Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1169_g04072
Locus habu1_scaffold1169 : 575160 ... 657562 : +
To GenomeBrowser habu1_scaffold1169:575160..657562
Genes list of scaffold habu1_scaffold1169

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1169_g04072.t1 1 1 DUF1891 164 205 1.7e-17 62.5 2.4e-21 3.5e-17 61.4

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.0
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.0
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s1169_g04072.t1
Definition-
>habu1_s1169_g04072.t1
cgacttacgaccggtttagacctcgacttatgaccggtttagtcctcgacttacgaccggttgggggtcgcggcattaaa
aaggttgagaaccactgttctaaagcaagatttgagttgttggattccatggtcaaatatggttacttccattacctgcc
atatcatgagtggacatgtacaatattccctaaaggtaacagaaggaatatctgtgctgatgttaacttaatgactgcat
tgcttagtgacacaatgtccggtcccaattgtgatgatacaacagtagtggaccttattcaggatgataaggtggaagct
taccgcaaggaggttgaggggttggtgaactggtgtaaggaaaacagcctagttttaaataccggaaagaccaaagagat
cattgtcgatttcacaaaagataggcacagccacacttctctgtgcattaatgattcacctctggagatggttaccagca
tcaaattcctggatgtgcagctaacgagtaggctggtttggtcgctcaacagcgagaaactggtgaagcgggcacagcag
cgcctgcatttcctgcgtcgcatgagaaaagcacatcttccttcccctgtcctgaccactttctacagggggacaactga
gagcatcctgtcatacagcatcacactctggtttggaagcatcactgcttcagacaggaaggcggtgcagagagtgcgtc
ctgtttctgtaccccgagtggcggtgtcggactgttttcgtgccccgcagcccagcatcagcccatttttgtgccccaag
gcacggcagcatcctatttttgtgccccgagatgacaaattttccttacagcagcagaacacttcacagaccttatgttt
taaagatatcatagccactgagctaatgaactccagagtgaaaaacaaagatgtcaccttaaaattacaaattgaagccc
agattccaactgatcaacttataaaccaaaaaataacagaagaggaacaaactaacatcaaagaggactacaaattacaa
attgaagcccagactccaactgatcaacttataagccaaaaaacaacagaagaggaacaaactaacatcaaggaggattc
tacacaacaacaaacacaatttactgaggaccttgacaatcgaactctgaccttaatcacagtacctgcaactccaaaag
caacagaaactgaagaaagcaacattaagacggaggatgccatagatcagcaaacacaacatactgagaacttagacaat
ctagtcaatcaaataacaactacaacaccggatatgacttttcattctagccagacaaaactggaagaagaagaagatca
gactgagcggatgacaaatacttcaaaccaaagatcgagatttgaactattagggcaacaatctaatgattacaaagggg
ccagttcctttgaaaaattgataactggatgttctctcttgattcaaacaacgtgtgtaggaatgaaaggagacccatct
gaggatttaaaggcactgagccgggcccaaaagcatgagaatgggattcagatgaggcagtcacctgagcagcagcaact
gctccgagatgcagctgctggggaactgtccagcatttcagcatcccagcacttcattcagcagtcctggctccatgtga
agagaatgcaaacagctgcacaaacagatgagagctccttaatcagcaaggatatcgagtgaatgaaggggttcaaagta
taaagctaaaaaaaggcatgatggaagaactgtttaactgaaggactgtgttatcagtaaaaaaaaaagaatggactagg
aaaggtcacttacatgaaaattagctgattcaagaaactgtaagaatgaagcctgtgacacatatctccactcccgagaa
ttgcaaatggactgttctcatctgcaagaatttataaaagaactggaccaactagatatacctaaactaagcaacatttc
tcagagtaaacacattagtctagtcatgaata

Protein
Protein IDhabu1_s1169_g04072.t1
Definition-
>habu1_s1169_g04072.t1
MTGLVLDLRPVGGRGIKKVENHCSKARFELLDSMVKYGYFHYLPYHEWTCTIFPKGNRRNICADVNLMTALLSDTMSGPN
CDDTTVVDLIQDDKVEAYRKEVEGLVNWCKENSLVLNTGKTKEIIVDFTKDRHSHTSLCINDSPLEMVTSIKFLDVQLTS
RLVWSLNSEKLVKRAQQRLHFLRRMRKAHLPSPVLTTFYRGTTESILSYSITLWFGSITASDRKAVQRVRPVSVPRVAVS
DCFRAPQPSISPFLCPKARQHPIFVPRDDKFSLQQQNTSQTLCFKDIIATELMNSRVKNKDVTLKLQIEAQIPTDQLINQ
KITEEEQTNIKEDYKLQIEAQTPTDQLISQKTTEEEQTNIKEDSTQQQTQFTEDLDNRTLTLITVPATPKATETEESNIK
TEDAIDQQTQHTENLDNLVNQITTTTPDMTFHSSQTKLEEEEDQTERMTNTSNQRSRFELLGQQSNDYKGASSFEKLITG
CSLLIQTTCVGMKGDPSEDLKALSRAQKHENGIQMRQSPEQQQLLRDAAAGELSSISASQHFIQQSWLHVKRMQTAAQTD
ESSLISKDIE

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