Gene
| Gene Model ID | habu1_s1085_g03794 |
|---|---|
| Locus | habu1_scaffold1085 : 569368 ... 619255 : + |
| To GenomeBrowser | habu1_scaffold1085:569368..619255 |
| Genes list of scaffold | habu1_scaffold1085 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna repair protein rad50 | GO:0000014 GO:0000019 GO:0000737 GO:0000784 GO:0003677 GO:0004003 GO:0005657 GO:0006302 GO:0007004 GO:0008408 GO:0016020 GO:0030674 GO:0030870 GO:0031954 GO:0032508 GO:0033674 GO:0035861 GO:0045120 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1085_g03794.t2 | 1 | 1 | AAA_23 | 6 | 230 | 6.6e-25 | 88.6 | 3.1e-28 | 6.6e-25 | 88.6 |
| habu1_s1085_g03794.t2 | 1 | 1 | Rad50_zn_hook | 615 | 670 | 1.3e-15 | 56.5 | 3.2e-18 | 6.7e-15 | 54.2 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.5 |
| Venom grand-1 | 2.8 |
| Pit, infrared sensing | 4.9 |
| Nose | 4.3 |
| Brain-1 | 4.6 |
| Eye | 3.5 |
| fetal fibroblast | 13.0 |
| venom gland-2 | 5.1 |
| Brain-2 | 5.4 |
| Spleen | 3.4 |
| Lung | 4.1 |
| Liver | 1.3 |
| Kidney | 2.8 |
| Pancreas | 1.5 |
| Small intestine | 1.9 |
| Large intestine | 2.5 |
| Stomach | 2.5 |
| heart | 6.0 |
| ovary | 21.8 |
| cheek muscle | 3.7 |
Transcript
| Transcript ID | habu1_s1085_g03794.t1 |
|---|---|
| Definition | - |
>habu1_s1085_g03794.t1 cggcatgaaaaaggttgagaaccactgatctaaagaaatgatcctgtttcctttcagttaccacagagtacctcagacta tatataaattctatatttagaaatttgtttatatgcaaatctaagcaaattacatatggcatattgtttcccttatctag aaagattactgaaactgtcactttttattctatttaactattactctgcagggttttttgaatacagtttactgctagtg gaaagaagaatatttttcaaacatgtctaagattgataaaatgagcattcttggtgtgaggagctttggtgtggaggata aagataaacaagttatcgctttctttaatcctctaactattttggtgggtccaaatggtgctggaaaaacgaccatcata gaatgcctcaaatatatttgtactggggacttcccacctggcagcaaaggaaattcatttgtccatgatccaaaagttgc caatgaaacagatgtcagagctcagataagacttcaatttcatgatgttaatggagagcttgttgctgtccagcggtcca tggtatgttctcagaaaggaaaaaagacagagtttaaaactcttgaaggaataattacaagaataaagcatggggagaaa gtcagtctgagctccaagtgcgcagaaatcgaccgagagatgattgctgcccttggagtttctaaatctgtaattaataa tgtcattttctgccatcaagaagattccaactggcctttaagtgaaggaaaggccctgaaacagaaattcgatgagatct tttcagcgacaaggtatattaaggctttggaaacgcttcgtcaggtgcgcctgaagcaagggcagcgagtgaaagaatgt caggtggaactgaagtacttgaagcagaataaagaaaaagcacaagagatccagaatcagctaactggcagggaaactca gttagctgcctccaaagaaaacgtcagacatattgaaaaccaactggagcctctcaaggtttttcaaggaagtgatgagc