Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s12016_g20719
Locus habu1_scaffold12016 : 6786 ... 11802 : +
To GenomeBrowser habu1_scaffold12016:6786..11802
Genes list of scaffold habu1_scaffold12016

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s12016_g20719.t2 gi|694846310|ref|XP_009464178.1| PREDICTED: coiled-coil domain-containing protein 127 [Nipponia nippon] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 6.0
Venom grand-1 4.6
Pit, infrared sensing 5.4
Nose 4.8
Brain-1 3.8
Eye 5.6
fetal fibroblast 4.2
venom gland-2 5.0
Brain-2 4.7
Spleen 3.5
Lung 4.1
Liver 7.4
Kidney 5.9
Pancreas 8.1
Small intestine 2.8
Large intestine 3.1
Stomach 4.3
heart 5.8
ovary 7.9
cheek muscle 15.4

Transcript
Transcript IDhabu1_s12016_g20719.t1
Definition-
>habu1_s12016_g20719.t1
agggcgtagtagctgttaccgaggttttggaatattcttttaccagaccttctggtcgtgggttttctttttacctttgt
ttaatgtccgtgaagattttttggtttgcctatgaataatttaaataaccctcctccttactggaacattcagcctaatg
caagaaataatgaagatcatggaagcaaatggaattatgctttgttggttccaatgctgggactggctgccttccgttgg
atttggtccagagaatctaagaaagaaatagaaaaagagaaaagaaatgtctatagaaaattgtcttttgtacagaaaga
gcttgaatctaaatatcgcgacataattatagaaaaccgtagaatggttgcccacttggaattagaattggagaaagaac
ggaacagaaccctaagttatcgcaacgcactaatctctcagagttacaaattggtagaagaaagaagaattttggaacaa
gagcgcacaaaggtagaacaagagaaacggattctgcagcactctggtgctgcaggtgctttgtataagaactgcttgga
gaaggaagatcaatggcaaacaaaagccactattttactgaaagagtttgaagaagctttaatggaaaggcaagatatgt
attgcagccttgtactgccaagatatcatcggttggcagtggaaaaaaaaatgctagccaaagcaacaactgatccaatt
ggtttggaattggaactggaagctggactgaaagatattttcagatatgataccttttgcagcaatttattaaataccaa
taaaaatcaaaatggaaagctcatgtggatctaccttcgatattgggaattatctgttgaagtcagaaaatttaagaagg
cagaaaaaatatttttgggaaaaactgcctaaagccaggccatccctagcttgtattatatctgttaaactttaacccac
agaatcttcatgctgatttgtgatatccatataactttgtgagatatatatcagtatctttagttaactgtcataagtaa
cactcatcatttaataataccagtctttgatcaaatatatattggatgttaccatactaatgtatagtaactaaatacct
atggtttttgtattagtgctattatgttcaataggatttgtttaaaaatggtatttctacaattatttctatgctttcac
ttttttattcctcagaccctcaaatacaggtagtccttggcatacaactataatggagcctgcccattaaaatcatatgt
tgaaatggttgta
Transcript IDhabu1_s12016_g20719.t2
Definition-
>habu1_s12016_g20719.t2
agggcgtagtagctgttaccgaggttttggaatattcttttaccagaccttctggtcgtgggttttctttttacctttgt
ttaatgtccgtgaagattttttggtttgcctatgaataatttaaataaccctcctccttactggaacattcagcctaatg
caagaaataatgaagatcatggaagcaaatggaattatgctttgttggttccaatgctgggactggctgccttccccaga
aacataggagcctgaatttctcctgtgaacctcctccctctttcacagtggactaaaatgtggagacaactagctctgtt
cctatcagctatctcctgtgtggaccagaaacagaattctgcaaaagaatgttggatttggtccagagaatctaagaaag
aaatagaaaaagagaaaagaaatgtctatagaaaattgtcttttgtacagaaagagcttgaatctaaatatcgcgacata
attatagaaaaccgtagaatggttgcccacttggaattagaattggagaaagaacggaacagaaccctaagttatcgcaa
cgcactaatctctcagagttacaaattggtagaagaaagaagaattttggaacaagagcgcacaaaggtagaacaagaga
aacggattctgcagcactctggtgctgcaggtgctttgtataagaactgcttggagaaggaagatcaatggcaaacaaaa
gccactattttactgaaagagtttgaagaagctttaatggaaaggcaagatatgtattgcagccttgtactgccaagata
tcatcggttggcagtggaaaaaaaaatgctagccaaagcaacaactgatccaattggtttggaattggaactggaagctg
gactgaaagatattttcagatatgataccttttgcagcaatttattaaataccaataaaaatcaaaatggaaagctcatg
tggatctaccttcgatattgggaattatctgttgaagtcagaaaatttaagaaggcagaaaaaatatttttgggaaaaac
tgcctaaagccaggccatccctagcttgtattatatctgttaaactttaacccacagaatcttcatgctgatttgtgata
tccatataactttgtgagatatatatcagtatctttagttaactgtcataagtaacactcatcatttaataataccagtc
tttgatcaaatatatattggatgttaccatactaatgtatagtaactaaatacctatggtttttgtattagtgctattat
gttcaataggatttgtttaaaaatggtatttctacaattatttctatgctttcacttttttattcctcagaccctcaaat
acaggtagtccttggcatacaactataatggagcctgcccattaaaatcatatgttgaaatggttgta

Protein
Protein IDhabu1_s12016_g20719.t1
Definition-
>habu1_s12016_g20719.t1
MNNLNNPPPYWNIQPNARNNEDHGSKWNYALLVPMLGLAAFRWIWSRESKKEIEKEKRNVYRKLSFVQKELESKYRDIII
ENRRMVAHLELELEKERNRTLSYRNALISQSYKLVEERRILEQERTKVEQEKRILQHSGAAGALYKNCLEKEDQWQTKAT
ILLKEFEEALMERQDMYCSLVLPRYHRLAVEKKMLAKATTDPIGLELELEAGLKDIFRYDTFCSNLLNTNKNQNGKLMWI
YLRYWELSVEVRKFKKAEKIFLGKTA
Protein IDhabu1_s12016_g20719.t2
Definition-
>habu1_s12016_g20719.t2
MWRQLALFLSAISCVDQKQNSAKECWIWSRESKKEIEKEKRNVYRKLSFVQKELESKYRDIIIENRRMVAHLELELEKER
NRTLSYRNALISQSYKLVEERRILEQERTKVEQEKRILQHSGAAGALYKNCLEKEDQWQTKATILLKEFEEALMERQDMY
CSLVLPRYHRLAVEKKMLAKATTDPIGLELELEAGLKDIFRYDTFCSNLLNTNKNQNGKLMWIYLRYWELSVEVRKFKKA
EKIFLGKTA

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