Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s11495_g20473
Locus habu1_scaffold11495 : 1 ... 15566 : +
To GenomeBrowser habu1_scaffold11495:1..15566
Genes list of scaffold habu1_scaffold11495

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s11495_g20473.t1 gi|701407797|ref|XP_009970507.1| PREDICTED: tax1-binding protein 1 homolog [Tyto alba] 0.0
habu1_s11495_g20473.t1 gi|697031595|ref|XP_009577902.1| PREDICTED: tax1-binding protein 1, partial [Fulmarus glacialis] 0.0
habu1_s11495_g20473.t1 gi|723550899|ref|XP_010298197.1| PREDICTED: tax1-binding protein 1, partial [Balearica regulorum gibbericeps] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 30.0
Venom grand-1 48.2
Pit, infrared sensing 29.4
Nose 31.5
Brain-1 20.1
Eye 46.4
fetal fibroblast 22.3
venom gland-2 32.9
Brain-2 22.6
Spleen 28.1
Lung 32.3
Liver 164.0
Kidney 43.6
Pancreas 30.9
Small intestine 67.6
Large intestine 43.7
Stomach 41.7
heart 39.5
ovary 44.9
cheek muscle 129.8

Transcript
Transcript IDhabu1_s11495_g20473.t1
Definition-
>habu1_s11495_g20473.t1
aagcagtcaatcagattccaaaccctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtag
acctacacaaggctggaatgggctacaagcagcttgttagcagcatttcatctaatacagttttggagttttcagaaaag
gagcaagatcatgaaaagaataaggaaatttctaacagaacagtgaaatttatgaaatgcaagctgatgctgtcagatga
gaaattgaattgtacaatgtatgctgatgaactggccaaattggaactgaaatggaaggagcaagtgaaaattagtgaga
gcgtgaagcagcaactagctgcggtgaaagaccagtatttaatgcagttggctgaaaaagacagacagatagatgaatta
acatctcatctagaagccgtcagcaatgagaagaaacctggaaggagaccagaaaatcaaacagaaaggatcaaggaagg
acagatttctcagcaggccctacattttctcaatccagattttaattctgaagataatgggcagattcctgctatagcac
ctagtgtaccacttctgcactatggaaatccctacacaagccaggaaactagagatggagcagatgatgctttttatcct
gatgatatccaaaggccacccatgagaacagcctcttgggaccttgaagatgatgtggtatgcagtcagcctgctcgtaa
gttcagtcgccctgatgatttagaagatcttgaggataataaagatgatgaagcaagtgcatcttcagttccagatccct
cagatctgcacttacatgaacgtagtgcaggtttttgttttgattccagttttgtgcaaatcaagaaatgtccactctgt
gaagtgatgtttcctcctaactatgatcaaaccaagtttgaagagcatgttgaaagtcactggaaggtgtgtccaatgtg
ctgtgaacagtttcctcctgattatgaccagcaaacgtttgaaaaccatgttcaaaaacactttgatcataatgttttaa
atttcgattagatggggtatcattatgcattataacaggtgaaggttgattaaggtatatcagacaagagaatgattcat
gaatgatgtaagcttaaaaaattagtgaccagcattgcagttgattagaataaatctttggcctattcctcaatct

Protein
Protein IDhabu1_s11495_g20473.t1
Definition-
>habu1_s11495_g20473.t1
SSQSDSKPSTMAKTKELSKDVRDKIVDLHKAGMGYKQLVSSISSNTVLEFSEKEQDHEKNKEISNRTVKFMKCKLMLSDE
KLNCTMYADELAKLELKWKEQVKISESVKQQLAAVKDQYLMQLAEKDRQIDELTSHLEAVSNEKKPGRRPENQTERIKEG
QISQQALHFLNPDFNSEDNGQIPAIAPSVPLLHYGNPYTSQETRDGADDAFYPDDIQRPPMRTASWDLEDDVVCSQPARK
FSRPDDLEDLEDNKDDEASASSVPDPSDLHLHERSAGFCFDSSFVQIKKCPLCEVMFPPNYDQTKFEEHVESHWKVCPMC
CEQFPPDYDQQTFENHVQKHFDHNVLNFD

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