aacttagaaggatgtatcaaaaccatcagaaaactgtgagcgaaaaggagaagcggtttacggagtgtcagcgagaactg gaggcagtaaacaaagaatgccaaagatttaacagagaaaaatcagaattattagttgaacaaggtcgtcttcagttaca agcagatcgttaccagcagcatattagaacccgagattcattaattcagtctttggcagctcagttggaattggaaggat ttgaaagaacacctttgaatgagagacaaatcaatagttttcagaggctggtaaaagagagacaggacaaagatatagaa actgctaataatttaatgaaagaatttggcgagaaggaaacaatgaagcagaaacaaattgatgaaataagggataaaaa aactggacttgaaaaaaccattgtcctaaagtcagatattcaaaataagaaacaacttgaagtaaagaatctaaaacagg aattacatcagcttgaaggatcctcaaatcgactcctggaactggatcaagaacttacaaaagcaaaacacgaattagct gaagctgagaaaaattgcaacgttgaaaccctagaaatggaaattaaggaactgcaaagagaaaagggaaatttggacag tactcttcggaaactggataaagagatggaacaactgaacctgaatactacaattataacccaaatggatatgctgaaaa aagataaagctgacaaagaagaacaaatcagaaaaattaaatttagacacagtgaagaattaatctgcttattgggattt tttccaagcaaaaatcagcttgaagattggcttcactcgagagttaaagaaattaatcagacaagagacaaacttgccaa gctcaacaaagaacttgtttcagcagaacaaaacaaaagtcacattaccaccgaactaaggaaaaaggaggaacagctgt ccacatatgaagaaaagctttttgatgtgtgtggaagtcaagattttgaaagtgatcttaataaactgcagcatgatatt gaaaaaacatccaagcagcgagctatgcttgcaggagccacagcagtttattcacagttcatcacccaactaacagacga aagccagtcatgttgcccggtgtgtcagagggtctttgaaaaagaggcagaactgcaagatgtcataaatgatcttcaag ccaaattgcgccttgctccagacaaactgaaggcaacagaatctgaattgaagaaaagagagaagaaacgtgatgatatg atttctctaaaacctatcagacaaacagtatctgaactccacgaaaaagatatacctgagttgagaaacaagctacagat tcttaatagagagattcagcgccttaaagctgatatagaagaacaggaaaccctcttgggtactatcataacagaggaag aaagtgcaaaagcatgtctgcaggatattatacttttggaaagggatcagattgatctaaaggatgttgaaagaaaaatt gctcagcaggctgctaggctccagggagtggatttgggccggactcttttacaagtgagccaagagaaacaggaaaaaaa acatcagtgggatacagttacaagcaaaattgaactgaagcagacacttaaacaagaccaacaaaatcaagtccagcatt taaaatgcacagtaaatgaactcaaagctgagaaacttcagatttccagttgcatgcagcgtcgacagcaacttgaagaa cagactgtagaattaacaacggaagtgcaatctttaaacagagagatcaaggaagcaaaggaacagttatttcctttgga aacaactttggaaaaactacaacgagaaaaagaagagttgttggacaaaaagaatacaagttacaaaataacacaagaga agattaatgacattaaagaaaaagttaaaaatatccataaccatatgaaagagattgagaattatatccaagaagggaaa gaagaatacaagcagcaaaaggaatctcaactggagaaagtcacagttcagctagtagattgtgagaaaaatacagagaa gataaataaagaaatgggaacaattaggcaagatatcgatactcagaagattcaggagcgatggttagaagataatctta ctttaagaaaaagaaatgaagatctaaaagaagttgaagataacataaaacagcttttgaaggaaatgggggaaatgcag gtaccacaactgaaaagaaatcaaaaacatttagaagaaaagatagaggatttgaaaagaagccatagtttggcacttgg