Gene
| Gene Model ID | habu1_s1233_g04254 |
|---|---|
| Locus | habu1_scaffold1233 : 434116 ... 474371 : + |
| To GenomeBrowser | habu1_scaffold1233:434116..474371 |
| Genes list of scaffold | habu1_scaffold1233 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger ccch domain-containing protein 7b isoform x4 | GO:0044822 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1233_g04254.t1 | 2 | 1 | TPR_11 | 37 | 109 | 4.9e-12 | 45.3 | 4.3e-12 | 4.9e-09 | 35.7 |
| habu1_s1233_g04254.t1 | 1 | 1 | TPR_1 | 83 | 114 | 1.1e-09 | 37.4 | 3.4e-07 | 0.00038 | 19.9 |
| habu1_s1233_g04254.t1 | 2 | 2 | TPR_11 | 93 | 143 | 4.9e-12 | 45.3 | 1.0e-07 | 0.00012 | 21.6 |
| habu1_s1233_g04254.t1 | 2 | 1 | zf-CCCH | 810 | 834 | 9.1e-11 | 41.1 | 4.5e-07 | 0.00052 | 19.6 |
| habu1_s1233_g04254.t1 | 2 | 2 | zf-CCCH | 942 | 965 | 9.1e-11 | 41.1 | 3.4e-07 | 0.00039 | 20.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1233_g04254.t1 | gi|602637810|ref|XP_007425744.1| | PREDICTED: zinc finger CCCH domain-containing protein 7B isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1233_g04254.t1 | gi|602637814|ref|XP_007425746.1| | PREDICTED: zinc finger CCCH domain-containing protein 7B isoform X3 [Python bivittatus] | 0.0 |
| habu1_s1233_g04254.t1 | gi|602637812|ref|XP_007425745.1| | PREDICTED: zinc finger CCCH domain-containing protein 7B isoform X2 [Python bivittatus] | 0.0 |
| habu1_s1233_g04254.t1 | gi|637301250|ref|XP_008108952.1| | PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 7B [Anolis carolinensis] | 0.0 |
| habu1_s1233_g04254.t1 | gi|686587702|ref|XP_009288289.1| | PREDICTED: zinc finger CCCH domain-containing protein 7B isoform X4 [Aptenodytes forsteri] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.3 |
| Venom grand-1 | 6.2 |
| Pit, infrared sensing | 6.9 |
| Nose | 4.4 |
| Brain-1 | 6.4 |
| Eye | 4.6 |
| fetal fibroblast | 11.3 |
| venom gland-2 | 12.7 |
| Brain-2 | 5.9 |
| Spleen | 11.8 |
| Lung | 2.9 |
| Liver | 4.0 |
| Kidney | 5.6 |
| Pancreas | 13.3 |
| Small intestine | 13.0 |
| Large intestine | 8.8 |
| Stomach | 10.6 |
| heart | 5.6 |
| ovary | 14.3 |
| cheek muscle | 10.0 |
Transcript
