Gene
| Gene Model ID | habu1_s1169_g04073 |
|---|---|
| Locus | habu1_scaffold1169 : 674716 ... 712489 : - |
| To GenomeBrowser | habu1_scaffold1169:674716..712489 |
| Genes list of scaffold | habu1_scaffold1169 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| kappa-type opioid receptor | GO:0005887 GO:0006955 GO:0007626 GO:0019233 GO:0031635 GO:0038048 GO:0046877 GO:0051607 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1169_g04073.t1 | 1 | 1 | 7TM_GPCR_Srsx | 72 | 191 | 3.9e-07 | 29.4 | 1.6e-10 | 6.1e-07 | 28.8 |
| habu1_s1169_g04073.t1 | 1 | 1 | 7tm_1 | 78 | 232 | 2.8026e-44 | 151.1 | 0.0 | 4.2039e-44 | 150.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1169_g04073.t1 | gi|602643648|ref|XP_007428282.1| | PREDICTED: kappa-type opioid receptor [Python bivittatus] | 0.0 |
| habu1_s1169_g04073.t1 | gi|557281967|ref|XP_006023921.1| | PREDICTED: kappa-type opioid receptor [Alligator sinensis] | 0.0 |
| habu1_s1169_g04073.t1 | gi|564245331|ref|XP_006261788.1| | PREDICTED: kappa-type opioid receptor-like [Alligator mississippiensis] | 0.0 |
| habu1_s1169_g04073.t1 | gi|558112257|ref|XP_006112244.1| | PREDICTED: kappa-type opioid receptor [Pelodiscus sinensis] | 0.0 |
| habu1_s1169_g04073.t1 | gi|591379252|ref|XP_007064174.1| | PREDICTED: kappa-type opioid receptor [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 1.4 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.6 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.2 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1169_g04073.t1 |
|---|---|
| Definition | - |
>habu1_s1169_g04073.t1 ttgcgatccagcttgatatcccatctcttctgcatccccagaagtgcaaacctttcatggtgcaaaaatactccaatgcc aagagtgcagaggaatagggaaaggaggcttttcaacttatgagaatatctgctgggaaaccctcgtagttttcctacac ttaagggctggaaggagaatttccccatggaatcaccagtgtacatatttcgtgaagagctgggtcccacctgtccccca ggcttttgcccttttccaagcaggaccagccacagctggcttgcaggctgggaagaatatggcaacagcagtaatggtgg atatgaggacttgcagcagaatcagaccaatatctccccagttattccgatcatcatcacagcagtctactctatggtct ttgtggtgggcctggtgggcaactctctggttatgtttgtcatcataaggtacacaaagatgaagaccgcaacaaacatt tatatctttaatttggctctggcagatgctcttgtcaccacaactatgccttttcaaagtactgagtatttaatgaacac ttggccctttggggatgtgctgtgcaaaatagtaatttcaattgactactataacatgtttacaagcatattcaccctga ccatgatgagtgtagatcgctacattgctgtgtgtcacccagtgaaggccctggactttcgtactcctctgaaggccaag atcatcaatatatgcatctgggttttatcttcttccgtaggcatttcagccatagttcttggaggtaccaaggtcaggga agatacaggcagcactgagtgttctcttcagtttccagatgatgactatatctgataccagatatcagtcaatgtaatat ttatcagtgggagaagtaaaattcgcaaggaactggaatgtaaccagatatttagttttgcgttagctctgctgaatatt gatattgattgactgctagtttagtggttttgcaataagaataaactatctaaaggtgtaatgggga |
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Protein
| Protein ID | habu1_s1169_g04073.t1 |
|---|---|
| Definition | - |
>habu1_s1169_g04073.t1 MESPVYIFREELGPTCPPGFCPFPSRTSHSWLAGWEEYGNSSNGGYEDLQQNQTNISPVIPIIITAVYSMVFVVGLVGNS LVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSTEYLMNTWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYI AVCHPVKALDFRTPLKAKIINICIWVLSSSVGISAIVLGGTKVREDTGSTECSLQFPDDDYIXYQISVNVIFISGRSKIR KELECNQIFSFALALLNIDID |
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