Gene
| Gene Model ID | habu1_s1167_g04052 |
|---|---|
| Locus | habu1_scaffold1167 : 444935 ... 448493 : + |
| To GenomeBrowser | habu1_scaffold1167:444935..448493 |
| Genes list of scaffold | habu1_scaffold1167 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1167_g04052.t1 | 1 | 1 | COX6C | 1 | 65 | 1.2e-16 | 60.2 | 9.1e-21 | 1.3e-16 | 60.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1167_g04052.t1 | gi|602641222|ref|XP_007427416.1| | PREDICTED: cytochrome c oxidase subunit 6C-like [Python bivittatus] | 2.0e-28 |
| habu1_s1167_g04052.t1 | gi|591362306|ref|XP_007056064.1| | PREDICTED: cytochrome c oxidase subunit 6C-like [Chelonia mydas] | 2.0e-09 |
| habu1_s1167_g04052.t1 | gi|585678352|ref|XP_006891171.1| | PREDICTED: cytochrome c oxidase subunit 6C-like [Elephantulus edwardii] | 1.0e-08 |
| habu1_s1167_g04052.t1 | gi|585711246|ref|XP_006900075.1| | PREDICTED: cytochrome c oxidase subunit 6C-like [Elephantulus edwardii] | 2.0e-08 |
| habu1_s1167_g04052.t1 | gi|499016569|ref|XP_004559091.1| | PREDICTED: cytochrome c oxidase subunit 6C-1 [Maylandia zebra] | 2.0e-08 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 261.7 |
| Venom grand-1 | 294.1 |
| Pit, infrared sensing | 300.7 |
| Nose | 313.5 |
| Brain-1 | 319.8 |
| Eye | 238.6 |
| fetal fibroblast | 586.7 |
| venom gland-2 | 368.3 |
| Brain-2 | 454.9 |
| Spleen | 210.4 |
| Lung | 141.0 |
| Liver | 300.3 |
| Kidney | 292.9 |
| Pancreas | 387.8 |
| Small intestine | 273.0 |
| Large intestine | 467.3 |
| Stomach | 576.5 |
| heart | 1470.2 |
| ovary | 220.0 |
| cheek muscle | 956.2 |
Transcript
| Transcript ID | habu1_s1167_g04052.t1 |
|---|---|
| Definition | - |
>habu1_s1167_g04052.t1 cgtgttcctaaaagtgaaggcgttaaggacggacttgagtctgtaggggtcagagaaggcacttcctcctgcttggtgtc gggcgagaaagcttcaatatgtcttctaatttgttgcccaagccacgaatgagagatctcctgggaagacttgcaagaag gaattttatgataggagttactttagtatcaggaagcttttttttcctggagtattttttcattcaagcaaagcaaaata aatacagagatttctacaaaacatttgacttcatgaaagactttgaggacaagaaaaaagcaggagtgtttcaaagtgtg cagccctaatgacatctaataatcataaaacttccttttggaaacaaaataatcgaatattgtgatcaataacgatcacc ttcagtgctggtcctgctatattgtgctcattaaatgaaaactatctcagagtgtgt |
|
Protein
| Protein ID | habu1_s1167_g04052.t1 |
|---|---|
| Definition | - |
>habu1_s1167_g04052.t1 MRDLLGRLARRNFMIGVTLVSGSFFFLEYFFIQAKQNKYRDFYKTFDFMKDFEDKKKAGVFQSVQP |
|