| Transcript ID | habu1_s1233_g04254.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04254.t1 ggggattgtaagctgccttgccagtttttactaaaaacattcattatatgcaatttaagtgaaagaaaaactgccgacgc gtatgagtgggtcctgcttaaagtgatgcaatggaaagacaaaaaagaaaagaagagatagagaaaggtcttcagttcat ccagtctacattaccattaagccaagaagattatgaggcctttttacaaaaattggtgcaaaacttacttgcagagggca atgatttattcagagagaaggattataagctggcactggtgcagtatgttgaagggctaaatgtgtctgaatatgcagct tcagatgaagtgaacattcctgcagatcttttatgcaaactacatgtcaatcgagctgcctgctacttcgcaatgggctt acatgaaaaagctttagaagacagtgagaaggctctgggattcaacaaggagaacacccgtgctctctttcggaaggccc gctgcttaagtgagctaggaagacacaaggaagcttatgaatgtaacagccgctgtttgctctcactcccacatgatgaa agtgtggtccagttgggtcaggaccttgcacagaagctgggattaagagtccggaaagcatataagaggcctcagcagga ttcagaaacattttgtgtattgagtaatggcctgacatctgccttaccaaatcagaccaatggattaggctccatagacg acattgaaacagacaattctgtggtccttcagtgcatcgtcactcctagtggtgcttctgtcactgccagcaaagccaat gccttttcatcaactgacttggaaacgaaaagcctgccaagatcactccttgctactaccctgctcccttctacagatgt tgcatctataccagagtctgacagtgtagacgacttcactgaaggagaagttcttggagatgaactggactcaattctgg attctattgcagatgggtcccagtatccattatctcttgtccgtggtgccattcctgccaatctgccaagtgaggtgccc cagctcatccctgtgtttccaggtggtactccacttcttcctcctgtggtgacggcaaacattccagtctccacaccgct gccacctgcctcctttggcctagtgatggaggctacaaagcagctctcttcttcatctgttctggatacctttgaaacac ccgttgggggcagtggcacgtctcctttggattcactggattcactagatctgctcccatacacagagtctcggctggat gtgttagatgcttttggaaccagtaggggatcattggatgctttagatacctttactgttgaggaaaccagcacccaaga accccgccaacctgctggaattcaaaagtcactaccagttgcaaaccaaactgggtcaagtacccacaccacagtaccca aagttgtagagttgtttatgtctcagccggaattgatgatgtccaacacaactctgcttgtgaagaatcccttggtgtcc actcacattttcaaacaggcctgtcacatctgctatcccaaaacaggtcccaaagctggtgattatacttatcgagaagg tctggaacataagtgcaagcgagacatactgctgggcaggcgtcgtttatccgaagataaaacatggaagagaattcgcc cacgtccaaccaagacaaactttgtgggatcctattatctatgcaaagatatgcttaacaagcaggactgtaagtacggg gataactgcaccttcgcgtaccaccaggaggagatcgatgtgtggacagaggagcgaaaggggacactcaatcgcgacct cttgtttgatccactgggtgggatcaaacgaggtaacctgactattaccaagatcctgaaagaacaccagggcatattca cctttctttgtgagatctgctttgatagcaaaccccgaataatcagcaaagggctcaaggactctccagcagtatgctcc aatctagctgcaaaacataatttttatgataataagtgtctggttcatattgttcgttccacctctctaaaatactctaa aattcgccagtttcaggagcattttcagtttgatgtctgcaggcatgaagtgcgttatggctgcttgcgtgaagatagtt gccattttgctcacagctttatagagcttaaggtttggctgctgcagcagtattctggaatgacccatgaagatattgta caagaatctaaaaaatattggcagcaaatggaggcacatgctagcaaaaccaacaacaatatggcatctgtcagaactcc catttccaacacttttgaccttcagatgaaatttgtgtgtggccagtgttggagaaatggacaagttgtggaaccagaca aagacctcaaatactgtagtgccaaagcacaccattgttggaccaaggagcgccgcgtcctgctggtgatgtccaaagca aaaaaaaagtgggtatctgttcgacccctgccttctatccgcaatttccctcagcaatatgatctctgtattcatgccca aaatggtaggaaatgccagtatgttggaaattgctcctttgcccatagccctgaagagagagagatgtggaccttcatga