Gene
| Gene Model ID | habu1_s1233_g04245 |
|---|---|
| Locus | habu1_scaffold1233 : 47643 ... 119695 : - |
| To GenomeBrowser | habu1_scaffold1233:47643..119695 |
| Genes list of scaffold | habu1_scaffold1233 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mkl myocardin-like protein 1 isoform x2 | GO:0003779 GO:0043066 GO:0044424 GO:0045944 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1233_g04245.t1 | 3 | 1 | RPEL | 123 | 145 | 4.5e-27 | 92.6 | 5.4e-11 | 4.0e-07 | 29.1 |
| habu1_s1233_g04245.t1 | 3 | 2 | RPEL | 166 | 191 | 4.5e-27 | 92.6 | 2.1e-12 | 1.6e-08 | 33.6 |
| habu1_s1233_g04245.t1 | 3 | 3 | RPEL | 210 | 233 | 4.5e-27 | 92.6 | 1.0e-12 | 7.7e-09 | 34.6 |
| habu1_s1233_g04245.t1 | 1 | 1 | SAP | 492 | 524 | 3.0e-12 | 45.7 | 9.2e-16 | 6.8e-12 | 44.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1233_g04245.t1 | gi|602626235|ref|XP_007420078.1| | PREDICTED: MKL/myocardin-like protein 1, partial [Python bivittatus] | 0.0 |
| habu1_s1233_g04245.t1 | gi|637301199|ref|XP_008108941.1| | PREDICTED: MKL/myocardin-like protein 1 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s1233_g04245.t1 | gi|530626151|ref|XP_005302612.1| | PREDICTED: MKL/myocardin-like protein 1 isoform X3 [Chrysemys picta bellii] | 0.0 |
| habu1_s1233_g04245.t1 | gi|530626149|ref|XP_005302611.1| | PREDICTED: MKL/myocardin-like protein 1 isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s1233_g04245.t1 | gi|530626147|ref|XP_005302610.1| | PREDICTED: MKL/myocardin-like protein 1 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.5 |
| Venom grand-1 | 3.7 |
| Pit, infrared sensing | 5.6 |
| Nose | 6.3 |
| Brain-1 | 6.3 |
| Eye | 4.8 |
| fetal fibroblast | 14.0 |
| venom gland-2 | 10.9 |
| Brain-2 | 6.1 |
| Spleen | 12.1 |
| Lung | 9.0 |
| Liver | 3.2 |
| Kidney | 6.9 |
| Pancreas | 2.9 |
| Small intestine | 6.9 |
| Large intestine | 6.4 |
| Stomach | 7.4 |
| heart | 6.1 |
| ovary | 37.3 |
| cheek muscle | 20.6 |
Transcript
| Transcript ID | habu1_s1233_g04245.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04245.t1 aacggtggtactagtgagagcggtctctgcgtcttcagacaactttttcgtcgggggaggtgttgactttggaaggcaag gacgaccgctaggatgtattcgtgatcaggtgagtggaaagaggctgcgaagagaacggagcgactgcttatccctccca ctcttggactcttccatgtatggggcagggaaccgcccctctgaaaaaacacaagcccgggctgctcggggtttggctgg ggtcgccgcggtccttccgtttctcgcgatgtgagtgaggaccgtggtgagccgccgcccttcgtcctgggaacctcccg aatgaacagccgctgccggcggacactctttaatttttccttcagtgagtcagaggctgtcatcacgaaagccaaagtgg atttctctgacgtcctgtgcctgcccccttccgtcgttgctggaaatgggctggacggaggaggggttggcgagaatgaa gatgaaacactctcgatgtctctttcggctgcaccaagcccacaaagtgaagctgttgccaatgaactgcaggaactttc cttgcaacccgagctgactgtaggccttcatcctggccggaaccccaatcttcctcctcttagtgagaggaagaatgatt ggcccgaaggagaggagtgtagtatttttattcatggaactattaaagtgctacagttgaagctccagcagcgacggaca