Gene
| Gene Model ID | habu1_s1233_g04262 |
|---|---|
| Locus | habu1_scaffold1233 : 659607 ... 671077 : - |
| To GenomeBrowser | habu1_scaffold1233:659607..671077 |
| Genes list of scaffold | habu1_scaffold1233 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| desumoylating isopeptidase 1 | GO:0042802 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1233_g04262.t3 | 1 | 1 | Peptidase_C97 | 8 | 140 | 2.2e-40 | 137.8 | 1.68156e-44 | 2.4e-40 | 137.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1233_g04262.t3 | gi|530626243|ref|XP_005302657.1| | PREDICTED: desumoylating isopeptidase 1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.6 |
| Venom grand-1 | 4.3 |
| Pit, infrared sensing | 4.6 |
| Nose | 3.5 |
| Brain-1 | 13.5 |
| Eye | 8.6 |
| fetal fibroblast | 6.9 |
| venom gland-2 | 6.5 |
| Brain-2 | 14.3 |
| Spleen | 2.8 |
| Lung | 3.1 |
| Liver | 3.1 |
| Kidney | 3.2 |
| Pancreas | 4.5 |
| Small intestine | 2.3 |
| Large intestine | 2.4 |
| Stomach | 2.8 |
| heart | 9.4 |
| ovary | 8.2 |
| cheek muscle | 2.3 |
Transcript
| Transcript ID | habu1_s1233_g04262.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04262.t1 ctccgccccttttcagtcaccttctgtcagttgcggcctcgccagagaaggtcgaattggttttgaagttgttttttttt tgcaagccccccttcccgcttcctcggccgatgtcatggactcgcctccgatgctgcactcggtgaagctctacgtgtac gacctgtccaagggcatggctcgccgcctcagtcctatcatgctcggtaagcaactagagggcatctggcacacctccat agttgcccacagggatgaattcttctatggtagtgggggaatttcaagttgtccacctggtggaacactgcttgggcctc cagattctattgtagatctgggatatactgaagtttcagaagacctcttcttagaatatttgtcctcattgggggaatct atattccgaggagactcctataatctttttgatcataattgtaatacattcagcaatgaagtggcacaattcttgacagg gagaaagatcccttcctacattacagatcttccatctgaagtccttgcaacaccatttggacaagcattacgaccacttc ttgactccatccagatccagccacctggaggaaatacttttagcagacataatggacagagctagcaaacacaatgaaaa atatctcaattcacaagggcatttccttttaaaactctactgtattagatacctatcttataaattcatgccatggttca aaagtggcatttcggacttgatagggagaatatttattgaattgcatgtcatgtggtgatatcagaagaaatatggtcat aaaatcaaataatgtatttgcttattaaatttgtttttgtcttggttcactttttttactatcccctactgagaaagtag aaattaggaaatccacctgcacaaactaaagtaacagggatatcttagccatctcttcccaaatgtactaatttcattac cattgttgcaatattttctaacctcaaagttgtaaatttaacaatattaaacaataagcttgaacatgctttaaattttt tataggagaaaaaaaactaaaaacattcactgagaaattattttgagtcatacttcttaaacagaaaatataagccagtc tgcaatagaaataaatatacacagtaatagatttctaagtgtggattgttgataccaaaataaccctctattgcttattt tgaaaatctgatcttttcaataccagatagaatagccttaacccttgtgctatgttaatcttttgtatgttaaaaaaatg tacaatgggtagaaatgaaggtcttactgtaagcagtgacaccatattttaaggaaggcgaaattaattttactaataca acaaataactgatataattttcaaaaaacatgcaatgtacaactttcagattaatagtatagataagtaattttcaattc tagaagtacatccaaaatcaatgttaagacctattatttaagtctgagatttaaatctataaatatagttgtattggtta tatccattcctataaacaccctcttctccatatgctaacatccaggttgaatgaggagcatcttgtagctgtttttttta aaacaacaaaaattatttatttaaccaggttttgggcccacttcattttttcctgtaaatacttataacagaacactaga atcagtttgaggagcaaacaagtataatatgcctttctttattctctgctgagcatgattaagaaagcattatatggcaa tgacaactactctctgagaaaacacaaacacacatacctttccctcaatgtcaggctttcattatattaattttttatta attaaattggatatttttcagaaactagaagatctgtgaacttttcctttgagaggctattaatttgtctccactttctc ctaatacttggtaagaacatagaaaatctgctaatactcagagataatattcacttgtacaatatatcaactataaaata caaacctaataaagtaactacagtagattgtagtc |
