Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1167_g04051
Locus habu1_scaffold1167 : 360806 ... 440408 : +
To GenomeBrowser habu1_scaffold1167:360806..440408
Genes list of scaffold habu1_scaffold1167

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1167_g04051.t1 3 1 RGS 718 816 1.1e-26 93.2 1.2e-12 8.6e-09 35.5
habu1_s1167_g04051.t1 3 2 RGS 898 1015 1.1e-26 93.2 2.8e-10 2.1e-06 27.8
habu1_s1167_g04051.t1 3 3 RGS 1065 1178 1.1e-26 93.2 3.1e-10 2.3e-06 27.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1167_g04051.t1 gi|602641230|ref|XP_007427420.1| PREDICTED: regulator of G-protein signaling 22 [Python bivittatus] 0.0
habu1_s1167_g04051.t1 gi|637347595|ref|XP_008117700.1| PREDICTED: LOW QUALITY PROTEIN: regulator of G-protein signaling 22 [Anolis carolinensis] 0.0
habu1_s1167_g04051.t1 gi|558159364|ref|XP_006122484.1| PREDICTED: regulator of G-protein signaling 22 [Pelodiscus sinensis] 0.0
habu1_s1167_g04051.t1 gi|564249167|ref|XP_006263664.1| PREDICTED: regulator of G-protein signaling 22 [Alligator mississippiensis] 0.0
habu1_s1167_g04051.t1 gi|557293772|ref|XP_006029348.1| PREDICTED: regulator of G-protein signaling 22 [Alligator sinensis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.8
Venom grand-1 0.1
Pit, infrared sensing 0.8
Nose 0.7
Brain-1 0.8
Eye 0.3
fetal fibroblast 2.3
venom gland-2 0.1
Brain-2 1.2
Spleen 0.6
Lung 0.2
Liver 0.0
Kidney 0.7
Pancreas 0.1
Small intestine 0.1
Large intestine 0.4
Stomach 0.6
heart 0.1
ovary 0.3
cheek muscle 0.1

Transcript
Transcript IDhabu1_s1167_g04051.t1
Definition-
>habu1_s1167_g04051.t1
ggactgttgttctctcccctttcccccgcgctcgccggagaagaatgaggctttaactcaactcgggggagtgggcgtgg
gggggaacagcagggcttctgcagagcccgggcgcgcgtccgcaccatgcgagagaagaggctcaccaccgtgcctccct
gcataagagagaatgaatttgaagagtatttagcaactgacaacatacttgtagatttcttcaatgaatttttgagtctc
ccaacatttgcagaaccaattcaatttaattctgattttggaatttttgaagttgctagtgatgtcccacagtgcatgga
aaaccagctaaaacaaatgcttcgggaacagaaacctcgaaatcccatttatgatgttataaggcagacaaagatgcaaa
cctctttttctaaagatattagcactcccccttcctcggccttcagttttaatccaaattattcaaccatgagtctgaac
cgagaacaagctattgaatggattaaaaagaaaagatttccagcatttttagagagtgattgctactttgaatacagatt
agctaaacttatttcacaggtggaatggagcaaaactgggatcagttttgttatagacaaaacctattatccttggttct
caaaaagtccaccctccatagaaagccctgaggaaaatgaagatgacttgattatgaaaagtttctacgtttctcttggc
caggctactgttactcagacacaggattggtttactctagccaagcaaagtcagaacatgatcactactgattccattac
tcgtcctgtgacatcttctcatgttcgttttttaactgattctccaaagtcattgtctatatgtgaagatataaagtctc
aagaactgtatagctcttcatccattgttaatgctggtatttgcagtggtcacttaggatttgaatccagagttaagaag