cgtgaagagctggttagtcaagggatcatgcctcctctgaaaagtccagctgcatttcatgaacagagaagaagtttgga acgggccaggacagaggattacttgaaacggaagatccggtcccgaccagagaggtctgagttggtgaggatgcacattc tagaagagacctctgctgaaccttctcttcaggccaagcagctgaagttgaagcgggctagattggctgatgatctcaat gagaagattgcccagagaccaggccccatggaattggtggagaaaaatattctgcctgtggaatcaagcttgaaggaagc cctcattgtaggtcaagtggactatcctaagttagcagataattcctcctttgatgaagacagcagtgatgctctgtctc cagaacaaccggctagccatgaatcccaggcatctgtgccatccccaatggatgctctgatgagtgatttagttcctact cccacagtggcatcccctgctcagattgtgtgccagttaaaaatcagcacagactgcactgagacaacttatgtgtctga acagcctccaacccccttgccacagccgccacctccagtgcctctgaatctcactaatgggattgttcctgctgctgcca aacctcttccaactcttataaagcaaagccagccaaaatcttcaggtgagaagtcccagcgtagcaaaaaatccaaggag ccgaaaccaaaagtcaagaagctgaaatatcaccaatatattccaccggaccaaaaacaggataaaggagctccccccat ggattcatcttatgccaaaatcctgcagcaacaacagctctttttacagctccagatccttaatcaacagcaccaacagc actacaactatcaaaccatcctcccagctccaccaaagcctttaggagaacagaatggcaacagcaccccagccttgcgt aatctttccacggctgccagcaacgcctcttctctttcttctagttctaatgggctcttgcgacaaaatagcaattctcc agtaggcaaacctggggctctccctactaaccttgatgacatgaaggtggcagagctaaagcaagagttgaagttaaggg cattgcctgtttcgggtaccaagacagatttaattgagcggctcaaggcttatcaagagcagaatggtataaccagccga gtaattgctgctccgaaggctaacacagcaattctcccgaagactactgaagtggtggtaactttcccagctgctcggct gagtacaggtcctgcacttgtcaatacaggccttacttcagcagaggttgttgtagccactgtcacgggcaatggggtca tgaagtttgggagcacaggctcaactcctcctgtgtcacccactccctctgaacgttctctgataagtgctggagatgag aattcaatcagtggtgatacctttggggagatggtgacttctcccctgactcagcttactctacaagcatcaccagtcca atttttggtaaaagaagagagttccaaaggtaacacttgtagcacaaatgcaatgtcacgggtagagtctagcatgaaca acaacaaagacatggaggtccaggataaagaccagatgctgcaggagaaagataagcagattgaggaactcacccggatg ctaaaacagaaacagcagttggtggagatgctaaagctgcagctggagaaagaaaagagatctcaacaaccgctgtcagc tacagttgttggagaagaagccagagctacagtctgtgagccctctatttttggcacctctgtcaagaatgaaaaaggct ttgtgagttgccaatctgtggagcagctgaactgccaaattgaccaactaagacccacacagaccaccagccaaatggag acatcagatacagatttagtgccaaagaaagcagtgatggtgaagcaggaggtgctagctgctgaaactgagccaccatg tcagacctcatgttttttccttggacaacaagctggaggtttcagtgatttcatcaagggagcttccccccctaccctca tcacagattccacagggactcacatagtcctcactgtgaccaatcagaatgctgaaaggcagaacctctcacctcaggag aaagtgggaagcagttcgttgccattgaaaagaatatcatctccatctacaatagcacccagcaagccacttataaagaa ctctccatcatctcctgaacctccaccaaaggagtccacccaaaagcgtcagaagtcaggtctgcaaatggtcactggac agctgccacaaacaatcttatctttttctgcatctcccaacttgcagccgttcttcctgaacggcttccacaaaggaccg ccgaatgccagagttcctgataaaactggccagtccagtgagacaaaaaagtttctctcacaaccaagttctccagctcc tccttctccaccccatatggaccttgagcagcagaagcagagcccttccttctttggcactttgccaccactgcttctcc ctgccacctcagttgtgatgaaagaaccaccaggctacgaggaggctgtgaagcagcaacccaagtcctccgaggagaat ggctgctcaagtcagcaaatggatgatttgtttgatattttaattgaacatggagagatttcagctcaattcaaagaatc