Gene
Gene Model ID | habu1_s1233_g04253 |
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Locus | habu1_scaffold1233 : 410101 ... 428555 : - |
To GenomeBrowser | habu1_scaffold1233:410101..428555 |
Genes list of scaffold | habu1_scaffold1233 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s1233_g04253.t3 | 1 | 1 | RanGAP1_C | 434 | 604 | 0.0 | 263.7 | 0.0 | 0.0 | 262.6 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 5.2 |
Venom grand-1 | 2.4 |
Pit, infrared sensing | 4.9 |
Nose | 4.9 |
Brain-1 | 4.2 |
Eye | 4.0 |
fetal fibroblast | 21.3 |
venom gland-2 | 11.0 |
Brain-2 | 4.3 |
Spleen | 3.0 |
Lung | 3.2 |
Liver | 1.2 |
Kidney | 2.0 |
Pancreas | 1.0 |
Small intestine | 1.5 |
Large intestine | 2.9 |
Stomach | 2.8 |
heart | 3.6 |
ovary | 37.0 |
cheek muscle | 4.9 |
Transcript
Transcript ID | habu1_s1233_g04253.t1 |
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Definition | - |
>habu1_s1233_g04253.t1 cgcacgcagaagggcggacagttgattagcttgacttattcgagggttgttgaatctatcccatctgatattagcaacag ttggcacactcaaaaaatggcatcagaagatataactaagcttgcagaatcacttgctaaaacccaagtgggtggaggtc agctgagctttaaaggcaaaagtttgaaactcaatactgcagaagatgctgaagaggtgatcaaagagattgaggagttt gatgggctagaagccctgcgtttggaaggaaatactgtgggggttgaagcagcaaaagtcattgccaaggctctggagaa caaatctcagctcaagaggtgtcattggagtgatatgttcaccgggagactgagatctgagattccccctgctttgattt ctcttggagaagccctcatttctgctggctgccaacttgtagagctggatctgagtgataatgcctttggaccagatgga gtccgtggatttgaggcattgctgaagagtcctacctgttttactctgcaggaactcaagttaaacaactgtggcatggg cattggtggtggcaagatcttagcaggagctctgaaagaatgtcacaggaaatcaactgctcgaagcaagccattggctc tgaaagtatttatggctggcaggaaccgtctggaaaatgatggtgcaactgctcttgctgaggcatttgcagtgattggg actttggaagacatccatatgccacagaatggaatcactcatccaggaattacagccttagctgaggcctttgctgtcaa tcccctgctgagagtgattaatttgaatgataatactttcactgagaagggagctgtggctatggcagaaaccttaaaga aactccgccaagtggaaacaatcaactttggggattgtctggtgcgttcaaaaggtgctgttgccattgctgaagctgtc agtgaaggtcttcataaactaaaggaactcaacttatccttctgtgagatcaagttagatgctgcacttataattgctga agctactgaggacaagtcagtgctggagaagttagatctcaatggcaattattttggagaagaaggctgtgaacagctcc aggagattcttgaaagtttcaatatggcagatgtcctaggctccctgagtgatgatgatggagaaaatggagaagaggag gaagaggaagaagaagaagaagaggaggaggaggaagaggaggaggaagaagaagaggaggaggaagaggaagaggaaga agagcctcttcaggtgcaggagaggggacagggagaacaagaaccccttacacctaaaaaaatcttaaaggaacatgatt ctacaccaccattatcttctccttctcttcctcctgttgatgttggcacctttctagctttcccatctccagagaaattg ttgcgacttggccccaagtgttcgactttgataactcagcagacagatacatctgacacagaaaaagttgttactgtttt ccttaagatctcttctgtcttcaaagatgagacagtagtaaaaacagcagtgacggaaacaacagatgccttgatgagag aagctttttcatcagccaacttcaattctgatgctttcataacaagtgttttgattcacatgggattgctaaagagtgaa gagaaaatcagggctgttccgagtctttatggccctctaatgacactgaaccacgtggtccagcaggattattttcctaa