Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1167_g04049
Locus habu1_scaffold1167 : 304094 ... 336425 : -
To GenomeBrowser habu1_scaffold1167:304094..336425
Genes list of scaffold habu1_scaffold1167

Annotation by Blast2GO
Annotation GO
sperm-associated antigen 1 GO:0043229

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1167_g04049.t1 2 1 TPR_2 224 257 6.0e-28 94.4 3.7e-06 0.0033 17.2
habu1_s1167_g04049.t1 4 1 TPR_11 226 289 0.0 172.0 4.1e-12 3.6e-09 36.1
habu1_s1167_g04049.t1 7 1 TPR_1 226 257 2.0e-39 131.6 3.9e-06 0.0034 16.9
habu1_s1167_g04049.t1 1 1 TPR_16 228 292 1.2e-15 57.6 2.7e-09 2.4e-06 28.0
habu1_s1167_g04049.t1 2 1 TPR_9 237 294 1.2e-16 60.3 1.4e-08 1.2e-05 25.0
habu1_s1167_g04049.t1 2 1 TPR_8 259 290 5.1e-14 50.9 7.4e-06 0.0064 16.1
habu1_s1167_g04049.t1 7 2 TPR_1 266 291 2.0e-39 131.6 3.9e-06 0.0034 16.9
habu1_s1167_g04049.t1 4 2 TPR_11 451 525 0.0 172.0 2.2e-18 1.9e-15 56.2
habu1_s1167_g04049.t1 7 3 TPR_1 496 525 2.0e-39 131.6 4.4e-07 0.00038 19.9
habu1_s1167_g04049.t1 2 2 TPR_9 503 556 1.2e-16 60.3 9.0e-06 0.0078 16.0
habu1_s1167_g04049.t1 7 4 TPR_1 531 558 2.0e-39 131.6 2.6e-06 0.0023 17.4
habu1_s1167_g04049.t1 4 3 TPR_11 716 779 0.0 172.0 5.0e-20 4.3e-17 61.5
habu1_s1167_g04049.t1 7 5 TPR_1 716 746 2.0e-39 131.6 6.7e-07 0.00058 19.3
habu1_s1167_g04049.t1 7 6 TPR_1 751 782 2.0e-39 131.6 5.6e-08 4.9e-05 22.7
habu1_s1167_g04049.t1 4 4 TPR_11 776 813 0.0 172.0 3.0e-07 0.00026 20.5
habu1_s1167_g04049.t1 2 2 TPR_8 784 813 5.1e-14 50.9 1.4e-06 0.0012 18.4
habu1_s1167_g04049.t1 7 7 TPR_1 784 813 2.0e-39 131.6 5.3e-08 4.6e-05 22.8
habu1_s1167_g04049.t1 2 2 TPR_2 784 813 6.0e-28 94.4 4.3e-06 0.0037 17.0
habu1_s1167_g04049.t1 1 1 RPAP3_C 895 987 1.3e-16 60.3 2.8e-18 2.4e-15 56.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1167_g04049.t1 gi|612009965|ref|XP_007488508.1| PREDICTED: sperm-associated antigen 1 [Monodelphis domestica] 0.0
habu1_s1167_g04049.t1 gi|564259881|ref|XP_006268859.1| PREDICTED: sperm-associated antigen 1 isoform X1 [Alligator mississippiensis] 0.0
habu1_s1167_g04049.t1 gi|557293727|ref|XP_006029329.1| PREDICTED: sperm-associated antigen 1 isoform X1 [Alligator sinensis] 0.0
habu1_s1167_g04049.t1 gi|701323306|ref|XP_009990711.1| PREDICTED: sperm-associated antigen 1 [Tauraco erythrolophus] 0.0
habu1_s1167_g04049.t1 gi|705704429|ref|XP_010127104.1| PREDICTED: sperm-associated antigen 1 [Chlamydotis macqueenii] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 6.9
Venom grand-1 4.2
Pit, infrared sensing 6.1
Nose 17.1
Brain-1 6.3
Eye 7.9
fetal fibroblast 7.0
venom gland-2 5.1
Brain-2 7.1
Spleen 5.0
Lung 4.6
Liver 2.9
Kidney 9.3
Pancreas 6.1
Small intestine 3.8
Large intestine 6.1
Stomach 13.2
heart 0.9
ovary 48.5
cheek muscle 2.0