tcggcagcatggatttgaggaggagatcctaagatataagagagagctgaaagaacaacagtttaaagatgctgaagaga aatatagagaaatgatgatagttatgaggaccacagaactggcaaacaaggatcttgatatttactatagagcactggat cagataatcaaaagtagatctcagcagcgtaactttcaactccttgtgataactcatgatgaagattttgtggaactgtt gagtcgatctgaatatgtggagaaattctatagaattaagaagaatcttgaccagtgttctgagattgtgaaatgcagtg tcacaactttaggatcatatgttcattagagcttccaaatgactgtattgtaagattcttccaaataaagattcttcttt ggataaaaaaa |
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| Transcript ID | habu1_s1085_g03794.t2 |
| Definition | - |
>habu1_s1085_g03794.t2 cggcatgaaaaaggttgagaaccactgatctaaagaaatgatcctgtttcctttcagttaccacagagtacctcagacta tatataaaggttttttgaatacagtttactgctagtggaaagaagaatatttttcaaacatgtctaagattgataaaatg agcattcttggtgtgaggagctttggtgtggaggataaagataaacaagttatcgctttctttaatcctctaactatttt ggtgggtccaaatggtgctggaaaaacgaccatcatagaatgcctcaaatatatttgtactggggacttcccacctggca gcaaaggaaattcatttgtccatgatccaaaagttgccaatgaaacagatgtcagagctcagataagacttcaatttcat gatgttaatggagagcttgttgctgtccagcggtccatggtatgttctcagaaaggaaaaaagacagagtttaaaactct tgaaggaataattacaagaataaagcatggggagaaagtcagtctgagctccaagtgcgcagaaatcgaccgagagatga ttgctgcccttggagtttctaaatctgtaattaataatgtcattttctgccatcaagaagattccaactggcctttaagt gaaggaaaggccctgaaacagaaattcgatgagatcttttcagcgacaaggtatattaaggctttggaaacgcttcgtca ggtgcgcctgaagcaagggcagcgagtgaaagaatgtcaggtggaactgaagtacttgaagcagaataaagaaaaagcac aagagatccagaatcagctaactggcagggaaactcagttagctgcctccaaagaaaacgtcagacatattgaaaaccaa ctggagcctctcaaggtttttcaaggaagtgatgagcaacttagaaggatgtatcaaaaccatcagaaaactgtgagcga aaaggagaagcggtttacggagtgtcagcgagaactggaggcagtaaacaaagaatgccaaagatttaacagagaaaaat cagaattattagttgaacaaggtcgtcttcagttacaagcagatcgttaccagcagcatattagaacccgagattcatta attcagtctttggcagctcagttggaattggaaggatttgaaagaacacctttgaatgagagacaaatcaatagttttca gaggctggtaaaagagagacaggacaaagatatagaaactgctaataatttaatgaaagaatttggcgagaaggaaacaa tgaagcagaaacaaattgatgaaataagggataaaaaaactggacttgaaaaaaccattgtcctaaagtcagatattcaa aataagaaacaacttgaagtaaagaatctaaaacaggaattacatcagcttgaaggatcctcaaatcgactcctggaact ggatcaagaacttacaaaagcaaaacacgaattagctgaagctgagaaaaattgcaacgttgaaaccctagaaatggaaa ttaaggaactgcaaagagaaaagggaaatttggacagtactcttcggaaactggataaagagatggaacaactgaacctg aatactacaattataacccaaatggatatgctgaaaaaagataaagctgacaaagaagaacaaatcagaaaaattaaatt