Gene
| Gene Model ID | habu1_s1233_g04253 |
|---|---|
| Locus | habu1_scaffold1233 : 410101 ... 428555 : - |
| To GenomeBrowser | habu1_scaffold1233:410101..428555 |
| Genes list of scaffold | habu1_scaffold1233 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1233_g04253.t3 | 1 | 1 | RanGAP1_C | 434 | 604 | 0.0 | 263.7 | 0.0 | 0.0 | 262.6 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.2 |
| Venom grand-1 | 2.4 |
| Pit, infrared sensing | 4.9 |
| Nose | 4.9 |
| Brain-1 | 4.2 |
| Eye | 4.0 |
| fetal fibroblast | 21.3 |
| venom gland-2 | 11.0 |
| Brain-2 | 4.3 |
| Spleen | 3.0 |
| Lung | 3.2 |
| Liver | 1.2 |
| Kidney | 2.0 |
| Pancreas | 1.0 |
| Small intestine | 1.5 |
| Large intestine | 2.9 |
| Stomach | 2.8 |
| heart | 3.6 |
| ovary | 37.0 |
| cheek muscle | 4.9 |
Transcript
| Transcript ID | habu1_s1233_g04253.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04253.t1 cgcacgcagaagggcggacagttgattagcttgacttattcgagggttgttgaatctatcccatctgatattagcaacag ttggcacactcaaaaaatggcatcagaagatataactaagcttgcagaatcacttgctaaaacccaagtgggtggaggtc agctgagctttaaaggcaaaagtttgaaactcaatactgcagaagatgctgaagaggtgatcaaagagattgaggagttt gatgggctagaagccctgcgtttggaaggaaatactgtgggggttgaagcagcaaaagtcattgccaaggctctggagaa caaatctcagctcaagaggtgtcattggagtgatatgttcaccgggagactgagatctgagattccccctgctttgattt ctcttggagaagccctcatttctgctggctgccaacttgtagagctggatctgagtgataatgcctttggaccagatgga gtccgtggatttgaggcattgctgaagagtcctacctgttttactctgcaggaactcaagttaaacaactgtggcatggg cattggtggtggcaagatcttagcaggagctctgaaagaatgtcacaggaaatcaactgctcgaagcaagccattggctc tgaaagtatttatggctggcaggaaccgtctggaaaatgatggtgcaactgctcttgctgaggcatttgcagtgattggg actttggaagacatccatatgccacagaatggaatcactcatccaggaattacagccttagctgaggcctttgctgtcaa tcccctgctgagagtgattaatttgaatgataatactttcactgagaagggagctgtggctatggcagaaaccttaaaga aactccgccaagtggaaacaatcaactttggggattgtctggtgcgttcaaaaggtgctgttgccattgctgaagctgtc agtgaaggtcttcataaactaaaggaactcaacttatccttctgtgagatcaagttagatgctgcacttataattgctga agctactgaggacaagtcagtgctggagaagttagatctcaatggcaattattttggagaagaaggctgtgaacagctcc aggagattcttgaaagtttcaatatggcagatgtcctaggctccctgagtgatgatgatggagaaaatggagaagaggag gaagaggaagaagaagaagaagaggaggaggaggaagaggaggaggaagaagaagaggaggaggaagaggaagaggaaga agagcctcttcaggtgcaggagaggggacagggagaacaagaaccccttacacctaaaaaaatcttaaaggaacatgatt ctacaccaccattatcttctccttctcttcctcctgttgatgttggcacctttctagctttcccatctccagagaaattg ttgcgacttggccccaagtgttcgactttgataactcagcagacagatacatctgacacagaaaaagttgttactgtttt ccttaagatctcttctgtcttcaaagatgagacagtagtaaaaacagcagtgacggaaacaacagatgccttgatgagag aagctttttcatcagccaacttcaattctgatgctttcataacaagtgttttgattcacatgggattgctaaagagtgaa gagaaaatcagggctgttccgagtctttatggccctctaatgacactgaaccacgtggtccagcaggattattttcctaa gtcccttgtcccaattctcttggcctttgtcacaaagcctaaccgtgctttggattcctgctcttttgctcgacacttgc