Transcript
Transcript IDhabu1_s1167_g04049.t1
Definition-
>habu1_s1167_g04049.t1
tttcgtttggggaaaggctgaggggcaagaccagtccgttcatttccacctacctaccttttcttcagggtgttggatcc
tagacgtagttgaaacaactcccagcatctcttgatgtggttgggagtgctataagtgctggtcaaatgtcatcctggtt
gggccatgaaaggacgaaaacatacaaaattcctattgaccatctggactacaaattcattgaaaaatgcactgatgtta
agtatttagaaaagattcttaagatattaaggtcgggtgaagaaggttttttccctcagcttaattcattttgtgaaaac
cgcattgagtctttggctccaaaaagcagagtacttcgaaaagaaaaacatgtagccaatgcttctgattttactactga
agaatggaaaaaaataaatgatgacttgatgagctggattacagaaatgaaagaagatgagtataaaacgcaatatgcta
caactgaagtcaaggaaaacgtggaaaatttaccaccaattcgtagttcagggaaccatctttccttaaatcagaataaa
actgcaaaaacaaagcaaaagaagaaaaatgtaccaagggactacagagaatgggataagtttgatgttgaaaaagaatg
ttccaaaactgaggaccaggaagacaactactctaaaaccagcattaacaataacataaaattaccaaaagcagagatag
acacaatagggatgactacaaaagaaaagacatttgctgctcatcgtgaaaaagaaaaaggtaatgaagcatttgtcata
ggtgactataaagaagcaattgcctactacagtcgagctcagacagaaattaaactccaggactggcagaatgcgcttcg
agactgtgaagctgtgttaaaaatggaaccagaaaatataaaagctcttatccgtcgttccactgtttataataaactac
agaattttaaagcggctgctgaagacttgaggaaagtattacatattgatccaaaaaatgccatagctaaaaaaaagcta
tcagatattgataagaatctgaaagaatcagaacctgtatctcagacccaaagcaaggggaaaagaatattcattgaaga
aatagaagaatcagaagaacaagagagagatgaaggagaatttgtaaatggtgctggaaagagaaagactgcagtgctgg
tgggaagggagagcacaagcaagccggcagaaatgggcaatgtacaaaagaagttcagcagtcgaggaggtgcctggaaa
ccagaccataaagaagcccagaagcccagagacccttcagagaatattaaaaaaggcacatcggaagaaacgatacggga
atctctgcaaggtggtaaaaaggaaataaatggctacctgagcaactgtctaaatggaaatgaaactggggaaggaaaac
caaaggatgtagaatcgtcaacggctggaataagcagttctactctgctgcctgctaatgctgcagaactgaaaactgaa
ggaaatgaattatttaagaatgggcaatttggagaagctatgctgaaatactccagagcaattgaaagtgtgctcagctc
aggaatccaaactccagaggatttgagtattttgtattcaaacagagctgcatgttacctaaaagaagggaattgtgctg
attgtattcaggattgtaacagtgcgctggaactccatccatattctattaagcctcttctacgtcgagcaatggcctat
gaatcaatggaacgataccaacaggcatatgtggattataaaactttattgcaaatagatagtggaatccaggttgcaaa
tgacagtgttaacagtgtagtattggcccatggagctgttataactgatgagaatcctagcattctgctctgggaaaagc
agatgaacacccgaattgtccagaatagcctaactcctcgtttattgactgagttacattccaacaaccaggtcttattt
atacttttcccttcactgcttattactcttttcttcctggcaatccatctccttatttcagctgcttccttctcttcctc
ttcctcctgctggataacgagaaccttaatagatctggatggtccaaattggagggagaagttaccaccaatacctgttg
tcccagtttctgaccagttacactggtgggatggagaaagctttacttcagagttaaaacaaaagaaaactgcaaatatt
tgcagaaatcaactgtcacagattccaagtgataatgcagaagagaaattcaagctatttaagaatcaaggaaatgaatt
tgtgaaaaagggtaaatatgaagaagcattaatgaaatatgacgagtgtataaaattaaattcacaggaaaagactatct
acactaacagggctctttgtttcttgaaactacttaagtatgaagaagccaaaaaggattgtgattatgttctccagata
gatggctctaatataaaagctttatatagaagagctctagcatacaaaggattagagaactatgaagctagtattgaaga
tctgaataaagttcttctaattgattccggtattggtgaagcacagaaggagctagaggaaacaacacaactatttaaac
ttaaacgtgaatttacagccaacaatcagccaaagcaaaggaaaaaaattgaaatccaagaggtaaatgaaccagaggaa
gatgatacagagacgtgttcttcgaagaatacagcaatacacccttgcaatgctaaagaggagcttgaatcaaccatgcc
attgaatagctcagaaaagctaatcatttctaagccatcaaatgcctatgaatttgggcagataatgaacattgtgaatg
ccagtaaggacattgctgcttgtgcagagctcttagcaatgattgagccaaaagatttgccagtattactaagcaacaaa
ctagaaggagatatttttctcatctttattcaagctctgcagtctgatgtgttcagccaaaaccctaatctggtatacca
acatcttttctacctaagtaaagctgaaagatttaaggtagcgcagacacttcttggtaagaatgaaatcgaacaggttc
agcagctactggcttctcttcttaatgcgcaagaccaacaattttctttgaatgatcttgagaatcttaagaaaagcttt
gaactgtaaacagtttgttttaattactccatgcaaatatgcatagtgtttatgtccatcttacaccgagggaaggcaaa
tagttttacctgggttatttaatatgctgcatattttacatatacttcgataatcagctccttcatcttgttgtaaatgt
ttcattctacaattattttatttatgagaatgttccctactctttggcacctgcacttatatcaacaaatagattagaag
taggactggggcttgaacaactcatttagataggaaagaaaaagaatgaaaaatactctgcatttgcttgaggaagaaaa
ccttgagccctgaagacacagccccagaaggccaagcaaatagtctaaaatgttccttttatgaagggatattaagcaaa
tgataatacttatttgaaaagtgttcagacggttatatgtagctgtttttgatttgctgtttttgtttcattttcttcta
gcataggggatttttctaaagaaaaacactgataaaaacggtgattgacactgcaatgaaaatgaataagccccattaaa
taaggaattgtgatcttattttaagtgggcatgtgttgaaagactttgaaagtgtagcatggtgatagcactttgttttt
gcagctggaaaaaaaatggacagtactacagcatatttcaacttcagttttgctttcatttgctgttccagacaaattca
tctggcttatattgagtatggctttcaaaaaaccatgagtcatttcttgtcttacttcttacagaattaacatgctggag
ggttctgaatgtgtacagctgtgtgaaccttttagcagctggttgcagcaggagatgtttgaatctcctctgaattcctt
cctctgaatatatatgaagggagatttctctgagctagtgacttactacagaacagcaaagatgaagcaaaacatgtaat
aaataataaagtaataaatgttttgaagcaatacggctat