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| Transcript ID | habu1_s1233_g04262.t2 |
| Definition | - |
>habu1_s1233_g04262.t2 ctccgccccttttcagtcaccttctgtcagttgcggcctcgccagagaaggtcgaattggttttgaagttgttttttttt tgcaagccccccttcccgcttcctcggccgatgtcatggactcgcctccgatgctgcactcggtgaagctctacgtgtac gacctgtccaagggcatggctcgccgcctcagtcctatcatgctcggtaagcaactagagggcatctggcacacctccat agttgcccacagggatgaattcttctatggtagtgggggaatttcaagttgtccacctggtggaacactgcttgggcctc cagattctattgtagatctgggatatactgaagtttcagaagacctcttcttagaatatttgtcctcattgggggaatct atattccgaggagactcctataatctttttgatcataattgtaatacattcagcaatgaagtggcacaattcttgacagg gagaaagatcccttcctacattacagatcttccatctgaagtccttgcaacaccatttggacaagcattacgaccacttc ttgactccatccagatccagccacctggaggaaatacttttagcagacataatggacagagctagcaaacacaatgaaaa atatctcaattcacaagggcatttccttttaaaactctactgtattagatacctatcttataaattcatgccatggttca aaagtggcatttcggacttgatagggagaatatttattgaattgcatgtcatgtggtgatatcagaagaaatatggtcat aaaatcaaataatgtatttgcttattaaatttgtttttgtcttggttcact |
|
| Transcript ID | habu1_s1233_g04262.t3 |
| Definition | - |
>habu1_s1233_g04262.t3 ctccgccccttttcagtcaccttctgtcagttgcggcctcgccagagaaggtcgaattggttttgaagttgttttttttt tgcaagccccccttcccgcttcctcggccgatgtcatggactcgcctccgatgctgcactcggtgaagctctacgtgtac gacctgtccaagggcatggctcgccgcctcagtcctatcatgctcggtaagcaactagagggcatctggcacacctccat agttgcccacagggatgaattcttctatggtagtgggggaatttcaagttgtccacctggtggaacactgcttgggcctc cagattctattgtagatctgggatatactgaagtttcagaagacctcttcttagaatatttgtcctcattgggggaatct atattccgaggagactcctataatctttttgatcataattgtaatacattcagcaatgaagtggcacaattcttgacagg gagaaagatcccttcctacattacagatcttccatctgaagtccttgcaacaagctgcaggaaagtgtagtttcattttt cagtgatgtgccatcaaaatcagcaatctgcaaaaaacggggtccagatagtcctcatttaacaaccatttgaagttatg gcagcactgaatgaatgctacacccagtcccccaagaccatttggacaagcattacgaccacttcttgactccatccaga tccagccacctggaggaaatacttttagcagacataatggacagagctagcaaacacaatgaaaaatatctcaattcaca agggcatttccttttaaaactctactgtattagatacctatcttataaattcatgccatggttcaaaagtggcatttcgg acttgatagggagaatatttattgaattgcatgtcatgtggtgatatcagaagaaatatggtcataaaatcaaataatgt atttgcttattaaatttgtttttgtcttggttcact |
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Protein
| Protein ID | habu1_s1233_g04262.t1 |
|---|---|
| Definition | - |
>habu1_s1233_g04262.t1 MDSPPMLHSVKLYVYDLSKGMARRLSPIMLGKQLEGIWHTSIVAHRDEFFYGSGGISSCPPGGTLLGPPDSIVDLGYTEV SEDLFLEYLSSLGESIFRGDSYNLFDHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLATPFGQALRPLLDSIQIQPPGGN TFSRHNGQS |
|
| Protein ID | habu1_s1233_g04262.t2 |
| Definition | - |
>habu1_s1233_g04262.t2 MDSPPMLHSVKLYVYDLSKGMARRLSPIMLGKQLEGIWHTSIVAHRDEFFYGSGGISSCPPGGTLLGPPDSIVDLGYTEV SEDLFLEYLSSLGESIFRGDSYNLFDHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLATPFGQALRPLLDSIQIQPPGGN TFSRHNGQS |
|
| Protein ID | habu1_s1233_g04262.t3 |
| Definition | - |
>habu1_s1233_g04262.t3 MDSPPMLHSVKLYVYDLSKGMARRLSPIMLGKQLEGIWHTSIVAHRDEFFYGSGGISSCPPGGTLLGPPDSIVDLGYTEV SEDLFLEYLSSLGESIFRGDSYNLFDHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLATSCRKV |
|