tagacacagtgaagaattaatctgcttattgggattttttccaagcaaaaatcagcttgaagattggcttcactcgagag ttaaagaaattaatcagacaagagacaaacttgccaagctcaacaaagaacttgtttcagcagaacaaaacaaaagtcac attaccaccgaactaaggaaaaaggaggaacagctgtccacatatgaagaaaagctttttgatgtgtgtggaagtcaaga ttttgaaagtgatcttaataaactgcagcatgatattgaaaaaacatccaagcagcgagctatgcttgcaggagccacag cagtttattcacagttcatcacccaactaacagacgaaagccagtcatgttgcccggtgtgtcagagggtctttgaaaaa gaggcagaactgcaagatgtcataaatgatcttcaagccaaattgcgccttgctccagacaaactgaaggcaacagaatc tgaattgaagaaaagagagaagaaacgtgatgatatgatttctctaaaacctatcagacaaacagtatctgaactccacg aaaaagatatacctgagttgagaaacaagctacagattcttaatagagagattcagcgccttaaagctgatatagaagaa caggaaaccctcttgggtactatcataacagaggaagaaagtgcaaaagcatgtctgcaggatattatacttttggaaag ggatcagattgatctaaaggatgttgaaagaaaaattgctcagcaggctgctaggctccagggagtggatttgggccgga ctcttttacaagtgagccaagagaaacaggaaaaaaaacatcagtgggatacagttacaagcaaaattgaactgaagcag acacttaaacaagaccaacaaaatcaagtccagcatttaaaatgcacagtaaatgaactcaaagctgagaaacttcagat ttccagttgcatgcagcgtcgacagcaacttgaagaacagactgtagaattaacaacggaagtgcaatctttaaacagag agatcaaggaagcaaaggaacagttatttcctttggaaacaactttggaaaaactacaacgagaaaaagaagagttgttg gacaaaaagaatacaagttacaaaataacacaagagaagattaatgacattaaagaaaaagttaaaaatatccataacca tatgaaagagattgagaattatatccaagaagggaaagaagaatacaagcagcaaaaggaatctcaactggagaaagtca cagttcagctagtagattgtgagaaaaatacagagaagataaataaagaaatgggaacaattaggcaagatatcgatact cagaagattcaggagcgatggttagaagataatcttactttaagaaaaagaaatgaagatctaaaagaagttgaagataa cataaaacagcttttgaaggaaatgggggaaatgcaggtaccacaactgaaaagaaatcaaaaacatttagaagaaaaga tagaggatttgaaaagaagccatagtttggcacttggtcggcagcatggatttgaggaggagatcctaagatataagaga gagctgaaagaacaacagtttaaagatgctgaagagaaatatagagaaatgatgatagttatgaggaccacagaactggc aaacaaggatcttgatatttactatagagcactggatcagataatcaaaagtagatctcagcagcgtaactttcaactcc ttgtgataactcatgatgaagattttgtggaactgttgagtcgatctgaatatgtggagaaattctatagaattaagaag aatcttgaccagtgttctgagattgtgaaatgcagtgtcacaactttaggatcatatgttcattagagcttccaaatgac tgtattgtaagattcttccaaataaagattcttctttggataaaaaaa |
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Protein
| Protein ID | habu1_s1085_g03794.t1 |
|---|---|
| Definition | - |