tattacagacactccaccaattgtaacccagaggccatgttagttttgtcttggttactttttttaacccaggacttctg tttctcattcattgttcttgaggtttagaacttatcttcaaatatatttgttggactactcttcggaggtaacagcaaag gtctgaagcttccttgcaagtgcattatgttatgagcctagtggggaggttgttttcctccagatgcaggccatcacaag acatttttattatttcttgctcttagtttcaggctattctgtggcaatgtagtatatttttttgaccaagaatatttcat atggaatccttcaccattactcattgagctaataagctcaatactccttcaccattactcatttccactaataagattac tggtggcctgcaaatgactgttagtgaaaactgccttacaaatataaatctgcctaattaaaatagtagttcagaataaa tgtaatcaattttgactgtcct |
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| Transcript ID | habu1_s1233_g04253.t2 |
| Definition | - |
>habu1_s1233_g04253.t2 cgcacgcagaagggcggacagttgattagcttgacttattcgagggttgttgcaagctttcagcctagtatttaactgtt cagtggcatattatcatgtaagaatctatcccatctgatattagcaacagttggcacactcaaaaaatggcatcagaaga tataactaagcttgcagaatcacttgctaaaacccaagtgggtggaggtcagctgagctttaaaggcaaaagtttgaaac tcaatactgcagaagatgctgaagaggtgatcaaagagattgaggagtttgatgggctagaagccctgcgtttggaagga aatactgtgggggttgaagcagcaaaagtcattgccaaggctctggagaacaaatctcagctcaagaggtgtcattggag tgatatgttcaccgggagactgagatctgagattccccctgctttgatttctcttggagaagccctcatttctgctggct gccaacttgtagagctggatctgagtgataatgcctttggaccagatggagtccgtggatttgaggcattgctgaagagt cctacctgttttactctgcaggaactcaagttaaacaactgtggcatgggcattggtggtggcaagatcttagcaggagc tctgaaagaatgtcacaggaaatcaactgctcgaagcaagccattggctctgaaagtatttatggctggcaggaaccgtc tggaaaatgatggtgcaactgctcttgctgaggcatttgcagtgattgggactttggaagacatccatatgccacagaat ggaatcactcatccaggaattacagccttagctgaggcctttgctgtcaatcccctgctgagagtgattaatttgaatga taatactttcactgagaagggagctgtggctatggcagaaaccttaaagaaactccgccaagtggaaacaatcaactttg gggattgtctggtgcgttcaaaaggtgctgttgccattgctgaagctgtcagtgaaggtcttcataaactaaaggaactc aacttatccttctgtgagatcaagttagatgctgcacttataattgctgaagctactgaggacaagtcagtgctggagaa gttagatctcaatggcaattattttggagaagaaggctgtgaacagctccaggagattcttgaaagtttcaatatggcag atgtcctaggctccctgagtgatgatgatggagaaaatggagaagaggaggaagaggaagaagaagaagaagaggaggag gaggaagaggaggaggaagaagaagaggaggaggaagaggaagaggaagaagagcctcttcaggtgcaggagaggggaca gggagaacaagaaccccttacacctaaaaaaatcttaaaggaacatgattctacaccaccattatcttctccttctcttc ctcctgttgatgttggcacctttctagctttcccatctccagagaaattgttgcgacttggccccaagtgttcgactttg ataactcagcagacagatacatctgacacagaaaaagttgttactgttttccttaagatctcttctgtcttcaaagatga gacagtagtaaaaacagcagtgacggaaacaacagatgccttgatgagagaagctttttcatcagccaacttcaattctg atgctttcataacaagtgttttgattcacatgggattgctaaagagtgaagagaaaatcagggctgttccgagtctttat ggccctctaatgacactgaaccacgtggtccagcaggattattttcctaagtcccttgtcccaattctcttggcctttgt cacaaagcctaaccgtgctttggattcctgctcttttgctcgacacttgctattacagacactccaccaattgtaaccca gaggccatgttagttttgtcttggttactttttttaacccaggacttctgtttctcattcattgttcttgaggtttagaa cttatcttcaaatatatttgttggactactcttcggaggtaacagcaaaggtctgaagcttccttgcaagtgcattatgt tatgagcctagtggggaggttgttttcctccagatgcaggccatcacaagacatttttattatttcttgctcttagtttc aggctattctgtggcaatgtagtatatttttttgaccaagaatatttcatatggaatccttcaccattactcattgagct aataagctcaatactccttcaccattactcatttccactaataagattactggtggcctgcaaatgactgttagtgaaaa ctgccttacaaatataaatctgcctaattaaaatagtagttcagaataaatgtaatcaattttgactgtcct |