aagaaaataagattttggatatgcagcagacttatgacatgtggctgaaaaagcataaccctggaaagcctggagaggga acacctctaacatcacgagaaggagaaaagcagatccagatgcccactgactatgctgacatgatgggttaccattgctg gctttgtggaaagaacagcaacagtaagaagcagtggcagcagcacatccagtctgagaagcataaagagaaagtcttta catctgacaatgactccagctgctggaattaccgtttcccaatgggagagtttcggctgtgtgaaaggttccagaagaca aaaggctgtcccgaaggagagaaatgttactttgctcatggacaagatgagttgacagaatggcttgatcgcagggaagt aatgaagcagaaactggctaaagctcgaaaggatatgctgttgtgccctcgagatgatgactttggcaaatacaactttc tattacgagatagtatataattctgggtagtggtggaaacgagcagacttttcagaacttgagtaaaacgaagcttgggc agctacaaagagcctgataattgttccaatactgtggctttgattgtaagataatcaaaatgattcactgatgttgaatg gaattaaggattgaatcatctgtagccagtggacacaatgcttctatcattttgttttcaaaattattttggtcgattac cagcttcttcttttttcttttataaaagagaagatgttcttccttttaattttccagccaattcttattttgaacattta atttttgatgggataatatggtattacagaagcaagcttagaacgaggagatatgtcagagatgcagggttttgttcaag ctaaacttgtgtgttaggcctttctggtcacaaaccatagtgttgaaattaacaatacaaaatgttgaatatgaataaga tataagcttccaccacttcaatctgattctaaaacgttcagattattctggtagttgcttttaaataatagtagtaaagt atttactatttaatacgactaagtgataattaaagaaatactagtaaagaatacattaagtctctttctccttatagcca ggattccatcacagattaaagcagacaaagaattttaatcctgtcacatgacattagaaaagcaattggctgtctttgga agcaattaattttttcatatcaaagattattaaaaatacaattgataattgatgat |
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Protein
| Protein ID | habu1_s1233_g04254.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04254.t1 MERQKRKEEIEKGLQFIQSTLPLSQEDYEAFLQKLVQNLLAEGNDLFREKDYKLALVQYVEGLNVSEYAASDEVNIPADL LCKLHVNRAACYFAMGLHEKALEDSEKALGFNKENTRALFRKARCLSELGRHKEAYECNSRCLLSLPHDESVVQLGQDLA QKLGLRVRKAYKRPQQDSETFCVLSNGLTSALPNQTNGLGSIDDIETDNSVVLQCIVTPSGASVTASKANAFSSTDLETK SLPRSLLATTLLPSTDVASIPESDSVDDFTEGEVLGDELDSILDSIADGSQYPLSLVRGAIPANLPSEVPQLIPVFPGGT PLLPPVVTANIPVSTPLPPASFGLVMEATKQLSSSSVLDTFETPVGGSGTSPLDSLDSLDLLPYTESRLDVLDAFGTSRG SLDALDTFTVEETSTQEPRQPAGIQKSLPVANQTGSSTHTTVPKVVELFMSQPELMMSNTTLLVKNPLVSTHIFKQACHI CYPKTGPKAGDYTYREGLEHKCKRDILLGRRRLSEDKTWKRIRPRPTKTNFVGSYYLCKDMLNKQDCKYGDNCTFAYHQE EIDVWTEERKGTLNRDLLFDPLGGIKRGNLTITKILKEHQGIFTFLCEICFDSKPRIISKGLKDSPAVCSNLAAKHNFYD NKCLVHIVRSTSLKYSKIRQFQEHFQFDVCRHEVRYGCLREDSCHFAHSFIELKVWLLQQYSGMTHEDIVQESKKYWQQM EAHASKTNNNMASVRTPISNTFDLQMKFVCGQCWRNGQVVEPDKDLKYCSAKAHHCWTKERRVLLVMSKAKKKWVSVRPL PSIRNFPQQYDLCIHAQNGRKCQYVGNCSFAHSPEEREMWTFMKENKILDMQQTYDMWLKKHNPGKPGEGTPLTSREGEK QIQMPTDYADMMGYHCWLCGKNSNSKKQWQQHIQSEKHKEKVFTSDNDSSCWNYRFPMGEFRLCERFQKTKGCPEGEKCY FAHGQDELTEWLDRREVMKQKLAKARKDMLLCPRDDDFGKYNFLLRDSI |
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