aagcccagtttaactgatgtcccacttcttcagaagatagaagccagaagacacagagatgagggttattctttgtcact
tcccgatactccttcacgcactttattaagagcctacttaggacaagactgggatcttacccctcaggagggaaagagtg
aagacttcatccaatatcaagaattggcatcttttcacactttggatgagttttctttcgcctatgttcaatatatacta
aaaaactctgttgcagtagtcactggtcagccacctgaagacagtccttctgacatcaatttcagtaaaacaactagagt
gtttatatatgagttagcaagcagtgaaaagtccatagagccagtctttgaaaagtcttcttttgttgatggaacgattg
atggaacagttgatggaacggatgtgaagagtgaaatttctgaaaaatcagaaaaggacactgaaaccagagctgcttgg
tgtgctaggcacaagacatatgacattggtaacagacatgaatttgaaagatttaaaaaattcatcagaggaactttggg
agaaaaatactggtggctttggatagatattgaacgactgaaggtcctgaacaattttaaaaggcagaaaagacagcttg
atcggatgaaaaaattatacttggcaagcaatggagattattacctgacctttgaagttcttttcaagctcaacctggtg
gatggcgatcaatggaatgtgtataatttaaagtgcattcagtctgaagtagtgaaacctttgcttctttactggggtcc
ccgattttgtgtcactcataaagctgccattcaggccaccgttaccaagctgaaaatctggcatgctcggcaacagaaac
cacgaattgatgtggatcctttcccacagatggtgtccctgctacccctgaggccgaaatcttgcatgccaaaaataaca
tctccatgttatcagagaggagaaactggattaaccccgactttttcaaaaggagcggtgacggagatcagtccccaaag
atctaccaggctgttatctgcagttctacctcagtatcaaactgctgttcagaaagatccttatgacttaataagcttgg
aaaatattaggaaaaggccagcaacagcatgcagcaatgtgtctcatatgacatttagtgatagaatggattacctgaaa
ccacaactagatcgaaaatacacctatgcagaaacgatccctggtaaaatcgccccagatttttccgaactaggaagttc
taaaatggaaagaatgcttcaatctctttacttggagaacagagcaggctacgtcttcaccgacttctgcgagaaatcag
gtgataggctatggaagaacagcacatatttttggtttgaccttcaggattatcatcagcttttctatcaagaaacgctc
catcctttgaaactatgcaagcaagcacaattcctttatgctaattatattgctccgtctgctactttggatattggaat
agaacagtctacaaaaaatgagatttacaaaagaattgatccaccatttgaagatctttttgacctagcagaagaataca
tcctcgccattcttttggtaccatggatgaagatgatagaagaagaccgagaaatctatgggaaggtggagctgatggaa
gaaattcgacagctggactcagtgtactttaaaaagctgcaggctttgcatgcagagggcatttccaagaaggatgaggc
tttggcagttgcagaagttctccagaagtctgagtctattcgacttgtagaatccattgatcaagactattctgaaggtt
tcaaatcatactccattatgaaattgctgaacaacaggacagatttggaacaattccgtatctttctcgagaagcaatca
gcaagtgtggacctcctgtgctggatagacattgagcagttcagaagaatgttacacaaaaataaaatacaacgagatga
aaaatctaaagacattaaaaagaaatatctaaacaagaaatatttctttggacctgacagcccagctacaaaagaagaac
aagagcaggttatgaagtcacgtggaggctgggggcaagtacttcatgaacacgttgctcctgtgatcttgttagacgtt
caaaaatatgcccagaggagattagaaaataagtggttgcctctgttttatacccgtgaagacttgggaacgtggaaaac
acgaaagctacatatgggagaggcagtagaagacattttaattcaggaacaggaaaagaaacaagcaccatggaagcata
agaagaattgggtgatttcgtctaaggacataattactttccgtaaggcgctgatgaatcccatcacagctcttcagttt
caacactttgtatccctgaaaggtgatttattggggaatggagtgatcttctggcaggaggtacagaaatacaaggacct
