Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s11495_g20477
Locus habu1_scaffold11495 : 198866 ... 314631 : +
To GenomeBrowser habu1_scaffold11495:198866..314631
Genes list of scaffold habu1_scaffold11495

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s11495_g20477.t1 gi|602637987|ref|XP_007425827.1| PREDICTED: cyclic AMP-responsive element-binding protein 5-like [Python bivittatus] 0.0
habu1_s11495_g20477.t1 gi|557287628|ref|XP_006026525.1| PREDICTED: cyclic AMP-responsive element-binding protein 5-like isoform X1 [Alligator sinensis] 0.0
habu1_s11495_g20477.t1 gi|723579055|ref|XP_010309748.1| PREDICTED: cyclic AMP-responsive element-binding protein 5-like [Balearica regulorum gibbericeps] 0.0
habu1_s11495_g20477.t1 gi|723120660|ref|XP_010293863.1| PREDICTED: cyclic AMP-responsive element-binding protein 5-like, partial [Phaethon lepturus] 0.0
habu1_s11495_g20477.t1 gi|594036293|ref|XP_006042814.1| PREDICTED: cyclic AMP-responsive element-binding protein 5-like, partial [Bubalus bubalis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.8
Venom grand-1 0.0
Pit, infrared sensing 0.4
Nose 0.1
Brain-1 0.1
Eye 0.3
fetal fibroblast 1.0
venom gland-2 0.0
Brain-2 0.4
Spleen 0.0
Lung 0.0
Liver 0.3
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.1
Stomach 0.0
heart 0.2
ovary 0.2
cheek muscle 0.9

Transcript
Transcript IDhabu1_s11495_g20477.t1
Definition-
>habu1_s11495_g20477.t1
cggtcataagtcgaggactttccctgccgggagcgctgcgcatgcgtggttccgccccctgcaccggccgaggcgtagct
ggcaagcggcagagacggagcaggccgaccaccagctggcccagcccaagggagatttatgaagaatcaaaaatgaattt
ggaacaagagaggccttttgtctgcagtgccccaggctgttcacagcgttttccaacagaggaccatctgatgatccaca
gtcacaagcacgaaatgactttgaagtttccttcgctaaaaacagacaacatgttatcaggtgagaagatagaccaaact
ccaacaccaacccggtttttaaaaaactgtgaggaagtgggactcttcagcgagatagactgcagcttagaacaggagtt
tagaaaggcacaagaagaagacaacaataaaacgaatattccaatgcataatagtgtgggagatgctatgacaggacccg
gggtgcaccagctctctaatcccaggatgccaaatcatgacaccagcattgtgattcaacaagccatgccgtcaccacaa
tcaagttcagtcataacacaagcaccttcaacaaatcggcagattggataaaagcaaaagtctccaataaaaatagaaaa
aaatttggtccccaagtttcaggaacatataaatccaattagattaaagttattcttttaatgctttaat

Protein
Protein IDhabu1_s11495_g20477.t1
Definition-
>habu1_s11495_g20477.t1
MRGSAPCTGRGVAGKRQRRSRPTTSWPSPREIYEESKMNLEQERPFVCSAPGCSQRFPTEDHLMIHSHKHEMTLKFPSLK
TDNMLSGEKIDQTPTPTRFLKNCEEVGLFSEIDCSLEQEFRKAQEEDNNKTNIPMHNSVGDAMTGPGVHQLSNPRMPNHD
TSIVIQQAMPSPQSSSVITQAPSTNRQIG

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