Protein
Protein IDhabu1_s1167_g04049.t1
Definition-
>habu1_s1167_g04049.t1
MSSWLGHERTKTYKIPIDHLDYKFIEKCTDVKYLEKILKILRSGEEGFFPQLNSFCENRIESLAPKSRVLRKEKHVANAS
DFTTEEWKKINDDLMSWITEMKEDEYKTQYATTEVKENVENLPPIRSSGNHLSLNQNKTAKTKQKKKNVPRDYREWDKFD
VEKECSKTEDQEDNYSKTSINNNIKLPKAEIDTIGMTTKEKTFAAHREKEKGNEAFVIGDYKEAIAYYSRAQTEIKLQDW
QNALRDCEAVLKMEPENIKALIRRSTVYNKLQNFKAAAEDLRKVLHIDPKNAIAKKKLSDIDKNLKESEPVSQTQSKGKR
IFIEEIEESEEQERDEGEFVNGAGKRKTAVLVGRESTSKPAEMGNVQKKFSSRGGAWKPDHKEAQKPRDPSENIKKGTSE
ETIRESLQGGKKEINGYLSNCLNGNETGEGKPKDVESSTAGISSSTLLPANAAELKTEGNELFKNGQFGEAMLKYSRAIE
SVLSSGIQTPEDLSILYSNRAACYLKEGNCADCIQDCNSALELHPYSIKPLLRRAMAYESMERYQQAYVDYKTLLQIDSG
IQVANDSVNSVVLAHGAVITDENPSILLWEKQMNTRIVQNSLTPRLLTELHSNNQVLFILFPSLLITLFFLAIHLLISAA
SFSSSSSCWITRTLIDLDGPNWREKLPPIPVVPVSDQLHWWDGESFTSELKQKKTANICRNQLSQIPSDNAEEKFKLFKN
QGNEFVKKGKYEEALMKYDECIKLNSQEKTIYTNRALCFLKLLKYEEAKKDCDYVLQIDGSNIKALYRRALAYKGLENYE
ASIEDLNKVLLIDSGIGEAQKELEETTQLFKLKREFTANNQPKQRKKIEIQEVNEPEEDDTETCSSKNTAIHPCNAKEEL
ESTMPLNSSEKLIISKPSNAYEFGQIMNIVNASKDIAACAELLAMIEPKDLPVLLSNKLEGDIFLIFIQALQSDVFSQNP
NLVYQHLFYLSKAERFKVAQTLLGKNEIEQVQQLLASLLNAQDQQFSLNDLENLKKSFEL

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