Gene
| Gene Model ID | habu1_s1233_g04242 |
|---|---|
| Locus | habu1_scaffold1233 : 1 ... 11830 : + |
| To GenomeBrowser | habu1_scaffold1233:1..11830 |
| Genes list of scaffold | habu1_scaffold1233 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| adenylosuccinate lyase | EC:4.3.2.2 GO:0004018 GO:0006144 GO:0006189 GO:0006522 GO:0006531 GO:0044208 GO:0070626 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1233_g04242.t1 | 1 | 1 | Lyase_1 | 9 | 68 | 5.2e-08 | 32.4 | 1.4e-11 | 1.0e-07 | 31.4 |
| habu1_s1233_g04242.t1 | 1 | 1 | ADSL_C | 138 | 216 | 4.3e-13 | 49.0 | 1.4e-16 | 1.0e-12 | 47.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1233_g04242.t1 | gi|602626225|ref|XP_007420073.1| | PREDICTED: adenylosuccinate lyase isoform X2 [Python bivittatus] | 0.0 |
| habu1_s1233_g04242.t1 | gi|602626223|ref|XP_007420072.1| | PREDICTED: adenylosuccinate lyase isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1233_g04242.t1 | gi|704238452|ref|XP_010159670.1| | PREDICTED: adenylosuccinate lyase, partial [Eurypyga helias] | 0.0 |
| habu1_s1233_g04242.t1 | gi|698401867|ref|XP_009809010.1| | PREDICTED: adenylosuccinate lyase, partial [Gavia stellata] | 0.0 |
| habu1_s1233_g04242.t1 | gi|694637837|ref|XP_009477466.1| | PREDICTED: adenylosuccinate lyase, partial [Pelecanus crispus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.6 |
| Venom grand-1 | 33.9 |
| Pit, infrared sensing | 13.8 |
| Nose | 10.3 |
| Brain-1 | 5.8 |
| Eye | 9.6 |
| fetal fibroblast | 15.2 |
| venom gland-2 | 23.7 |
| Brain-2 | 7.4 |
| Spleen | 12.3 |
| Lung | 24.6 |
| Liver | 4357.9 |
| Kidney | 633.8 |
| Pancreas | 28.4 |
| Small intestine | 65.3 |
| Large intestine | 24.1 |
| Stomach | 52.8 |
| heart | 28.0 |
| ovary | 16.6 |
| cheek muscle | 46.5 |
Transcript
| Transcript ID | habu1_s1233_g04242.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04242.t1 gacagacatatagtcgcaaagtagatattgaagttctctctgttctagcaagtcttggggcaactgtacataagttatgt actgatattcgccttctggccaatctcaaagaaatagaggaaccttttgagaaagaacaaattggttcaagtgccatggc ttataaacggaatcccatgcgttcagaacgttgttgcagtctagctcgccatcttatgattcttgtcctggatccccttc agacagcctctgtgcaatggtttgagcgcacattggatgacagtgcaaacaggcgtgtatgtttagctgaggctttcctt actgctgatattatactcagtaccctgcaaaatatctctgaaggacttgtagtataccctaaggtaattgcaaggcatat agaacaagagttgcctttcatgtccacagaaaatatcatcatggctatggtgaaagctgggggaaatcgccaggaatgtc atgagaagataagggttctgtcccagcaggcagctgctgttgtgaagcaagaaggaggtgataatgacctcattgcacga attcgtgctgatccttatttcagccctatccatgggcaattggaaactctcttggagcccacatccttcactggtcgtgc ttcccaacagggtcccccagcggaacaaaaccgaacgcggaagacggagctcaccttccagcgtccgtggcggctgcatt ggcaaactggaagaggagatttgatctcatgtatcctgaaaaacattgaatgtgaaggatggtaaatagtacactggagg ctggtgacagggtgaatgaataaagatgaaatcataaagcaaatatataaaagaaaagcaaatacaggaagagtaaaaaa agtcatggctagagatcttaaaatagatttaaagaataaaatgaattaaatagaaaatggat |
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Protein
| Protein ID | habu1_s1233_g04242.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04242.t1 QTYSRKVDIEVLSVLASLGATVHKLCTDIRLLANLKEIEEPFEKEQIGSSAMAYKRNPMRSERCCSLARHLMILVLDPLQ TASVQWFERTLDDSANRRVCLAEAFLTADIILSTLQNISEGLVVYPKVIARHIEQELPFMSTENIIMAMVKAGGNRQECH EKIRVLSQQAAAVVKQEGGDNDLIARIRADPYFSPIHGQLETLLEPTSFTGRASQQGPPAEQNRTRKTELTFQRPWRLHW QTGRGDLISCILKNIECEGW |
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