gtcccttgtcccaattctcttggcctttgtcacaaagcctaaccgtgctttggattcctgctcttttgctcgacacttgc tattacagacactccaccaattgtaacccagaggccatgttagttttgtcttggttactttttttaacccaggacttctg tttctcattcattgttcttgaggtttagaacttatcttcaaatatatttgttggactactcttcggaggtaacagcaaag gtctgaagcttccttgcaagtgcattatgttatgagcctagtggggaggttgttttcctccagatgcaggccatcacaag acatttttattatttcttgctcttagtttcaggctattctgtggcaatgtagtatatttttttgaccaagaatatttcat atggaatccttcaccattactcattgagctaataagctcaatactccttcaccattactcatttccactaataagattac tggtggcctgcaaatgactgttagtgaaaactgccttacaaatataaatctgcctaattaaaatagtagttcagaataaa tgtaatcaattttgactgtcct |
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Transcript ID | habu1_s1233_g04253.t2 |
Definition | - |
>habu1_s1233_g04253.t2 cgcacgcagaagggcggacagttgattagcttgacttattcgagggttgttgcaagctttcagcctagtatttaactgtt cagtggcatattatcatgtaagaatctatcccatctgatattagcaacagttggcacactcaaaaaatggcatcagaaga tataactaagcttgcagaatcacttgctaaaacccaagtgggtggaggtcagctgagctttaaaggcaaaagtttgaaac tcaatactgcagaagatgctgaagaggtgatcaaagagattgaggagtttgatgggctagaagccctgcgtttggaagga aatactgtgggggttgaagcagcaaaagtcattgccaaggctctggagaacaaatctcagctcaagaggtgtcattggag tgatatgttcaccgggagactgagatctgagattccccctgctttgatttctcttggagaagccctcatttctgctggct gccaacttgtagagctggatctgagtgataatgcctttggaccagatggagtccgtggatttgaggcattgctgaagagt cctacctgttttactctgcaggaactcaagttaaacaactgtggcatgggcattggtggtggcaagatcttagcaggagc tctgaaagaatgtcacaggaaatcaactgctcgaagcaagccattggctctgaaagtatttatggctggcaggaaccgtc tggaaaatgatggtgcaactgctcttgctgaggcatttgcagtgattgggactttggaagacatccatatgccacagaat ggaatcactcatccaggaattacagccttagctgaggcctttgctgtcaatcccctgctgagagtgattaatttgaatga taatactttcactgagaagggagctgtggctatggcagaaaccttaaagaaactccgccaagtggaaacaatcaactttg gggattgtctggtgcgttcaaaaggtgctgttgccattgctgaagctgtcagtgaaggtcttcataaactaaaggaactc aacttatccttctgtgagatcaagttagatgctgcacttataattgctgaagctactgaggacaagtcagtgctggagaa gttagatctcaatggcaattattttggagaagaaggctgtgaacagctccaggagattcttgaaagtttcaatatggcag atgtcctaggctccctgagtgatgatgatggagaaaatggagaagaggaggaagaggaagaagaagaagaagaggaggag gaggaagaggaggaggaagaagaagaggaggaggaagaggaagaggaagaagagcctcttcaggtgcaggagaggggaca gggagaacaagaaccccttacacctaaaaaaatcttaaaggaacatgattctacaccaccattatcttctccttctcttc ctcctgttgatgttggcacctttctagctttcccatctccagagaaattgttgcgacttggccccaagtgttcgactttg ataactcagcagacagatacatctgacacagaaaaagttgttactgttttccttaagatctcttctgtcttcaaagatga gacagtagtaaaaacagcagtgacggaaacaacagatgccttgatgagagaagctttttcatcagccaacttcaattctg atgctttcataacaagtgttttgattcacatgggattgctaaagagtgaagagaaaatcagggctgttccgagtctttat ggccctctaatgacactgaaccacgtggtccagcaggattattttcctaagtcccttgtcccaattctcttggcctttgt cacaaagcctaaccgtgctttggattcctgctcttttgctcgacacttgctattacagacactccaccaattgtaaccca