gtgccattctcactgcagtgaatccattattcaggataagatcacaaccattatcaactgctttattaattctgccattc
cacctgctcttcagattgacatacctcaggaacaagctcaaaagatcattgaacacaggaaagagctaggcccatatata
tttagagaagcacagatgactatttttgcgcttctctttaaattttggccaaagttttgtgaatttcgaggcaatttgat
tgatgaggctattttgccttgcttggaaagagaaaagaagatacagaaatttaaaaaagcaagagaattagaagaaaagg
cacaaaggaagaaaagttctattcctgggaaaacaagttcagctactgattcaaaaatgagtataactgaattttcacca
tctctgagcttctctggattgggccgagagtttttctggtcttattcaaagtacatagaagctcttgaacaagaaagggt
cctcctgcagattcaagaagatttagaaaaaaaatcagtagcagcatctgcttattcaggtctttcatctttcctcgctc
tgaaaagtgatacagccataagctctgacaaatttagtcccccagcaaacttcaacacagcttttgtgaagcaacgttca
ttcccacctaaagatactgcaaaaccatcgaaattttaaggaaactgttgaagaaattatgggtttgcattcacagtggg
acaatttatcagaaataaatgaacataactcactggtttgcccaatttttcagaaaagatatgtaaccaagagaagaaag
aaactaattctggtgcattcagtgccagtgggactttattcctatatattgtagtattatagccttctaaaatttaacag
ctatgttagaatacaattcttatcatctggagacatcaattttacagtgccaaattgggaatcctgtgctattatatact
tgtttttaacgaaggaagaattgttaattaatttacctacaaaatatttgataggtttgcagcttgttgacaaggcctat
atacttcactaggattctgaaatgcaacatgtacttcttggggctaacttcaaggcaatccctcttgcttttgctgtata
gaggtctccagaacaggtgtacaaaacattcctgggaacatcagggctggtccacaggtagagcaatttgtaaggcttca
aaatagcaacatctgtgattctatctgccatattgtttcacagccacatctgattcatattgtaaattacagtgagagct
tgagctcagttgtggatgattgctgctgaaggattcaaatacattagttctttcttccttttgcaatgttcatgttaaac
gatgaagtatgtatcaagaggggaaatatctgtggcccacatgtggtcttttttgatggtttcaacattctccaagaaca
tgtcattcccaaaagggaaaaattgggaccaaatcctgcccctggtccctctgggcatcaaagaggaggaggagaaggag
gaaccacaagaaaaacaacaaatgaagcccttctgcaaaatgattgccttcacctgttacagattatttggtttagattc
atgatacatcattttttggccttgtgtctaagatcagattcaccatgctagaaatttgttttctttgccatatgtcaaac
aactgcactctggattgtttcttttctataacaaggatttatgtcatacattaaaaagaaactcccatttaggtacttaa
ttttttctctagccaaatataatatgaaaccaacaatgtgcccatgttttagatttggactatatttatttgtatgcaat
ccaaacatcaacccattaatcctttatatgtcccccgtgataccttcaagcacctgataaccaaacaacttgtttttctc
attcagtagctccattctgaatcagacttagcagacttattatataaaagatataatccagacatatgtcagggaggata
aactgtgcttgattgatacttggttttgcagaattgtttccacccacgcagtaaaacaatggttcccttgtggttttgat
agaagtggtgtaaagtagatgtcttatttgtctgtcataagaaatatcattgcttgatatcacacagaattttgcatgac
tggttataattcatcccttgcattaccatccctcagttttccagagtagttcacaaaccatgttaatattgatttatcca
atttacagtcagcctttcaaactgaactgaaagagggaggaatatagtgatgatccagtcaagttggggttttctttgta
gtctactttactttaaaggagagagtgaaacgtataattgcatgtttttatttgaaaatcaatggtatttaaaacttttt
taaactttggagtgtgatgctttgtggcatctaaagattagcaaatctattgtggttttctaaagaaaagatattatgct
tttaacattaatacagctgtaattaaggtatattaggtgtaaaagcatttttaatcatagcatgcgcgtgaattagatta
