Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1167_g04044
Locus habu1_scaffold1167 : 85526 ... 95066 : +
To GenomeBrowser habu1_scaffold1167:85526..95066
Genes list of scaffold habu1_scaffold1167

Annotation by Blast2GO
Annotation GO
14-3-3 protein zeta delta- partial GO:0019904

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1167_g04044.t1 1 1 14-3-3 4 98 1.4e-38 132.3 8.80015e-42 1.6e-38 132.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1167_g04044.t1 gi|554547762|ref|XP_005868426.1| PREDICTED: 14-3-3 protein zeta/delta-like, partial [Myotis brandtii] 0.0
habu1_s1167_g04044.t1 gi|724877927|ref|XP_010372475.1| PREDICTED: 14-3-3 protein zeta/delta [Rhinopithecus roxellana] 0.0
habu1_s1167_g04044.t1 gi|49119653|gb|AAH73141.1| YWHAZ protein, partial [Homo sapiens] 0.0
habu1_s1167_g04044.t1 gi|507683896|ref|XP_004640148.1| PREDICTED: 14-3-3 protein zeta/delta, partial [Octodon degus] 0.0
habu1_s1167_g04044.t1 gi|701321540|ref|XP_010019950.1| PREDICTED: 14-3-3 protein zeta-like [Nestor notabilis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 15.1
Venom grand-1 4.5
Pit, infrared sensing 14.4
Nose 14.6
Brain-1 30.6
Eye 12.4
fetal fibroblast 29.0
venom gland-2 4.8
Brain-2 30.3
Spleen 7.1
Lung 7.6
Liver 6.7
Kidney 8.0
Pancreas 1.3
Small intestine 6.0
Large intestine 15.3
Stomach 10.5
heart 8.7
ovary 17.5
cheek muscle 3.7

Transcript
Transcript IDhabu1_s1167_g04044.t1
Definition-
>habu1_s1167_g04044.t1
gccgttccgtctccttccgagctgtgccaatgcagcaacgtacccgtggccacatgagcagcaccattttatacagtcgg
ttcgcagcgtctgccctacagggaattgagaaatcagcatggataaaaacgagctggtgcagaaggccaaactggccgag
caggctgagagatatgatgatatggcagcctgcatgaagtctgtgactgagcaaggagcagaattatccaatgaggagag
gaatcttctctcggtcgcttacaaaaatgttgtaggagcaagaaggtcatcttggagagttgtctcaagtattgaacaaa
agacagaaggtgctgagaaaaagcagcaaatggctcgagaatacagagagaaaattgagactgaattaagggacatctgt
aatgatgtgttgattgacctcttcctatctcttgatcattatatcatttttctgatttgctagcacaatttggataaaat
ctttactgaggctccttctgttgcaatatttttgtgagtataccctgcaaactgtttggaaccttttgcaacagctacta
agagtaacttcccagtttcggtggatatccagtatatcaattaaaattatatttaattataccctat

Protein
Protein IDhabu1_s1167_g04044.t1
Definition-
>habu1_s1167_g04044.t1
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTEGAEKKQQMAR
EYREKIETELRDICNDVLIDLFLSLDHYIIFLIC

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