gaggccatgttagttttgtcttggttactttttttaacccaggacttctgtttctcattcattgttcttgaggtttagaa cttatcttcaaatatatttgttggactactcttcggaggtaacagcaaaggtctgaagcttccttgcaagtgcattatgt tatgagcctagtggggaggttgttttcctccagatgcaggccatcacaagacatttttattatttcttgctcttagtttc aggctattctgtggcaatgtagtatatttttttgaccaagaatatttcatatggaatccttcaccattactcattgagct aataagctcaatactccttcaccattactcatttccactaataagattactggtggcctgcaaatgactgttagtgaaaa ctgccttacaaatataaatctgcctaattaaaatagtagttcagaataaatgtaatcaattttgactgtcct |
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Transcript ID | habu1_s1233_g04253.t3 |
Definition | - |
>habu1_s1233_g04253.t3 cgcacgcagaagggcggacagttgattagcttgacttattcgagggttgttggccctcgttgctctttacgagtgaggcc agcctggcccgggagattaggctgggttatgtaaattaggagcgcacgtaggaactggcatttcggaatgaggacttcgg ggatgaaatctatcccatctgatattagcaacagttggcacactcaaaaaatggcatcagaagatataactaagcttgca gaatcacttgctaaaacccaagtgggtggaggtcagctgagctttaaaggcaaaagtttgaaactcaatactgcagaaga tgctgaagaggtgatcaaagagattgaggagtttgatgggctagaagccctgcgtttggaaggaaatactgtgggggttg aagcagcaaaagtcattgccaaggctctggagaacaaatctcagctcaagaggtgtcattggagtgatatgttcaccggg agactgagatctgagattccccctgctttgatttctcttggagaagccctcatttctgctggctgccaacttgtagagct ggatctgagtgataatgcctttggaccagatggagtccgtggatttgaggcattgctgaagagtcctacctgttttactc tgcaggaactcaagttaaacaactgtggcatgggcattggtggtggcaagatcttagcaggagctctgaaagaatgtcac aggaaatcaactgctcgaagcaagccattggctctgaaagtatttatggctggcaggaaccgtctggaaaatgatggtgc aactgctcttgctgaggcatttgcagtgattgggactttggaagacatccatatgccacagaatggaatcactcatccag gaattacagccttagctgaggcctttgctgtcaatcccctgctgagagtgattaatttgaatgataatactttcactgag aagggagctgtggctatggcagaaaccttaaagaaactccgccaagtggaaacaatcaactttggggattgtctggtgcg ttcaaaaggtgctgttgccattgctgaagctgtcagtgaaggtcttcataaactaaaggaactcaacttatccttctgtg agatcaagttagatgctgcacttataattgctgaagctactgaggacaagtcagtgctggagaagttagatctcaatggc aattattttggagaagaaggctgtgaacagctccaggagattcttgaaagtttcaatatggcagatgtcctaggctccct gagtgatgatgatggagaaaatggagaagaggaggaagaggaagaagaagaagaagaggaggaggaggaagaggaggagg aagaagaagaggaggaggaagaggaagaggaagaagagcctcttcaggtgcaggagaggggacagggagaacaagaaccc cttacacctaaaaaaatcttaaaggaacatgattctacaccaccattatcttctccttctcttcctcctgttgatgttgg cacctttctagctttcccatctccagagaaattgttgcgacttggccccaagtgttcgactttgataactcagcagacag atacatctgacacagaaaaagttgttactgttttccttaagatctcttctgtcttcaaagatgagacagtagtaaaaaca gcagtgacggaaacaacagatgccttgatgagagaagctttttcatcagccaacttcaattctgatgctttcataacaag tgttttgattcacatgggattgctaaagagtgaagagaaaatcagggctgttccgagtctttatggccctctaatgacac tgaaccacgtggtccagcaggattattttcctaagtcccttgtcccaattctcttggcctttgtcacaaagcctaaccgt gctttggattcctgctcttttgctcgacacttgctattacagacactccaccaattgtaacccagaggccatgttagttt tgtcttggttactttttttaacccaggacttctgtttctcattcattgttcttgaggtttagaacttatcttcaaatata tttgttggactactcttcggaggtaacagcaaaggtctgaagcttccttgcaagtgcattatgttatgagcctagtgggg aggttgttttcctccagatgcaggccatcacaagacatttttattatttcttgctcttagtttcaggctattctgtggca atgtagtatatttttttgaccaagaatatttcatatggaatccttcaccattactcattgagctaataagctcaatactc cttcaccattactcatttccactaataagattactggtggcctgcaaatgactgttagtgaaaactgccttacaaatata aatctgcctaattaaaatagtagttcagaataaatgtaatcaattttgactgtcct |