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| Transcript ID | habu1_s1233_g04253.t3 |
| Definition | - |
>habu1_s1233_g04253.t3 cgcacgcagaagggcggacagttgattagcttgacttattcgagggttgttggccctcgttgctctttacgagtgaggcc agcctggcccgggagattaggctgggttatgtaaattaggagcgcacgtaggaactggcatttcggaatgaggacttcgg ggatgaaatctatcccatctgatattagcaacagttggcacactcaaaaaatggcatcagaagatataactaagcttgca gaatcacttgctaaaacccaagtgggtggaggtcagctgagctttaaaggcaaaagtttgaaactcaatactgcagaaga tgctgaagaggtgatcaaagagattgaggagtttgatgggctagaagccctgcgtttggaaggaaatactgtgggggttg aagcagcaaaagtcattgccaaggctctggagaacaaatctcagctcaagaggtgtcattggagtgatatgttcaccggg agactgagatctgagattccccctgctttgatttctcttggagaagccctcatttctgctggctgccaacttgtagagct ggatctgagtgataatgcctttggaccagatggagtccgtggatttgaggcattgctgaagagtcctacctgttttactc tgcaggaactcaagttaaacaactgtggcatgggcattggtggtggcaagatcttagcaggagctctgaaagaatgtcac aggaaatcaactgctcgaagcaagccattggctctgaaagtatttatggctggcaggaaccgtctggaaaatgatggtgc aactgctcttgctgaggcatttgcagtgattgggactttggaagacatccatatgccacagaatggaatcactcatccag gaattacagccttagctgaggcctttgctgtcaatcccctgctgagagtgattaatttgaatgataatactttcactgag aagggagctgtggctatggcagaaaccttaaagaaactccgccaagtggaaacaatcaactttggggattgtctggtgcg ttcaaaaggtgctgttgccattgctgaagctgtcagtgaaggtcttcataaactaaaggaactcaacttatccttctgtg agatcaagttagatgctgcacttataattgctgaagctactgaggacaagtcagtgctggagaagttagatctcaatggc aattattttggagaagaaggctgtgaacagctccaggagattcttgaaagtttcaatatggcagatgtcctaggctccct gagtgatgatgatggagaaaatggagaagaggaggaagaggaagaagaagaagaagaggaggaggaggaagaggaggagg aagaagaagaggaggaggaagaggaagaggaagaagagcctcttcaggtgcaggagaggggacagggagaacaagaaccc cttacacctaaaaaaatcttaaaggaacatgattctacaccaccattatcttctccttctcttcctcctgttgatgttgg cacctttctagctttcccatctccagagaaattgttgcgacttggccccaagtgttcgactttgataactcagcagacag atacatctgacacagaaaaagttgttactgttttccttaagatctcttctgtcttcaaagatgagacagtagtaaaaaca gcagtgacggaaacaacagatgccttgatgagagaagctttttcatcagccaacttcaattctgatgctttcataacaag tgttttgattcacatgggattgctaaagagtgaagagaaaatcagggctgttccgagtctttatggccctctaatgacac tgaaccacgtggtccagcaggattattttcctaagtcccttgtcccaattctcttggcctttgtcacaaagcctaaccgt gctttggattcctgctcttttgctcgacacttgctattacagacactccaccaattgtaacccagaggccatgttagttt tgtcttggttactttttttaacccaggacttctgtttctcattcattgttcttgaggtttagaacttatcttcaaatata tttgttggactactcttcggaggtaacagcaaaggtctgaagcttccttgcaagtgcattatgttatgagcctagtgggg aggttgttttcctccagatgcaggccatcacaagacatttttattatttcttgctcttagtttcaggctattctgtggca atgtagtatatttttttgaccaagaatatttcatatggaatccttcaccattactcattgagctaataagctcaatactc cttcaccattactcatttccactaataagattactggtggcctgcaaatgactgttagtgaaaactgccttacaaatata aatctgcctaattaaaatagtagttcagaataaatgtaatcaattttgactgtcct |