>habu1_s1085_g03794.t1 MSKIDKMSILGVRSFGVEDKDKQVIAFFNPLTILVGPNGAGKTTIIECLKYICTGDFPPGSKGNSFVHDPKVANETDVRA QIRLQFHDVNGELVAVQRSMVCSQKGKKTEFKTLEGIITRIKHGEKVSLSSKCAEIDREMIAALGVSKSVINNVIFCHQE DSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRLKQGQRVKECQVELKYLKQNKEKAQEIQNQLTGRETQLAASKEN VRHIENQLEPLKVFQGSDEQLRRMYQNHQKTVSEKEKRFTECQRELEAVNKECQRFNREKSELLVEQGRLQLQADRYQQH IRTRDSLIQSLAAQLELEGFERTPLNERQINSFQRLVKERQDKDIETANNLMKEFGEKETMKQKQIDEIRDKKTGLEKTI VLKSDIQNKKQLEVKNLKQELHQLEGSSNRLLELDQELTKAKHELAEAEKNCNVETLEMEIKELQREKGNLDSTLRKLDK EMEQLNLNTTIITQMDMLKKDKADKEEQIRKIKFRHSEELICLLGFFPSKNQLEDWLHSRVKEINQTRDKLAKLNKELVS AEQNKSHITTELRKKEEQLSTYEEKLFDVCGSQDFESDLNKLQHDIEKTSKQRAMLAGATAVYSQFITQLTDESQSCCPV CQRVFEKEAELQDVINDLQAKLRLAPDKLKATESELKKREKKRDDMISLKPIRQTVSELHEKDIPELRNKLQILNREIQR LKADIEEQETLLGTIITEEESAKACLQDIILLERDQIDLKDVERKIAQQAARLQGVDLGRTLLQVSQEKQEKKHQWDTVT SKIELKQTLKQDQQNQVQHLKCTVNELKAEKLQISSCMQRRQQLEEQTVELTTEVQSLNREIKEAKEQLFPLETTLEKLQ REKEELLDKKNTSYKITQEKINDIKEKVKNIHNHMKEIENYIQEGKEEYKQQKESQLEKVTVQLVDCEKNTEKINKEMGT IRQDIDTQKIQERWLEDNLTLRKRNEDLKEVEDNIKQLLKEMGEMQVPQLKRNQKHLEEKIEDLKRSHSLALGRQHGFEE EILRYKRELKEQQFKDAEEKYREMMIVMRTTELANKDLDIYYRALDQIIKSRSQQRNFQLLVITHDEDFVELLSRSEYVE KFYRIKKNLDQCSEIVKCSVTTLGSYVH |
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| Protein ID | habu1_s1085_g03794.t2 |
| Definition | - |
>habu1_s1085_g03794.t2 MSKIDKMSILGVRSFGVEDKDKQVIAFFNPLTILVGPNGAGKTTIIECLKYICTGDFPPGSKGNSFVHDPKVANETDVRA QIRLQFHDVNGELVAVQRSMVCSQKGKKTEFKTLEGIITRIKHGEKVSLSSKCAEIDREMIAALGVSKSVINNVIFCHQE DSNWPLSEGKALKQKFDEIFSATRYIKALETLRQVRLKQGQRVKECQVELKYLKQNKEKAQEIQNQLTGRETQLAASKEN VRHIENQLEPLKVFQGSDEQLRRMYQNHQKTVSEKEKRFTECQRELEAVNKECQRFNREKSELLVEQGRLQLQADRYQQH IRTRDSLIQSLAAQLELEGFERTPLNERQINSFQRLVKERQDKDIETANNLMKEFGEKETMKQKQIDEIRDKKTGLEKTI VLKSDIQNKKQLEVKNLKQELHQLEGSSNRLLELDQELTKAKHELAEAEKNCNVETLEMEIKELQREKGNLDSTLRKLDK EMEQLNLNTTIITQMDMLKKDKADKEEQIRKIKFRHSEELICLLGFFPSKNQLEDWLHSRVKEINQTRDKLAKLNKELVS AEQNKSHITTELRKKEEQLSTYEEKLFDVCGSQDFESDLNKLQHDIEKTSKQRAMLAGATAVYSQFITQLTDESQSCCPV CQRVFEKEAELQDVINDLQAKLRLAPDKLKATESELKKREKKRDDMISLKPIRQTVSELHEKDIPELRNKLQILNREIQR LKADIEEQETLLGTIITEEESAKACLQDIILLERDQIDLKDVERKIAQQAARLQGVDLGRTLLQVSQEKQEKKHQWDTVT SKIELKQTLKQDQQNQVQHLKCTVNELKAEKLQISSCMQRRQQLEEQTVELTTEVQSLNREIKEAKEQLFPLETTLEKLQ REKEELLDKKNTSYKITQEKINDIKEKVKNIHNHMKEIENYIQEGKEEYKQQKESQLEKVTVQLVDCEKNTEKINKEMGT IRQDIDTQKIQERWLEDNLTLRKRNEDLKEVEDNIKQLLKEMGEMQVPQLKRNQKHLEEKIEDLKRSHSLALGRQHGFEE EILRYKRELKEQQFKDAEEKYREMMIVMRTTELANKDLDIYYRALDQIIKSRSQQRNFQLLVITHDEDFVELLSRSEYVE KFYRIKKNLDQCSEIVKCSVTTLGSYVH |
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