tccctcagcaaagaaagatcccactgttaccccaaaatgcccttctccatccagcaatcatcattcctcagagctttgtc tgcaggggcacccaagctccgttaatccaccaggcagactggaagacttcttagagagtactactggcctctctttgttg acggcagtccctgatggaaccgagcccctaattgatctctacagtgagatgctaagcagttcagctatcctggaccatcc atcctcacctatggacacatcagaattgcactttgcccctgaatctgctgggggaccaggtttggacttggcagaaccca atttggacagcatggattggttggagctgtcaggagggccagtgatgagccttacgcccctcagttctgcaacccctagc ctcttctccacagatttccttgatggacatgatttgcagctgcactgggattcttgcttataactttttgaccaagtaaa ctgaagggagtacaggtgggtgtagcagatgagcaagaatttaagtaaacagtgcatctaatgaacctccttttttctcc ccccccttcccaattttgaccagtttttgtaaagctagagccaagggcaagtacccatgatgttttctgaatgaaaattc aatctcaggaaagcttccactttttccagtggtttgtcaaaatgtggctctttcctcaaacatttagcaattgcatcaga gttctatgagtaactgcagatacttcaacataaaggagaagttggagcagttctaggcaaaggatccagaaaaattcatt ggcaaacacatttctccttgctggagattaatctatctaattggaaagcattaaaaaaattggaaaaagttaatttgtcc acactgtaaagattttcacttagaatatgactcatctgggaaaggaaatggggaattaggatgaattcatactgaagttt acaatcaactcggagggttacagtctagttaaaatagcctttttcttgataatgctgtagtatatgtgcttcctgcctac taagaaagctaaatccacattatatcataacttaagagaacagctcttgctgtttaacattgttctggattgccccagtg taaaataaacagagggccaattattctggttctagtattttaccagccaagatttgcaatgaatcaagacagttgtacaa agtacagtgttttcagcttcctgtaattcctttaaaaattattctaatggttccagttatggaatatagtgctgttttga ggaaatggag |
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Protein
| Protein ID | habu1_s1233_g04245.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04245.t1 MNSRCRRTLFNFSFSESEAVITKAKVDFSDVLCLPPSVVAGNGLDGGGVGENEDETLSMSLSAAPSPQSEAVANELQELS LQPELTVGLHPGRNPNLPPLSERKNDWPEGEECSIFIHGTIKVLQLKLQQRRTREELVSQGIMPPLKSPAAFHEQRRSLE RARTEDYLKRKIRSRPERSELVRMHILEETSAEPSLQAKQLKLKRARLADDLNEKIAQRPGPMELVEKNILPVESSLKEA LIVGQVDYPKLADNSSFDEDSSDALSPEQPASHESQASVPSPMDALMSDLVPTPTVASPAQIVCQLKISTDCTETTYVSE QPPTPLPQPPPPVPLNLTNGIVPAAAKPLPTLIKQSQPKSSGEKSQRSKKSKEPKPKVKKLKYHQYIPPDQKQDKGAPPM DSSYAKILQQQQLFLQLQILNQQHQQHYNYQTILPAPPKPLGEQNGNSTPALRNLSTAASNASSLSSSSNGLLRQNSNSP VGKPGALPTNLDDMKVAELKQELKLRALPVSGTKTDLIERLKAYQEQNGITSRVIAAPKANTAILPKTTEVVVTFPAARL STGPALVNTGLTSAEVVVATVTGNGVMKFGSTGSTPPVSPTPSERSLISAGDENSISGDTFGEMVTSPLTQLTLQASPVQ FLVKEESSKGNTCSTNAMSRVESSMNNNKDMEVQDKDQMLQEKDKQIEELTRMLKQKQQLVEMLKLQLEKEKRSQQPLSA TVVGEEARATVCEPSIFGTSVKNEKGFVSCQSVEQLNCQIDQLRPTQTTSQMETSDTDLVPKKAVMVKQEVLAAETEPPC QTSCFFLGQQAGGFSDFIKGASPPTLITDSTGTHIVLTVTNQNAERQNLSPQEKVGSSSLPLKRISSPSTIAPSKPLIKN SPSSPEPPPKESTQKRQKSGLQMVTGQLPQTILSFSASPNLQPFFLNGFHKGPPNARVPDKTGQSSETKKFLSQPSSPAP PSPPHMDLEQQKQSPSFFGTLPPLLLPATSVVMKEPPGYEEAVKQQPKSSEENGCSSQQMDDLFDILIEHGEISAQFKES PSAKKDPTVTPKCPSPSSNHHSSELCLQGHPSSVNPPGRLEDFLESTTGLSLLTAVPDGTEPLIDLYSEMLSSSAILDHP SSPMDTSELHFAPESAGGPGLDLAEPNLDSMDWLELSGGPVMSLTPLSSATPSLFSTDFLDGHDLQLHWDSCL |
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