Gene
| Gene Model ID | habu1_s1233_g04252 |
|---|---|
| Locus | habu1_scaffold1233 : 398304 ... 401695 : - |
| To GenomeBrowser | habu1_scaffold1233:398304..401695 |
| Genes list of scaffold | habu1_scaffold1233 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1233_g04252.t1 | 1 | 1 | Dimer_Tnp_hAT | 104 | 155 | 4.8e-07 | 29.3 | 2.4e-10 | 8.9e-07 | 28.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1233_g04252.t1 | gi|530660222|ref|XP_005315155.1| | PREDICTED: zinc finger protein 572-like isoform X1 [Chrysemys picta bellii] | 1.0e-19 |
| habu1_s1233_g04252.t1 | gi|530660224|ref|XP_005315156.1| | PREDICTED: zinc finger protein 3-like isoform X2 [Chrysemys picta bellii] | 1.0e-19 |
| habu1_s1233_g04252.t1 | gi|641785388|ref|XP_008174928.1| | PREDICTED: uncharacterized protein LOC101952564 [Chrysemys picta bellii] | 4.0e-18 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.0 |
| Stomach | 0.2 |
| heart | 0.9 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1233_g04252.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04252.t1 agtcaaggactacccaaccggtcctgctgattctttgcaaaaaaaatacaatgagcagttttttggaatgaaagttttat ttgccttacgtaaaaaacatttgcctgagaatgccgtgcaaaagttcaagaaagaagccatcaacatgtatcaaagagcc attgcgtacctagaaaagtggtataatttcaccgattcagtatatgagatgctaagttgtttcaatctaattgatcgcaa taatcctccaactttagaagaaatgacgaacatctggttattatcaccatggcgagaagaacttccacccaacactctct tcgatgaaatttctgccttagaagaactttatgttcatctgcagggcgattcatcccttgaaaagtggacgtactttttc aagaaagagccagctccaaatttaatgaaactgttccagtattgtgcatcaattccggtatcaaatgcaaacgttgaacg aattttcagcgtcatgggaaatttgtggactgacgaacgtaaccgactgcttgtaccatcagtttgaagtgaagtttgta tattttttaatatttctcaacgttgtactgaaattaaagaattattccttaaacacaaag |
|
Protein
| Protein ID | habu1_s1233_g04252.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04252.t1 MKVLFALRKKHLPENAVQKFKKEAINMYQRAIAYLEKWYNFTDSVYEMLSCFNLIDRNNPPTLEEMTNIWLLSPWREELP PNTLFDEISALEELYVHLQGDSSLEKWTYFFKKEPAPNLMKLFQYCASIPVSNANVERIFSVMGNLWTDERNRLLVPSV |
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