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Protein
| Protein ID | habu1_s1233_g04253.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04253.t1 MASEDITKLAESLAKTQVGGGQLSFKGKSLKLNTAEDAEEVIKEIEEFDGLEALRLEGNTVGVEAAKVIAKALENKSQLK RCHWSDMFTGRLRSEIPPALISLGEALISAGCQLVELDLSDNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGK ILAGALKECHRKSTARSKPLALKVFMAGRNRLENDGATALAEAFAVIGTLEDIHMPQNGITHPGITALAEAFAVNPLLRV INLNDNTFTEKGAVAMAETLKKLRQVETINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCEIKLDAALIIAEATEDK SVLEKLDLNGNYFGEEGCEQLQEILESFNMADVLGSLSDDDGENGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEPLQV QERGQGEQEPLTPKKILKEHDSTPPLSSPSLPPVDVGTFLAFPSPEKLLRLGPKCSTLITQQTDTSDTEKVVTVFLKISS VFKDETVVKTAVTETTDALMREAFSSANFNSDAFITSVLIHMGLLKSEEKIRAVPSLYGPLMTLNHVVQQDYFPKSLVPI LLAFVTKPNRALDSCSFARHLLLQTLHQL |
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| Protein ID | habu1_s1233_g04253.t2 |
| Definition | - |
>habu1_s1233_g04253.t2 MASEDITKLAESLAKTQVGGGQLSFKGKSLKLNTAEDAEEVIKEIEEFDGLEALRLEGNTVGVEAAKVIAKALENKSQLK RCHWSDMFTGRLRSEIPPALISLGEALISAGCQLVELDLSDNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGK ILAGALKECHRKSTARSKPLALKVFMAGRNRLENDGATALAEAFAVIGTLEDIHMPQNGITHPGITALAEAFAVNPLLRV INLNDNTFTEKGAVAMAETLKKLRQVETINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCEIKLDAALIIAEATEDK SVLEKLDLNGNYFGEEGCEQLQEILESFNMADVLGSLSDDDGENGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEPLQV QERGQGEQEPLTPKKILKEHDSTPPLSSPSLPPVDVGTFLAFPSPEKLLRLGPKCSTLITQQTDTSDTEKVVTVFLKISS VFKDETVVKTAVTETTDALMREAFSSANFNSDAFITSVLIHMGLLKSEEKIRAVPSLYGPLMTLNHVVQQDYFPKSLVPI LLAFVTKPNRALDSCSFARHLLLQTLHQL |
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| Protein ID | habu1_s1233_g04253.t3 |
| Definition | - |
>habu1_s1233_g04253.t3 MKSIPSDISNSWHTQKMASEDITKLAESLAKTQVGGGQLSFKGKSLKLNTAEDAEEVIKEIEEFDGLEALRLEGNTVGVE AAKVIAKALENKSQLKRCHWSDMFTGRLRSEIPPALISLGEALISAGCQLVELDLSDNAFGPDGVRGFEALLKSPTCFTL QELKLNNCGMGIGGGKILAGALKECHRKSTARSKPLALKVFMAGRNRLENDGATALAEAFAVIGTLEDIHMPQNGITHPG ITALAEAFAVNPLLRVINLNDNTFTEKGAVAMAETLKKLRQVETINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCE IKLDAALIIAEATEDKSVLEKLDLNGNYFGEEGCEQLQEILESFNMADVLGSLSDDDGENGEEEEEEEEEEEEEEEEEEE EEEEEEEEEEEEPLQVQERGQGEQEPLTPKKILKEHDSTPPLSSPSLPPVDVGTFLAFPSPEKLLRLGPKCSTLITQQTD TSDTEKVVTVFLKISSVFKDETVVKTAVTETTDALMREAFSSANFNSDAFITSVLIHMGLLKSEEKIRAVPSLYGPLMTL NHVVQQDYFPKSLVPILLAFVTKPNRALDSCSFARHLLLQTLHQL |
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