Protein
Protein ID | habu1_s1233_g04253.t1 |
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Definition | - |
>habu1_s1233_g04253.t1 MASEDITKLAESLAKTQVGGGQLSFKGKSLKLNTAEDAEEVIKEIEEFDGLEALRLEGNTVGVEAAKVIAKALENKSQLK RCHWSDMFTGRLRSEIPPALISLGEALISAGCQLVELDLSDNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGK ILAGALKECHRKSTARSKPLALKVFMAGRNRLENDGATALAEAFAVIGTLEDIHMPQNGITHPGITALAEAFAVNPLLRV INLNDNTFTEKGAVAMAETLKKLRQVETINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCEIKLDAALIIAEATEDK SVLEKLDLNGNYFGEEGCEQLQEILESFNMADVLGSLSDDDGENGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEPLQV QERGQGEQEPLTPKKILKEHDSTPPLSSPSLPPVDVGTFLAFPSPEKLLRLGPKCSTLITQQTDTSDTEKVVTVFLKISS VFKDETVVKTAVTETTDALMREAFSSANFNSDAFITSVLIHMGLLKSEEKIRAVPSLYGPLMTLNHVVQQDYFPKSLVPI LLAFVTKPNRALDSCSFARHLLLQTLHQL |
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Protein ID | habu1_s1233_g04253.t2 |
Definition | - |
>habu1_s1233_g04253.t2 MASEDITKLAESLAKTQVGGGQLSFKGKSLKLNTAEDAEEVIKEIEEFDGLEALRLEGNTVGVEAAKVIAKALENKSQLK RCHWSDMFTGRLRSEIPPALISLGEALISAGCQLVELDLSDNAFGPDGVRGFEALLKSPTCFTLQELKLNNCGMGIGGGK ILAGALKECHRKSTARSKPLALKVFMAGRNRLENDGATALAEAFAVIGTLEDIHMPQNGITHPGITALAEAFAVNPLLRV INLNDNTFTEKGAVAMAETLKKLRQVETINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCEIKLDAALIIAEATEDK SVLEKLDLNGNYFGEEGCEQLQEILESFNMADVLGSLSDDDGENGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEPLQV QERGQGEQEPLTPKKILKEHDSTPPLSSPSLPPVDVGTFLAFPSPEKLLRLGPKCSTLITQQTDTSDTEKVVTVFLKISS VFKDETVVKTAVTETTDALMREAFSSANFNSDAFITSVLIHMGLLKSEEKIRAVPSLYGPLMTLNHVVQQDYFPKSLVPI LLAFVTKPNRALDSCSFARHLLLQTLHQL |
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Protein ID | habu1_s1233_g04253.t3 |
Definition | - |
>habu1_s1233_g04253.t3 MKSIPSDISNSWHTQKMASEDITKLAESLAKTQVGGGQLSFKGKSLKLNTAEDAEEVIKEIEEFDGLEALRLEGNTVGVE AAKVIAKALENKSQLKRCHWSDMFTGRLRSEIPPALISLGEALISAGCQLVELDLSDNAFGPDGVRGFEALLKSPTCFTL QELKLNNCGMGIGGGKILAGALKECHRKSTARSKPLALKVFMAGRNRLENDGATALAEAFAVIGTLEDIHMPQNGITHPG ITALAEAFAVNPLLRVINLNDNTFTEKGAVAMAETLKKLRQVETINFGDCLVRSKGAVAIAEAVSEGLHKLKELNLSFCE IKLDAALIIAEATEDKSVLEKLDLNGNYFGEEGCEQLQEILESFNMADVLGSLSDDDGENGEEEEEEEEEEEEEEEEEEE EEEEEEEEEEEEPLQVQERGQGEQEPLTPKKILKEHDSTPPLSSPSLPPVDVGTFLAFPSPEKLLRLGPKCSTLITQQTD TSDTEKVVTVFLKISSVFKDETVVKTAVTETTDALMREAFSSANFNSDAFITSVLIHMGLLKSEEKIRAVPSLYGPLMTL NHVVQQDYFPKSLVPILLAFVTKPNRALDSCSFARHLLLQTLHQL |