Gene
| Gene Model ID | habu1_s1085_g03797 |
|---|---|
| Locus | habu1_scaffold1085 : 716465 ... 721407 : - |
| To GenomeBrowser | habu1_scaffold1085:716465..721407 |
| Genes list of scaffold | habu1_scaffold1085 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| reverse transcriptase family protein | EC:2.7.7.49 GO:0003964 GO:0006278 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1085_g03797.t1 | 1 | 1 | RVT_1 | 367 | 492 | 4.0e-10 | 39.4 | 2.0e-13 | 1.5e-09 | 37.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1085_g03797.t1 | gi|339233834|ref|XP_003382034.1| | putative integrase core domain protein [Trichinella spiralis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.1 |
| Brain-1 | 0.1 |
| Eye | 0.0 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.1 |
| Spleen | 0.4 |
| Lung | 0.0 |
| Liver | 4.5 |
| Kidney | 0.1 |
| Pancreas | 0.2 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1085_g03797.t1 |
|---|---|
| Definition | - |
>habu1_s1085_g03797.t1 aacgctggaggagagctcggcaagatttgtccaggaaccccttctcaagcgaagcagcacgaggcgttgaggaggccgcc gaggagcaacgatgtccaagctaggccgtctgtcagaattcgacacagcacatcctgagcattggagttcgtacatggcc tgggtagagaactattttcgggtaaaccaagtttgggaggatggtctcacggctgcaacgttactgtgtgtctgtgggca agagacatttgatattgccgaaaatctggtcgccccagcaccacttgaatccatcgcttattctgagctgaagaaaatgc tacgtgaacattttgaactgaagctttcggtgattgcatggcatcacgcatttgagcagagggaccagcgtcctggagag tctgctgcggactttattgctgcgttgcgacaagcagcgaggccatgcgaatttaaggacctggaagaaagacttcgtga tcgtctagtttgtgggctgagaagtcgtgagctacagcaaaagatatttgcgagagaagacgtttccttccaggatgtcc tgagggagattttggccgacgaagcagcgggcggagctgtgaaggccttgcggctcgccaagaaccctccaacttcgagc gcagtccatcaagaggtcgctcgagaggtatccgaacaggattcagagacggaggttgaccgattgcagcagccagcaga gaaaaggcctcaagagcgaaaggacaaggcaactctattccctcagtgtttcagatgtggaggacgccacaagcgctccg attgccatttccgctccgccatttgccaggcatgtggcaggcaaggccacatagctgccgtctgtttgggttgccagaaa gaccagtcttcggaagaattgcctcggaaagaagtttgcaaggagtttgctgatgtgtttagcccagaactagggttgta caaggggcctccaatttccttgcggttagacccatccatcgcaccgattaggattaagccttgtcgggtgccctttgcgc tcaagcaaaggattaatgcagagctggacaagttgctccagcaaggtatcttggaacctgtggatagtagtccatgggaa acacccatagttactccactgaaagccaatggtgaagtccgcatttgtgctgactataaatgcatgttaaataaagcttt acagcagcactcttatccggtgcctgtggtgagccacattttggcctcactcaagggaggccgcgtttttgccaaacttg atttggctcaggcctatcaacagctaccagtggacgaagcaacggctgaggcccagacaatcgtaacgcaccggggagct ttcaaagtaagaagacagcagtttggggttaacgtagcccctggcatcttccaaagtgtgatggagcgaacgctccgcaa tattccgggggtttgcccttactttgatgatgtcctcattgcaggggaatcaccggaaaacttggctgagaggcttcggt ccgttttgctgcgtttccgcgaagcggggctgaagctgaatgtagagtccatacgactgtaaccagtataatggatggca tcaagcgggaggaaaagatacagacactattagctttcaaggaaattacagaaaaagttaacataatagagaatgaacac aaaaaagaaattgaaatgaatttaaaaagattctaaaatttaattaagtataaaaagaaaaaaagggtggatttgtgagg aataaaattttagaatatgagtgaggctaagtgacacgtaagctatagggtttccacataggatttctacactaagccat aggatttcctggtttgtgtcaaagtacatataagggaataggtgaagcaaaatagcaggggcagggataatgtattttgt ttaggcgatcctgataagattgtaacctctaaagcccagccaatgaggccataggggagggaccaagccataggggaggg accaaggcgtcgggatagaatgtataaaatgtgtgcttttactgtgaaaaaggtgtggctcaaatattgatttggagtcc accactctttgcaaaccgttgtatccaataaatctgtttaatttcaacttgctg |
|
Protein
| Protein ID | habu1_s1085_g03797.t1 |
|---|---|
| Definition | - |
>habu1_s1085_g03797.t1 MSKLGRLSEFDTAHPEHWSSYMAWVENYFRVNQVWEDGLTAATLLCVCGQETFDIAENLVAPAPLESIAYSELKKMLREH FELKLSVIAWHHAFEQRDQRPGESAADFIAALRQAARPCEFKDLEERLRDRLVCGLRSRELQQKIFAREDVSFQDVLREI LADEAAGGAVKALRLAKNPPTSSAVHQEVAREVSEQDSETEVDRLQQPAEKRPQERKDKATLFPQCFRCGGRHKRSDCHF RSAICQACGRQGHIAAVCLGCQKDQSSEELPRKEVCKEFADVFSPELGLYKGPPISLRLDPSIAPIRIKPCRVPFALKQR INAELDKLLQQGILEPVDSSPWETPIVTPLKANGEVRICADYKCMLNKALQQHSYPVPVVSHILASLKGGRVFAKLDLAQ AYQQLPVDEATAEAQTIVTHRGAFKVRRQQFGVNVAPGIFQSVMERTLRNIPGVCPYFDDVLIAGESPENLAERLRSVLL RFREAGLKLNVESIRL |
|