Gene
| Gene Model ID | habu1_s1167_g04046 |
|---|---|
| Locus | habu1_scaffold1167 : 165986 ... 192119 : + |
| To GenomeBrowser | habu1_scaffold1167:165986..192119 |
| Genes list of scaffold | habu1_scaffold1167 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sorting nexin-31 isoform x1 | GO:0035091 GO:0043234 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1167_g04046.t1 | 1 | 1 | PX | 19 | 103 | 1.8e-11 | 43.8 | 5.6e-15 | 4.2e-11 | 42.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1167_g04046.t1 | gi|637347484|ref|XP_003226651.2| | PREDICTED: sorting nexin-31 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s1167_g04046.t1 | gi|637347488|ref|XP_008117680.1| | PREDICTED: sorting nexin-31 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s1167_g04046.t1 | gi|564233217|ref|XP_006260977.1| | PREDICTED: sorting nexin-31 isoform X1 [Alligator mississippiensis] | 0.0 |
| habu1_s1167_g04046.t1 | gi|564233219|ref|XP_006260978.1| | PREDICTED: sorting nexin-31 isoform X2 [Alligator mississippiensis] | 0.0 |
| habu1_s1167_g04046.t1 | gi|602674500|ref|XP_007442740.1| | PREDICTED: sorting nexin-31-like, partial [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.9 |
| Pit, infrared sensing | 0.1 |
| Nose | 3.2 |
| Brain-1 | 2.9 |
| Eye | 1.0 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 4.1 |
| Spleen | 2.1 |
| Lung | 1.2 |
| Liver | 0.1 |
| Kidney | 1.2 |
| Pancreas | 0.7 |
| Small intestine | 1.7 |
| Large intestine | 4.5 |
| Stomach | 51.9 |
| heart | 0.0 |
| ovary | 0.8 |
| cheek muscle | 1.5 |
Transcript
| Transcript ID | habu1_s1167_g04046.t1 |
|---|---|
| Definition | - |
>habu1_s1167_g04046.t1 gcgggcgggcaggcggccggccgcgccatgaagatgcacttcagcatccctctctccgaagagctgctggagaagtttgg cggccgctacgtgctgtattctgtatatctggagggcttccttttctgcaagttacgttacagtcagttgcatcgctgga atgaacagctaagacgagtctttggaaaaggaatgccttcgtttcctccaaaattttaccttgcaatgacaaagtcaatg gctgatgaaaggagaacgcagctagaacaatatctacagaatgtttccgttgacccaagtgttacaaacagcgatgtctt tattagtttctttaggaaattacagcaggaaacatttaaaatccaaacccaacaagcgtttttggatatttatcttcctg atggaaggtatctcaggattgatattcagacatcagacactgctgaaagagtgctagaggtgatctcatacaagattgaa ctttctagggagctaatacaatacttcagcttatttcttattcaagatcacaacaatggacaaatatccatgttgaaaaa actagcagaatttgaacttccttatgtgagtctcctgagtgcgaaagaatcagcttgtaagattgggatcagaaaatggt atatggatccttctttagataaagtgttaatggactgtagaacttcggtgaacttactttacatgcaggttgtacaggag ctagagatgaattgggtcaaacctaatgaggaacagaagcaaaagcttctaatgctgcaaaaggcaccaaataaattgaa gtttttagagctggttcgagggatccagcattatggatatatacaacttgctccttgttcctgtgactaccctgaagttg gttgtactgccactattcatgtgggaaataatgaaattagctgctgcataaagttgcctagcaatcagatcaaagaggtc aatttcaagatcaacaggataaggtgctggcaggtcacatttcttggatcggttttaggccacggacttgatcaattctt ggaactcagaattgagtacaacgaatccgataagtggagatggattgtcttcaatacaaaacaggcatttcttctaagca gttgcttaaaaaagataatatcagagcagctgatgacaacaaccaagaatgatcaagagatgcagattgagcatccagaa ttagatacagctaagaaagtaagcatccgcccaagtcagatatttcattctggttttaagtcaagaaaatggctacagag tagtagatcaaatgaggatgactgtgtatttgagaagataagcgaagaagatttgtgattgacactgatacaaagaatat tcattcttgctggttttaaaatatcacttagccaggatccttactagcaacttgcatcatttagagtcccagccattata ggtagtccttgacttgtgaccacaactgagcccaaaatttatgctgctaagtcagacatttgttaagtgacttttgcccc atttatgacctttcttgccacagttgttaagtgaatcactgcagttgttaagttagtaacatggttgttaagtgaatctg gcttccccactgactttgctttcagaaccccacaaaatgtgaccccaggatactgcaaccacataaatgagtcagctgcc aagcctctgaattttgatcatatgatcatggggatgctgcaatggtcataaatgtaaaaaatggtcagaagtcacatttt tcagtgccattgtaactaaatgaactgttgtaagttgaggactacctgtactatgtcaaaattacaagaggacaggttct atattgtttcaataaaagtcgatgcaacagaagatgca |
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Protein
| Protein ID | habu1_s1167_g04046.t1 |
|---|---|
| Definition | - |
>habu1_s1167_g04046.t1 MKMHFSIPLSEELLEKFGGRYVLYSVYLEGFLFCKLRYSQLHRWNEQLRRVFGKGMPSFPPKFYLAMTKSMADERRTQLE QYLQNVSVDPSVTNSDVFISFFRKLQQETFKIQTQQAFLDIYLPDGRYLRIDIQTSDTAERVLEVISYKIELSRELIQYF SLFLIQDHNNGQISMLKKLAEFELPYVSLLSAKESACKIGIRKWYMDPSLDKVLMDCRTSVNLLYMQVVQELEMNWVKPN EEQKQKLLMLQKAPNKLKFLELVRGIQHYGYIQLAPCSCDYPEVGCTATIHVGNNEISCCIKLPSNQIKEVNFKINRIRC WQVTFLGSVLGHGLDQFLELRIEYNESDKWRWIVFNTKQAFLLSSCLKKIISEQLMTTTKNDQEMQIEHPELDTAKKVSI RPSQIFHSGFKSRKWLQSSRSNEDDCVFEKISEEDL |
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