttcttcaatgagaaatataaatcaggtattatgttgga
tataagtcagcctgccagaagaaactattttatgaaactggatttttaaagcattttaggtgataaatattaaagatgat
ggcgtccatgagcttgtcaacaaatcctttgctgagaaagtcatatgataaaatagtgattaagatcaagtattcagaca
attggatctttatgtatagatcacaatttgttgcccatttaacactgaaattctttgtcttttgtcaacaaaatcatatg
cctacatctatttcttatttgaaaggcttaaaatggtattttatgaaaatgtaaatttctgtaattcagattttgcctgc
atcatgggaggaaactggctttctaagtaccattcctaataatatattaatcagatttaattcattaaaaagtatgcaac
ccacttatctt

Protein
Protein IDhabu1_s1085_g03791.t1
Definition-
>habu1_s1085_g03791.t1
MRDYDEIIAFLGEWGPYQRLIFFLLSASIIPNGFNGMSAVFLAGTPEHRCRVPASANLSVEWLNASIPLEDRDGRQVRSQ
CSRYSLGALINFSAWNLVPGRDVNLSQVEQEKCLDGWEYSREVYLSTIVTEWNLVCDNDWKAPLTTSLFFVGVLLGSFIS
GQLSDKFGRKAILFATMGVQTGFSFLQIFSTSWEMFTVLFLIVGMGQISNYVVAFILGTEILGKSVRIIFSTLGVCIFFA
IGYMLLPLFAYFIREWRMLLLALTIPGVCCIPLWWFIPESPRWLISQGRFREAEAIIRKAAQTNRIPAPSIILDPVEVED
LKAKQHQGVFLDLFRSRNIAIMTFMSLLLWMFTSIGYFGLSLSTPNLHGDAYFNCFLSAVIEVPAYVIAWLLLRILPRRY
TISGTLFLGGGVILFIQLVPSDLHILSLILVMLGKFGITSAFSMLYVYTAELYPTTVRNMAVGSASMSSRVGSIIAPYFV
FLGAYGKFLPYIIMGSLTLLIGILTLLLPESYGKPLPETFDEMQQINGLSKRKHLYRVENSEQSELTIKNMTSF
Protein IDhabu1_s1085_g03791.t2
Definition-
>habu1_s1085_g03791.t2
MRDYDEIIAFLGEWGPYQRLIFFLLSASIIPNGFNGMSAVFLAGTPEHRCRVPASANLSVEWLNASIPLEDRDGRQVRSQ
CSRYSLGALINFSAWNLVPGRDVNLSQVEQEKCLDGWEYSREVYLSTIVTEWNLVCDNDWKAPLTTSLFFVGVLLGSFIS
GQLSDKFGRKAILFATMDFKLRCGLHIRFIPESPRWLISQGRFREAEAIIRKAAQTNRIPAPSIILDPVEVEDLKAKQHQ
GVFLDLFRSRNIAIMTFMSLLLWMFTSIGYFGLSLSTPNLHGDAYFNCFLSAVIEVPAYVIAWLLLRILPRRYTISGTLF
LGGGVILFIQLVPSDLHILSLILVMLGKFGITSAFSMLYVYTAELYPTTVRNMAVGSASMSSRVGSIIAPYFVFLGAYGK
FLPYIIMGSLTLLIGILTLLLPESYGKPLPETFDEMQQINGLSKRKHLYRVENSEQSELTIKNMTSF

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