ccaaaacaaggttaattgatatgctcaacaagagttttatacagggcaacttttaataattattatatttggattctggc
actttgaggcttacacaattacaaatgaataatttttcatagcttggtgtccatctgatcaaatacaataaaattatctt
gagtttcataatacaatacatagaaatatttggggaaaagtatttgtaaagaatgaggttagaaagaaatgaatggcaga
cagtaaatacatggacagccattcactaatttgtggctttgttgacaggaagtcatttttcactcttttgtgacattgtg
gttagtcctaataaacatgttaataaaccagcagtttattatttttctcttgaattgtttcagattgttttttgtcttca
tttctccagagacacttgatatgaagccaatcaccaaattataataacctatgaatatagggcattgctaaatgactttt
ttcattaatgtttgcatttctggctaattcagtgcagattttaaaaatcagattggcaagaatatacataattttaaaac
tttcatctagtttagatcctatatttacaaaatatacacttcagactatctattaggctgttgttagcttgtgatagtat
tgggattatttgtcaaaataatcaatacattcaggaatctttattccctgtcccacaaaggtcctcttagaatgtattga
tagtacctgaatcaccactgtttaaatgttcacatgtaagcatccataaagaaaacgtctgagtcaatagtaaatagatt
tctaactttcagaaaatagattttcacttataaaattggattaccatccctcttcattgtctgagctacgtatcctccaa
cttacgttaaatatattttttctacttaattttatgcacttgttatattttttattcttttaaatatatttagtttgcat
tagtttttgttgttgtaaattataattaataaaatcactacaaaaataaaggaag

Protein
Protein IDhabu1_s1167_g04051.t1
Definition-
>habu1_s1167_g04051.t1
MREKRLTTVPPCIRENEFEEYLATDNILVDFFNEFLSLPTFAEPIQFNSDFGIFEVASDVPQCMENQLKQMLREQKPRNP
IYDVIRQTKMQTSFSKDISTPPSSAFSFNPNYSTMSLNREQAIEWIKKKRFPAFLESDCYFEYRLAKLISQVEWSKTGIS
FVIDKTYYPWFSKSPPSIESPEENEDDLIMKSFYVSLGQATVTQTQDWFTLAKQSQNMITTDSITRPVTSSHVRFLTDSP
KSLSICEDIKSQELYSSSSIVNAGICSGHLGFESRVKKKPSLTDVPLLQKIEARRHRDEGYSLSLPDTPSRTLLRAYLGQ
DWDLTPQEGKSEDFIQYQELASFHTLDEFSFAYVQYILKNSVAVVTGQPPEDSPSDINFSKTTRVFIYELASSEKSIEPV
FEKSSFVDGTIDGTVDGTDVKSEISEKSEKDTETRAAWCARHKTYDIGNRHEFERFKKFIRGTLGEKYWWLWIDIERLKV
LNNFKRQKRQLDRMKKLYLASNGDYYLTFEVLFKLNLVDGDQWNVYNLKCIQSEVVKPLLLYWGPRFCVTHKAAIQATVT
KLKIWHARQQKPRIDVDPFPQMVSLLPLRPKSCMPKITSPCYQRGETGLTPTFSKGAVTEISPQRSTRLLSAVLPQYQTA
VQKDPYDLISLENIRKRPATACSNVSHMTFSDRMDYLKPQLDRKYTYAETIPGKIAPDFSELGSSKMERMLQSLYLENRA
GYVFTDFCEKSGDRLWKNSTYFWFDLQDYHQLFYQETLHPLKLCKQAQFLYANYIAPSATLDIGIEQSTKNEIYKRIDPP
FEDLFDLAEEYILAILLVPWMKMIEEDREIYGKVELMEEIRQLDSVYFKKLQALHAEGISKKDEALAVAEVLQKSESIRL
VESIDQDYSEGFKSYSIMKLLNNRTDLEQFRIFLEKQSASVDLLCWIDIEQFRRMLHKNKIQRDEKSKDIKKKYLNKKYF
FGPDSPATKEEQEQVMKSRGGWGQVLHEHVAPVILLDVQKYAQRRLENKWLPLFYTREDLGTWKTRKLHMGEAVEDILIQ
EQEKKQAPWKHKKNWVISSKDIITFRKALMNPITALQFQHFVSLKGDLLGNGVIFWQEVQKYKDLCHSHCSESIIQDKIT
TIINCFINSAIPPALQIDIPQEQAQKIIEHRKELGPYIFREAQMTIFALLFKFWPKFCEFRGNLIDEAILPCLEREKKIQ
KFKKARELEEKAQRKKSSIPGKTSSATDSKMSITEFSPSLSFSGLGREFFWSYSKYIEALEQERVLLQIQEDLEKKSVAA
SAYSGLSSFLALKSDTAISSDKFSPPANFNTAFVKQRSFPPKDTAKPSKF

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